RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 KLF18A0A0U1RQI7 1052 aa19.81■□□□□ 0.76
CMTM3-208ENST00000564247 K7ELQ4 463 aaPredicted RBP19.81■□□□□ 0.76
CMTM3-208ENST00000564247 TOP1P11387 765 aaKnown RBP19.81■□□□□ 0.76
CMTM3-208ENST00000564247 ATP2B2Q01814 1243 aa19.81■□□□□ 0.76
CMTM3-208ENST00000564247 ARHGEF6Q15052 776 aa19.81■□□□□ 0.76
CMTM3-208ENST00000564247 CATIPQ7Z7H3 387 aa19.81■□□□□ 0.76
CMTM3-208ENST00000564247 SGMS1Q86VZ5 419 aa19.81■□□□□ 0.76
CMTM3-208ENST00000564247 PROCA1Q8NCQ7 364 aaPredicted RBP19.81■□□□□ 0.76
CMTM3-208ENST00000564247 CHMP4CQ96CF2 233 aa19.81■□□□□ 0.76
CMTM3-208ENST00000564247 ZNF274Q96GC6 653 aaPredicted RBP19.81■□□□□ 0.76
CMTM3-208ENST00000564247 LARP6Q9BRS8 491 aaKnown RBP19.81■□□□□ 0.76
CMTM3-208ENST00000564247 EFCC1Q9HA90 598 aa19.81■□□□□ 0.76
CMTM3-208ENST00000564247 SH2B1Q9NRF2 756 aaPredicted RBP19.81■□□□□ 0.76
CMTM3-208ENST00000564247 CLIP2Q9UDT6 1046 aa19.81■□□□□ 0.76
CMTM3-208ENST00000564247 CD2BP2O95400 341 aaKnown RBP19.8■□□□□ 0.76
CMTM3-208ENST00000564247 EVCP57679 992 aa19.8■□□□□ 0.76
CMTM3-208ENST00000564247 CAP1Q01518 475 aa19.8■□□□□ 0.76
CMTM3-208ENST00000564247 SH3D19Q5HYK7 790 aa19.8■□□□□ 0.76
CMTM3-208ENST00000564247 ARHGEF10LQ9HCE6 1279 aa19.8■□□□□ 0.76
CMTM3-208ENST00000564247 NYAP2Q9P242 653 aa19.8■□□□□ 0.76
CMTM3-208ENST00000564247 AGTPBP1Q9UPW5 1226 aa19.8■□□□□ 0.76
CMTM3-208ENST00000564247 CENPFP49454 3210 aa19.8■□□□□ 0.76
CMTM3-208ENST00000564247 LACTBP83111 547 aaPredicted RBP19.79■□□□□ 0.76
CMTM3-208ENST00000564247 ICA1Q05084 483 aa19.79■□□□□ 0.76
CMTM3-208ENST00000564247 SHROOM1Q2M3G4 852 aaPredicted RBP19.79■□□□□ 0.76
CMTM3-208ENST00000564247 RCSD1Q6JBY9 416 aa19.79■□□□□ 0.76
CMTM3-208ENST00000564247 TMEM47Q9BQJ4 181 aa19.79■□□□□ 0.76
CMTM3-208ENST00000564247 SLKQ9H2G2 1235 aaPredicted RBP19.79■□□□□ 0.76
CMTM3-208ENST00000564247 CPA4Q9UI42 421 aa19.79■□□□□ 0.76
CMTM3-208ENST00000564247 BRPF3Q9ULD4 1205 aa19.79■□□□□ 0.76
CMTM3-208ENST00000564247 TPCN1Q9ULQ1 816 aa19.79■□□□□ 0.76
CMTM3-208ENST00000564247 ZBTB43O43298 467 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 CALM1P0DP23 149 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 CALM2P0DP24 149 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 CALM3P0DP25 149 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 CYP2C8P10632 490 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 EEF2P13639 858 aaKnown RBP19.78■□□□□ 0.76
CMTM3-208ENST00000564247 PDIA3P30101 505 aaKnown RBP19.78■□□□□ 0.76
CMTM3-208ENST00000564247 GUCY1A2P33402 732 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 NOVP48745 357 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 HMGCS2P54868 508 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 BACE1P56817 501 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 KIF22Q14807 665 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 MKL1Q969V6 931 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 TMX3Q96JJ7 454 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 SH2D4AQ9H788 454 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 SENP2Q9HC62 589 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 PTPN22Q9Y2R2 807 aa19.78■□□□□ 0.76
CMTM3-208ENST00000564247 ZSWIM8A7E2V4 1837 aa19.77■□□□□ 0.76
CMTM3-208ENST00000564247 GOLGA8BA8MQT2 603 aa19.77■□□□□ 0.76
CMTM3-208ENST00000564247 TREML2Q5T2D2 321 aa19.77■□□□□ 0.76
CMTM3-208ENST00000564247 APOA5Q6Q788 366 aa19.77■□□□□ 0.76
CMTM3-208ENST00000564247 ZNF654Q8IZM8 581 aa19.77■□□□□ 0.76
CMTM3-208ENST00000564247 PNMA1Q8ND90 353 aa19.77■□□□□ 0.76
CMTM3-208ENST00000564247 NUP133Q8WUM0 1156 aa19.77■□□□□ 0.76
CMTM3-208ENST00000564247 C19orf81C9J6K1 198 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 USP17L10C9JJH3 530 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 DHX16O60231 1041 aaKnown RBP19.76■□□□□ 0.75
CMTM3-208ENST00000564247 DDAH1O94760 285 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 GNRH1P01148 92 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 HSP90AA1P07900 732 aaKnown RBP19.76■□□□□ 0.75
CMTM3-208ENST00000564247 BCRP11274 1271 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 RCAN1P53805 252 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 STK3Q13188 491 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 PABPC4Q13310 644 aaKnown RBP eCLIP19.76■□□□□ 0.75
CMTM3-208ENST00000564247 MTMR2Q13614 643 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 PPP2R5BQ15173 497 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 ME3Q16798 604 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 PNMA3Q9UL41 463 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 SYNPO2Q9UMS6 1093 aa19.76■□□□□ 0.75
CMTM3-208ENST00000564247 GREB1LQ9C091 1923 aaPredicted RBP19.76■□□□□ 0.75
CMTM3-208ENST00000564247 CCDC196A0A1B0GTZ2 297 aa19.75■□□□□ 0.75
CMTM3-208ENST00000564247 PFKFB2O60825 505 aa19.75■□□□□ 0.75
CMTM3-208ENST00000564247 METAP2P50579 478 aaKnown RBP eCLIP19.75■□□□□ 0.75
CMTM3-208ENST00000564247 CLEC10AQ8IUN9 316 aa19.75■□□□□ 0.75
CMTM3-208ENST00000564247 MGAMO43451 1857 aa19.75■□□□□ 0.75
CMTM3-208ENST00000564247 MYH4Q9Y623 1939 aa19.74■□□□□ 0.75
CMTM3-208ENST00000564247 GOLGA8AA7E2F4 631 aa19.74■□□□□ 0.75
CMTM3-208ENST00000564247 CCT2P78371 535 aaKnown RBP19.74■□□□□ 0.75
CMTM3-208ENST00000564247 CPLX2Q6PUV4 134 aaKnown RBP19.74■□□□□ 0.75
CMTM3-208ENST00000564247 MICU3Q86XE3 530 aa19.74■□□□□ 0.75
CMTM3-208ENST00000564247 SIAH1Q8IUQ4 282 aa19.74■□□□□ 0.75
CMTM3-208ENST00000564247 LRRC47Q8N1G4 583 aaKnown RBP19.74■□□□□ 0.75
CMTM3-208ENST00000564247 CTCFLQ8NI51 663 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-208ENST00000564247 SMCR8Q8TEV9 937 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-208ENST00000564247 MAP3K14Q99558 947 aa19.74■□□□□ 0.75
CMTM3-208ENST00000564247 ARHGAP39Q9C0H5 1083 aa19.74■□□□□ 0.75
CMTM3-208ENST00000564247 TMOD4Q9NZQ9 345 aa19.74■□□□□ 0.75
CMTM3-208ENST00000564247 TMX2Q9Y320 296 aa19.74■□□□□ 0.75
CMTM3-208ENST00000564247 RAD21O60216 631 aa19.73■□□□□ 0.75
CMTM3-208ENST00000564247 KIF5BP33176 963 aa19.73■□□□□ 0.75
CMTM3-208ENST00000564247 RGS19P49795 217 aa19.73■□□□□ 0.75
CMTM3-208ENST00000564247 TROAPQ12815 778 aa19.73■□□□□ 0.75
CMTM3-208ENST00000564247 NECAB1Q8N987 351 aa19.73■□□□□ 0.75
CMTM3-208ENST00000564247 FANCBQ8NB91 859 aa19.73■□□□□ 0.75
CMTM3-208ENST00000564247 IPO9Q96P70 1041 aaKnown RBP19.73■□□□□ 0.75
CMTM3-208ENST00000564247 FEZ1Q99689 392 aa19.73■□□□□ 0.75
CMTM3-208ENST00000564247 GOPCQ9HD26 462 aa19.73■□□□□ 0.75
CMTM3-208ENST00000564247 RBM28Q9NW13 759 aaKnown RBP19.73■□□□□ 0.75
CMTM3-208ENST00000564247 MTMR7Q9Y216 660 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms