RNA–Protein interactions for RNA: ENST00000563875.1

SNUPN-203, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-203ENST00000563875 MB21D1Q8N884 522 aa13.4□□□□□ -0.26
SNUPN-203ENST00000563875 NUP88Q99567 741 aaPredicted RBP13.4□□□□□ -0.26
SNUPN-203ENST00000563875 SPATC1LQ9H0A9 340 aa13.4□□□□□ -0.26
SNUPN-203ENST00000563875 IL17RBQ9NRM6 502 aa13.4□□□□□ -0.26
SNUPN-203ENST00000563875 PDE4DIPQ5VU43 2346 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 NMT2O60551 498 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 CCL5P13501 91 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 HAND2P61296 217 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 GMCL1P1Q8NEA9 526 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 REPS2Q8NFH8 660 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 NKX2-3Q8TAU0 364 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 STAG1Q8WVM7 1258 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 TRIB2Q92519 343 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 SHISA4Q96DD7 197 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 NUDT12Q9BQG2 462 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 DSCC1Q9BVC3 393 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 MOV10L1Q9BXT6 1211 aaKnown RBP13.39□□□□□ -0.27
SNUPN-203ENST00000563875 PPP1R9AQ9ULJ8 1098 aa13.39□□□□□ -0.27
SNUPN-203ENST00000563875 TSPY2A6NKD2 308 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 RAD21O60216 631 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 HMGCRP04035 888 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 XRCC5P13010 732 aaKnown RBP13.38□□□□□ -0.27
SNUPN-203ENST00000563875 CHMLP26374 656 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 UBXN2AP68543 259 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 GRB14Q14449 540 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 TMEM132BQ14DG7 1078 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
SNUPN-203ENST00000563875 SHCBP1Q8NEM2 672 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 UNC93B1Q9H1C4 597 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 BIN2Q9UBW5 565 aaPredicted RBP13.38□□□□□ -0.27
SNUPN-203ENST00000563875 ZNFX1Q9P2E3 1918 aaKnown RBP13.38□□□□□ -0.27
SNUPN-203ENST00000563875 NEDD4P46934 1319 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 RAD50Q92878 1312 aa13.38□□□□□ -0.27
SNUPN-203ENST00000563875 VWA5AO00534 786 aa13.37□□□□□ -0.27
SNUPN-203ENST00000563875 RANBP6O60518 1105 aaKnown RBP13.37□□□□□ -0.27
SNUPN-203ENST00000563875 PCP11498 1178 aaKnown RBP13.37□□□□□ -0.27
SNUPN-203ENST00000563875 CYP2B6P20813 491 aa13.37□□□□□ -0.27
SNUPN-203ENST00000563875 PTPREP23469 700 aa13.37□□□□□ -0.27
SNUPN-203ENST00000563875 TRIM32Q13049 653 aa13.37□□□□□ -0.27
SNUPN-203ENST00000563875 AKNAD1Q5T1N1 836 aa13.37□□□□□ -0.27
SNUPN-203ENST00000563875 SKAP1Q86WV1 359 aa13.37□□□□□ -0.27
SNUPN-203ENST00000563875 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
SNUPN-203ENST00000563875 APBA2Q99767 749 aa13.37□□□□□ -0.27
SNUPN-203ENST00000563875 SLF1Q9BQI6 1058 aa13.37□□□□□ -0.27
SNUPN-203ENST00000563875 RNF208Q9H0X6 261 aa13.37□□□□□ -0.27
SNUPN-203ENST00000563875 PAK6Q9NQU5 681 aaPredicted RBP13.37□□□□□ -0.27
SNUPN-203ENST00000563875 ZNF214Q9UL59 606 aaPredicted RBP13.37□□□□□ -0.27
SNUPN-203ENST00000563875 FRMPD3Q5JV73 1810 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 SLC15A5A6NIM6 579 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 GJB1P08034 283 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 HOXC6P09630 235 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 ERCC3P19447 782 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 RGS2P41220 211 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 GJA8P48165 433 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 MAP2K5Q13163 448 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 CCL14Q16627 93 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 PPP4R3BQ5MIZ7 849 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 MAP3K21Q5TCX8 1036 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 WDR78Q5VTH9 848 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
SNUPN-203ENST00000563875 RASGRP2Q7LDG7 609 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 GMCL1Q96IK5 515 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 TCP11L1Q9NUJ3 509 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 STX8Q9UNK0 236 aa13.36□□□□□ -0.27
SNUPN-203ENST00000563875 ZNF213O14771 459 aa13.35□□□□□ -0.27
SNUPN-203ENST00000563875 IGHA2P01877 340 aa13.35□□□□□ -0.27
SNUPN-203ENST00000563875 PLS1Q14651 629 aa13.35□□□□□ -0.27
SNUPN-203ENST00000563875 RRP12Q5JTH9 1297 aaKnown RBP13.35□□□□□ -0.27
SNUPN-203ENST00000563875 RCSD1Q6JBY9 416 aa13.35□□□□□ -0.27
SNUPN-203ENST00000563875 MFSD6Q6ZSS7 791 aa13.35□□□□□ -0.27
SNUPN-203ENST00000563875 RIOX2Q8IUF8 465 aa13.35□□□□□ -0.27
SNUPN-203ENST00000563875 TRMT44Q8IYL2 757 aaKnown RBP13.35□□□□□ -0.27
SNUPN-203ENST00000563875 PRPF38AQ8NAV1 312 aaKnown RBP13.35□□□□□ -0.27
SNUPN-203ENST00000563875 MROH8Q9H579 483 aa13.35□□□□□ -0.27
SNUPN-203ENST00000563875 CWC22Q9HCG8 908 aaKnown RBP13.35□□□□□ -0.27
SNUPN-203ENST00000563875 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
SNUPN-203ENST00000563875 FLRT1Q9NZU1 646 aa13.35□□□□□ -0.27
SNUPN-203ENST00000563875 IVNS1ABPQ9Y6Y0 642 aa13.35□□□□□ -0.27
SNUPN-203ENST00000563875 SGSM2O43147 1006 aa13.34□□□□□ -0.27
SNUPN-203ENST00000563875 STRNO43815 780 aa13.34□□□□□ -0.27
SNUPN-203ENST00000563875 BMP3P12645 472 aa13.34□□□□□ -0.27
SNUPN-203ENST00000563875 ZKSCAN1P17029 563 aaPredicted RBP13.34□□□□□ -0.27
SNUPN-203ENST00000563875 ADORA2AP29274 412 aa13.34□□□□□ -0.27
SNUPN-203ENST00000563875 UBE2Q1Q7Z7E8 422 aa13.34□□□□□ -0.27
SNUPN-203ENST00000563875 ABRAQ8N0Z2 381 aa13.34□□□□□ -0.27
SNUPN-203ENST00000563875 NPLOC4Q8TAT6 608 aa13.34□□□□□ -0.27
SNUPN-203ENST00000563875 U2AF1L4Q8WU68 220 aaKnown RBP13.34□□□□□ -0.27
SNUPN-203ENST00000563875 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.34□□□□□ -0.27
SNUPN-203ENST00000563875 RNF41Q9H4P4 317 aaPredicted RBP13.34□□□□□ -0.27
SNUPN-203ENST00000563875 SLC38A10Q9HBR0 1119 aa13.34□□□□□ -0.27
SNUPN-203ENST00000563875 FEM1BQ9UK73 627 aa13.34□□□□□ -0.27
SNUPN-203ENST00000563875 ATP2A1O14983 1001 aa13.33□□□□□ -0.28
SNUPN-203ENST00000563875 SLC25A27O95847 323 aa13.33□□□□□ -0.28
SNUPN-203ENST00000563875 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
SNUPN-203ENST00000563875 MCCP23508 829 aa13.33□□□□□ -0.28
SNUPN-203ENST00000563875 STAT3P40763 770 aa13.33□□□□□ -0.28
SNUPN-203ENST00000563875 PTH1RQ03431 593 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms