RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 FAM98CQ17RN3 349 aaKnown RBP14.03□□□□□ -0.16
COMMD4-209ENST00000564068 SLC9C1Q4G0N8 1177 aa14.03□□□□□ -0.16
COMMD4-209ENST00000564068 IFNL3Q8IZI9 196 aa14.03□□□□□ -0.16
COMMD4-209ENST00000564068 UIMC1Q96RL1 719 aa14.03□□□□□ -0.16
COMMD4-209ENST00000564068 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
COMMD4-209ENST00000564068 CCDC6Q16204 474 aa14.02□□□□□ -0.16
COMMD4-209ENST00000564068 FBF1Q8TES7 1133 aa14.02□□□□□ -0.16
COMMD4-209ENST00000564068 TCP1P17987 556 aaKnown RBP14.02□□□□□ -0.16
COMMD4-209ENST00000564068 TXKP42681 527 aa14.02□□□□□ -0.16
COMMD4-209ENST00000564068 SV2BQ7L1I2 683 aa14.02□□□□□ -0.16
COMMD4-209ENST00000564068 MRPL44Q9H9J2 332 aaKnown RBP14.02□□□□□ -0.16
COMMD4-209ENST00000564068 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.17
COMMD4-209ENST00000564068 A0A1W2PRG0 241 aa14.02□□□□□ -0.17
COMMD4-209ENST00000564068 PARP1P09874 1014 aaKnown RBP14.02□□□□□ -0.17
COMMD4-209ENST00000564068 IL2RBP14784 551 aa14.02□□□□□ -0.17
COMMD4-209ENST00000564068 MICAL1Q8TDZ2 1067 aa14.02□□□□□ -0.17
COMMD4-209ENST00000564068 TBC1D31Q96DN5 1066 aa14.02□□□□□ -0.17
COMMD4-209ENST00000564068 POLD4Q9HCU8 107 aa14.02□□□□□ -0.17
COMMD4-209ENST00000564068 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.02□□□□□ -0.17
COMMD4-209ENST00000564068 RPN1P04843 607 aaKnown RBP14.01□□□□□ -0.17
COMMD4-209ENST00000564068 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 GNAQP50148 359 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 RESP18Q5W5W9 173 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 ENGASEQ8NFI3 743 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 CEP152O94986 1710 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 TNNI2P48788 182 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 KRT31Q15323 416 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 LMBR1Q8WVP7 490 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 EPB41L5Q9HCM4 733 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 RBM28Q9NW13 759 aaKnown RBP14.01□□□□□ -0.17
COMMD4-209ENST00000564068 RPS6KA1Q15418 735 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 DAAM2Q86T65 1068 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 ZSCAN29Q8IWY8 852 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-209ENST00000564068 CACNA2D3Q8IZS8 1091 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 CCDC26Q8TAB7 109 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 TUBGCP2Q9BSJ2 902 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 CTDP1Q9Y5B0 961 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-209ENST00000564068 CLTAP09496 248 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 PEX19P40855 299 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 DCAF17Q5H9S7 520 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-209ENST00000564068 CCDC84Q86UT8 332 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-209ENST00000564068 TEX13AQ9BXU3 409 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-209ENST00000564068 TBC1D7Q9P0N9 293 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 ANKIB1Q9P2G1 1089 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 RIPOR2Q9Y4F9 1068 aa14.01□□□□□ -0.17
COMMD4-209ENST00000564068 ST3GAL1Q11201 340 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 NNTQ13423 1086 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 TSGA10IPQ3SY00 556 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 SDR42E1Q8WUS8 393 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 ADGRB3O60242 1522 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 SALL3Q9BXA9 1300 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 KCNK3O14649 394 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 GTPBP6O43824 516 aaPredicted RBP14□□□□□ -0.17
COMMD4-209ENST00000564068 EHHADHQ08426 723 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 KLHL30Q0D2K2 578 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 CNNM4Q6P4Q7 775 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 ARHGEF25Q86VW2 580 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 METTL16Q86W50 562 aaKnown RBP14□□□□□ -0.17
COMMD4-209ENST00000564068 ZNF446Q9NWS9 450 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 ZSWIM5Q9P217 1185 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 LAMC1P11047 1609 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 TNKSO95271 1327 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 KCNJ6P48051 423 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 RASSF7Q02833 373 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 CCDC152Q4G0S7 254 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 KRT12Q99456 494 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 FUT8Q9BYC5 575 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 C6orf50Q9HD87 102 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 ODF2LQ9ULJ1 636 aa14□□□□□ -0.17
COMMD4-209ENST00000564068 MMP1P03956 469 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 FAM47AQ5JRC9 791 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 RBM43Q6ZSC3 357 aaKnown RBP13.99□□□□□ -0.17
COMMD4-209ENST00000564068 REXO1L1PQ8IX06 675 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 SPATA5Q8NB90 893 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 UHMK1Q8TAS1 419 aaKnown RBP13.99□□□□□ -0.17
COMMD4-209ENST00000564068 VEZTQ9HBM0 779 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 LRWD1Q9UFC0 647 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 RASAL2Q9UJF2 1139 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 CCNT1O60563 726 aaKnown RBP13.99□□□□□ -0.17
COMMD4-209ENST00000564068 GRIPAP1Q4V328 841 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 NELFCDQ8IXH7 590 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 ALDH8A1Q9H2A2 487 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-209ENST00000564068 FOXP1Q9H334 677 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-209ENST00000564068 HEXIM1O94992 359 aaKnown RBP13.99□□□□□ -0.17
COMMD4-209ENST00000564068 CTDNEP1O95476 244 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 FMR1Q06787 632 aaKnown RBP eCLIP13.99□□□□□ -0.17
COMMD4-209ENST00000564068 RPAINQ86UA6 219 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 PAGE5Q96GU1 130 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 ARHGEF40Q8TER5 1519 aa13.99□□□□□ -0.17
COMMD4-209ENST00000564068 PPRC1Q5VV67 1664 aaKnown RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 A0A0G2JLW4 131 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 PTPREP23469 700 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 GCKP35557 465 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 LACTBP83111 547 aaPredicted RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 PUM3Q15397 648 aaKnown RBP13.98□□□□□ -0.17
COMMD4-209ENST00000564068 MUM1L1Q5H9M0 696 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 TC2NQ8N9U0 490 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 FAM184BQ9ULE4 1060 aa13.98□□□□□ -0.17
COMMD4-209ENST00000564068 PHKA1P46020 1223 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms