RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 PDE1AP54750 535 aa21.07■□□□□ 0.96
NME3-205ENST00000563854 B4GALNT3Q6L9W6 998 aa21.07■□□□□ 0.96
NME3-205ENST00000563854 SHCBP1Q8NEM2 672 aa21.07■□□□□ 0.96
NME3-205ENST00000563854 CLIP2Q9UDT6 1046 aa21.07■□□□□ 0.96
NME3-205ENST00000563854 SLC3A2P08195 630 aaKnown RBP21.06■□□□□ 0.96
NME3-205ENST00000563854 PPARAQ07869 468 aa21.06■□□□□ 0.96
NME3-205ENST00000563854 TMEM132BQ14DG7 1078 aa21.06■□□□□ 0.96
NME3-205ENST00000563854 EVI5LQ96CN4 794 aa21.06■□□□□ 0.96
NME3-205ENST00000563854 NBPF3Q9H094 633 aa21.06■□□□□ 0.96
NME3-205ENST00000563854 MROH8Q9H579 483 aa21.06■□□□□ 0.96
NME3-205ENST00000563854 C11orf49Q9H6J7 331 aa21.06■□□□□ 0.96
NME3-205ENST00000563854 NYAP2Q9P242 653 aa21.06■□□□□ 0.96
NME3-205ENST00000563854 OGDHLQ9ULD0 1010 aa21.06■□□□□ 0.96
NME3-205ENST00000563854 HOXC6P09630 235 aa21.05■□□□□ 0.96
NME3-205ENST00000563854 TSPY3P0CV98 308 aa21.05■□□□□ 0.96
NME3-205ENST00000563854 TSPY8P0CW00 308 aa21.05■□□□□ 0.96
NME3-205ENST00000563854 PDE4BQ07343 736 aa21.05■□□□□ 0.96
NME3-205ENST00000563854 LRRC47Q8N1G4 583 aaKnown RBP21.05■□□□□ 0.96
NME3-205ENST00000563854 EXOC6Q8TAG9 804 aa21.05■□□□□ 0.96
NME3-205ENST00000563854 CEP95Q96GE4 821 aa21.05■□□□□ 0.96
NME3-205ENST00000563854 RWDD1Q9H446 243 aaPredicted RBP21.05■□□□□ 0.96
NME3-205ENST00000563854 STAP2Q9UGK3 403 aa21.05■□□□□ 0.96
NME3-205ENST00000563854 PPP1R9AQ9ULJ8 1098 aa21.05■□□□□ 0.96
NME3-205ENST00000563854 ISY1Q9ULR0 285 aaKnown RBP21.05■□□□□ 0.96
NME3-205ENST00000563854 COL11A1P12107 1806 aaPredicted RBP21.05■□□□□ 0.96
NME3-205ENST00000563854 ZNF236Q9UL36 1845 aa21.05■□□□□ 0.96
NME3-205ENST00000563854 TRIM6-TRIM34B2RNG4 842 aa21.04■□□□□ 0.96
NME3-205ENST00000563854 F5H6K3 240 aa21.04■□□□□ 0.96
NME3-205ENST00000563854 STRNO43815 780 aa21.04■□□□□ 0.96
NME3-205ENST00000563854 NDUFB10O96000 172 aa21.04■□□□□ 0.96
NME3-205ENST00000563854 KLRC3Q07444 240 aa21.04■□□□□ 0.96
NME3-205ENST00000563854 FAM47AQ5JRC9 791 aa21.04■□□□□ 0.96
NME3-205ENST00000563854 C7orf61Q8IZ16 206 aa21.04■□□□□ 0.96
NME3-205ENST00000563854 IGKV6D-41A0A0C4DH26 115 aa21.03■□□□□ 0.96
NME3-205ENST00000563854 VWA5AO00534 786 aa21.03■□□□□ 0.96
NME3-205ENST00000563854 COBLO75128 1261 aa21.03■□□□□ 0.96
NME3-205ENST00000563854 SLC4A3P48751 1232 aa21.03■□□□□ 0.96
NME3-205ENST00000563854 MNX1P50219 401 aaPredicted RBP21.03■□□□□ 0.96
NME3-205ENST00000563854 SLF1Q9BQI6 1058 aa21.03■□□□□ 0.96
NME3-205ENST00000563854 SLC5A4Q9NY91 659 aa21.03■□□□□ 0.96
NME3-205ENST00000563854 MYH4Q9Y623 1939 aa21.03■□□□□ 0.96
NME3-205ENST00000563854 CEP290O15078 2479 aa21.03■□□□□ 0.96
NME3-205ENST00000563854 ALPK3Q96L96 1907 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 SLC25A27O95847 323 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 FCER1AP12319 257 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 TFAP4Q01664 338 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 CTDSPL2Q05D32 466 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 AAMPQ13685 434 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 VPS53Q5VIR6 699 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 LHX8Q68G74 356 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 RILPL2Q969X0 211 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 CHMP4CQ96CF2 233 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 MMP19Q99542 508 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 MTMR4Q9NYA4 1195 aa21.02■□□□□ 0.96
NME3-205ENST00000563854 CTDP1Q9Y5B0 961 aaPredicted RBP21.02■□□□□ 0.96
NME3-205ENST00000563854 FRMPD3Q5JV73 1810 aa21.01■□□□□ 0.95
NME3-205ENST00000563854 FOXP2O15409 715 aa21.01■□□□□ 0.95
NME3-205ENST00000563854 TTLL1O95922 423 aa21.01■□□□□ 0.95
NME3-205ENST00000563854 STAT3P40763 770 aa21.01■□□□□ 0.95
NME3-205ENST00000563854 TRPV1Q8NER1 839 aa21.01■□□□□ 0.95
NME3-205ENST00000563854 FAM227BQ96M60 508 aa21.01■□□□□ 0.95
NME3-205ENST00000563854 DDX20Q9UHI6 824 aaKnown RBP21.01■□□□□ 0.95
NME3-205ENST00000563854 ADAMTS5Q9UNA0 930 aa21.01■□□□□ 0.95
NME3-205ENST00000563854 A0A0D9SFI3 127 aa21■□□□□ 0.95
NME3-205ENST00000563854 IGHDP01880 384 aa21■□□□□ 0.95
NME3-205ENST00000563854 OLFML2BQ68BL8 750 aa21■□□□□ 0.95
NME3-205ENST00000563854 RIOX2Q8IUF8 465 aa21■□□□□ 0.95
NME3-205ENST00000563854 ABRAQ8N0Z2 381 aa21■□□□□ 0.95
NME3-205ENST00000563854 NEDD1Q8NHV4 660 aa21■□□□□ 0.95
NME3-205ENST00000563854 KIFC2Q96AC6 838 aa21■□□□□ 0.95
NME3-205ENST00000563854 HELLSQ9NRZ9 838 aa21■□□□□ 0.95
NME3-205ENST00000563854 RBM27Q9P2N5 1060 aaKnown RBP21■□□□□ 0.95
NME3-205ENST00000563854 ZNF214Q9UL59 606 aaPredicted RBP21■□□□□ 0.95
NME3-205ENST00000563854 ZMYND8Q9ULU4 1186 aaPredicted RBP21■□□□□ 0.95
NME3-205ENST00000563854 PFASO15067 1338 aa21■□□□□ 0.95
NME3-205ENST00000563854 PLIN4Q96Q06 1357 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 TSPY2A6NKD2 308 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 PGK2P07205 417 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 CYBAP13498 195 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 KCTD2Q14681 263 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 ANO1Q5XXA6 986 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 SNRNP48Q6IEG0 339 aaKnown RBP20.99■□□□□ 0.95
NME3-205ENST00000563854 SMC5Q8IY18 1101 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 CPXCR1Q8N123 301 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 REPS2Q8NFH8 660 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 INCENPQ9NQS7 918 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 TOMM22Q9NS69 142 aa20.99■□□□□ 0.95
NME3-205ENST00000563854 MSCO60682 206 aa20.98■□□□□ 0.95
NME3-205ENST00000563854 MYCNP04198 464 aaPredicted RBP20.98■□□□□ 0.95
NME3-205ENST00000563854 NMIQ13287 307 aaPredicted RBP20.98■□□□□ 0.95
NME3-205ENST00000563854 PRAMEF19Q5SWL8 479 aa20.98■□□□□ 0.95
NME3-205ENST00000563854 SLFN13Q68D06 897 aa20.98■□□□□ 0.95
NME3-205ENST00000563854 CHD1LQ86WJ1 897 aa20.98■□□□□ 0.95
NME3-205ENST00000563854 PRPF38AQ8NAV1 312 aaKnown RBP20.98■□□□□ 0.95
NME3-205ENST00000563854 MAML3Q96JK9 1138 aa20.98■□□□□ 0.95
NME3-205ENST00000563854 TEX13BQ9BXU2 312 aa20.98■□□□□ 0.95
NME3-205ENST00000563854 STX8Q9UNK0 236 aa20.98■□□□□ 0.95
NME3-205ENST00000563854 RANBP6O60518 1105 aaKnown RBP20.97■□□□□ 0.95
NME3-205ENST00000563854 ZBED4O75132 1171 aa20.97■□□□□ 0.95
NME3-205ENST00000563854 SYN1P17600 705 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms