RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 PLEKHH3Q7Z736 793 aa33.51■■■□□ 2.95
NME3-203ENST00000563367 NKX2-3Q8TAU0 364 aa33.51■■■□□ 2.95
NME3-203ENST00000563367 TOMM22Q9NS69 142 aa33.51■■■□□ 2.95
NME3-203ENST00000563367 BIN2Q9UBW5 565 aaPredicted RBP33.51■■■□□ 2.95
NME3-203ENST00000563367 SYNPO2Q9UMS6 1093 aa33.51■■■□□ 2.95
NME3-203ENST00000563367 ADAMTS5Q9UNA0 930 aa33.51■■■□□ 2.95
NME3-203ENST00000563367 MLLT1Q03111 559 aaPredicted RBP33.5■■■□□ 2.95
NME3-203ENST00000563367 AKNAD1Q5T1N1 836 aa33.5■■■□□ 2.95
NME3-203ENST00000563367 MB21D1Q8N884 522 aa33.49■■■□□ 2.95
NME3-203ENST00000563367 GMCL1P1Q8NEA9 526 aa33.49■■■□□ 2.95
NME3-203ENST00000563367 STAG1Q8WVM7 1258 aa33.49■■■□□ 2.95
NME3-203ENST00000563367 NUDT12Q9BQG2 462 aa33.49■■■□□ 2.95
NME3-203ENST00000563367 TMEM106CQ9BVX2 250 aa33.49■■■□□ 2.95
NME3-203ENST00000563367 MOV10L1Q9BXT6 1211 aaKnown RBP33.49■■■□□ 2.95
NME3-203ENST00000563367 ZNF213O14771 459 aa33.48■■■□□ 2.95
NME3-203ENST00000563367 TNRC18O15417 2968 aaPredicted RBP33.48■■■□□ 2.95
NME3-203ENST00000563367 CYP2B6P20813 491 aa33.48■■■□□ 2.95
NME3-203ENST00000563367 MORN1Q5T089 497 aa33.48■■■□□ 2.95
NME3-203ENST00000563367 MFSD6Q6ZSS7 791 aa33.48■■■□□ 2.95
NME3-203ENST00000563367 USP6NLQ92738 828 aa33.48■■■□□ 2.95
NME3-203ENST00000563367 SPATC1LQ9H0A9 340 aa33.48■■■□□ 2.95
NME3-203ENST00000563367 PPP1R9AQ9ULJ8 1098 aa33.48■■■□□ 2.95
NME3-203ENST00000563367 ZNFX1Q9P2E3 1918 aaKnown RBP33.47■■■□□ 2.95
NME3-203ENST00000563367 INHAP05111 366 aa33.47■■■□□ 2.95
NME3-203ENST00000563367 EN2P19622 333 aaPredicted RBP33.47■■■□□ 2.95
NME3-203ENST00000563367 WDR78Q5VTH9 848 aa33.47■■■□□ 2.95
NME3-203ENST00000563367 SLFN13Q68D06 897 aa33.47■■■□□ 2.95
NME3-203ENST00000563367 SOCS4Q8WXH5 440 aa33.47■■■□□ 2.95
NME3-203ENST00000563367 STX8Q9UNK0 236 aa33.47■■■□□ 2.95
NME3-203ENST00000563367 RAD50Q92878 1312 aa33.47■■■□□ 2.95
NME3-203ENST00000563367 NOVP48745 357 aa33.46■■■□□ 2.95
NME3-203ENST00000563367 UBXN2AP68543 259 aa33.46■■■□□ 2.95
NME3-203ENST00000563367 TMEM132BQ14DG7 1078 aa33.46■■■□□ 2.95
NME3-203ENST00000563367 CWC22Q9HCG8 908 aaKnown RBP33.46■■■□□ 2.95
NME3-203ENST00000563367 PCP11498 1178 aaKnown RBP33.45■■■□□ 2.95
NME3-203ENST00000563367 CCL5P13501 91 aa33.45■■■□□ 2.95
NME3-203ENST00000563367 PLS1Q14651 629 aa33.45■■■□□ 2.95
NME3-203ENST00000563367 RUFY2Q8WXA3 655 aa33.45■■■□□ 2.95
NME3-203ENST00000563367 SLF1Q9BQI6 1058 aa33.45■■■□□ 2.95
NME3-203ENST00000563367 NEDD4P46934 1319 aa33.45■■■□□ 2.95
NME3-203ENST00000563367 VWA5AO00534 786 aa33.44■■■□□ 2.94
NME3-203ENST00000563367 PTPREP23469 700 aa33.44■■■□□ 2.94
NME3-203ENST00000563367 PPP4R3BQ5MIZ7 849 aa33.44■■■□□ 2.94
NME3-203ENST00000563367 CCDC136Q96JN2 1154 aa33.44■■■□□ 2.94
NME3-203ENST00000563367 ERCC3P19447 782 aa33.43■■■□□ 2.94
NME3-203ENST00000563367 REPS2Q8NFH8 660 aa33.43■■■□□ 2.94
NME3-203ENST00000563367 TRIB2Q92519 343 aa33.43■■■□□ 2.94
NME3-203ENST00000563367 CHMP4CQ96CF2 233 aa33.43■■■□□ 2.94
NME3-203ENST00000563367 UNC93B1Q9H1C4 597 aa33.43■■■□□ 2.94
NME3-203ENST00000563367 RNF41Q9H4P4 317 aaPredicted RBP33.43■■■□□ 2.94
NME3-203ENST00000563367 TCP11L1Q9NUJ3 509 aa33.43■■■□□ 2.94
NME3-203ENST00000563367 CTNNA3Q9UI47 895 aa33.43■■■□□ 2.94
NME3-203ENST00000563367 XRCC5P13010 732 aaKnown RBP33.42■■■□□ 2.94
NME3-203ENST00000563367 PTH1RQ03431 593 aa33.42■■■□□ 2.94
NME3-203ENST00000563367 TRIM32Q13049 653 aa33.42■■■□□ 2.94
NME3-203ENST00000563367 SHCBP1Q8NEM2 672 aa33.42■■■□□ 2.94
NME3-203ENST00000563367 SLC15A5A6NIM6 579 aa33.41■■■□□ 2.94
NME3-203ENST00000563367 SGSM2O43147 1006 aa33.41■■■□□ 2.94
NME3-203ENST00000563367 BMP3P12645 472 aa33.41■■■□□ 2.94
NME3-203ENST00000563367 RGS2P41220 211 aa33.41■■■□□ 2.94
NME3-203ENST00000563367 MAP2K5Q13163 448 aa33.41■■■□□ 2.94
NME3-203ENST00000563367 IMMTQ16891 758 aaKnown RBP33.41■■■□□ 2.94
NME3-203ENST00000563367 PRPF38AQ8NAV1 312 aaKnown RBP33.41■■■□□ 2.94
NME3-203ENST00000563367 RNF208Q9H0X6 261 aa33.41■■■□□ 2.94
NME3-203ENST00000563367 ZNF236Q9UL36 1845 aa33.4■■■□□ 2.94
NME3-203ENST00000563367 HMGCRP04035 888 aa33.4■■■□□ 2.94
NME3-203ENST00000563367 MCCP23508 829 aa33.4■■■□□ 2.94
NME3-203ENST00000563367 GRB14Q14449 540 aa33.4■■■□□ 2.94
NME3-203ENST00000563367 RASGRP2Q7LDG7 609 aa33.4■■■□□ 2.94
NME3-203ENST00000563367 GMCL1Q96IK5 515 aa33.4■■■□□ 2.94
NME3-203ENST00000563367 FEM1BQ9UK73 627 aa33.4■■■□□ 2.94
NME3-203ENST00000563367 ZNF214Q9UL59 606 aaPredicted RBP33.4■■■□□ 2.94
NME3-203ENST00000563367 IVNS1ABPQ9Y6Y0 642 aa33.4■■■□□ 2.94
NME3-203ENST00000563367 MKI67P46013 3256 aaKnown RBP33.39■■■□□ 2.94
NME3-203ENST00000563367 NEFLP07196 543 aa33.39■■■□□ 2.94
NME3-203ENST00000563367 CCL14Q16627 93 aa33.39■■■□□ 2.94
NME3-203ENST00000563367 NCAPG2Q86XI2 1143 aa33.39■■■□□ 2.94
NME3-203ENST00000563367 KIFC2Q96AC6 838 aa33.39■■■□□ 2.94
NME3-203ENST00000563367 TMEM47Q9BQJ4 181 aa33.39■■■□□ 2.94
NME3-203ENST00000563367 RCSD1Q6JBY9 416 aa33.38■■■□□ 2.93
NME3-203ENST00000563367 ESR2Q92731 530 aa33.38■■■□□ 2.93
NME3-203ENST00000563367 APBA2Q99767 749 aa33.38■■■□□ 2.93
NME3-203ENST00000563367 MROH8Q9H579 483 aa33.38■■■□□ 2.93
NME3-203ENST00000563367 GJB1P08034 283 aa33.37■■■□□ 2.93
NME3-203ENST00000563367 STAT3P40763 770 aa33.37■■■□□ 2.93
NME3-203ENST00000563367 SLC1A4P43007 532 aa33.37■■■□□ 2.93
NME3-203ENST00000563367 RIOX2Q8IUF8 465 aa33.37■■■□□ 2.93
NME3-203ENST00000563367 MTMR7Q9Y216 660 aa33.37■■■□□ 2.93
NME3-203ENST00000563367 B4E1Z4 1266 aa33.36■■■□□ 2.93
NME3-203ENST00000563367 TMEM232C9JQI7 657 aa33.36■■■□□ 2.93
NME3-203ENST00000563367 TOP1P11387 765 aaKnown RBP33.36■■■□□ 2.93
NME3-203ENST00000563367 SHISA4Q96DD7 197 aa33.36■■■□□ 2.93
NME3-203ENST00000563367 ZKSCAN3Q9BRR0 538 aa33.36■■■□□ 2.93
NME3-203ENST00000563367 ISY1Q9ULR0 285 aaKnown RBP33.36■■■□□ 2.93
NME3-203ENST00000563367 STRNO43815 780 aa33.35■■■□□ 2.93
NME3-203ENST00000563367 KDM4AO75164 1064 aa33.35■■■□□ 2.93
NME3-203ENST00000563367 SLC25A27O95847 323 aa33.35■■■□□ 2.93
NME3-203ENST00000563367 ZKSCAN1P17029 563 aaPredicted RBP33.35■■■□□ 2.93
NME3-203ENST00000563367 ADORA2AP29274 412 aa33.35■■■□□ 2.93
NME3-203ENST00000563367 BMP2KLQ5H9B9 411 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms