RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 FEZ1Q99689 392 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 TSEN34Q9BSV6 310 aaKnown RBP9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 BRWD1Q9NSI6 2320 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 SAP30BPQ9UHR5 308 aaKnown RBP9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 NRBP1Q9UHY1 535 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 A0A1W2PRG0 241 aa9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 DCDC2CA8MYV0 355 aa9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 UBTFL1P0CB47 393 aaPredicted RBP9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 PLCG2P16885 1265 aa9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 POU3F3P20264 500 aaPredicted RBP9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 COG2Q14746 738 aa9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 KIAA1755Q5JYT7 1200 aa9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 MROH8Q9H579 483 aa9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 STARD7Q9NQZ5 370 aa9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 AKAP2Q9Y2D5 859 aa9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 SYNRGQ9UMZ2 1314 aa9.51□□□□□ -0.89
HERPUD1-206ENST00000563343 FAM86C2PA6NEL3 165 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 MOXD2PA6NHM9 499 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 BAG3O95817 575 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 AKR1A1P14550 325 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 DYNLL1P63167 89 aaKnown RBP9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 IRX5P78411 483 aaPredicted RBP9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 RAB3GAP1Q15042 981 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 AAK1Q2M2I8 961 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 ZNF792Q3KQV3 632 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 NAA16Q6N069 864 aaPredicted RBP9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 PSRC1Q6PGN9 363 aaPredicted RBP9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 FAM126BQ8IXS8 530 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 SSH1Q8WYL5 1049 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 VWCEQ96DN2 955 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 TRIM34Q9BYJ4 488 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 EHD4Q9H223 541 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 TSPYL2Q9H2G4 693 aaPredicted RBP9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 SLC28A3Q9HAS3 691 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 SLC5A4Q9NY91 659 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 HOXC10Q9NYD6 342 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 LRP2BPQ9P2M1 347 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 MSRAQ9UJ68 235 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 ZNF521Q96K83 1311 aa9.5□□□□□ -0.89
HERPUD1-206ENST00000563343 TANC1Q9C0D5 1861 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 BAZ2AQ9UIF9 1905 aaKnown RBP9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 MYADML2A6NDP7 307 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 PI4K2BG5E9Z4 385 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 HLA-DOAP06340 250 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 MYOGP15173 224 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 SHMT1P34896 483 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 KCNA10Q16322 511 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 CCDC174Q6PII3 467 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 NUP133Q8WUM0 1156 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 NEUROD6Q96NK8 337 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 NOL10Q9BSC4 688 aaKnown RBP9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 CD320Q9NPF0 282 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 IL23AQ9NPF7 189 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 DIS3Q9Y2L1 958 aaKnown RBP9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 MTCH2Q9Y6C9 303 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 ZNF318Q5VUA4 2279 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 ELP1O95163 1332 aa9.49□□□□□ -0.89
HERPUD1-206ENST00000563343 ADCY6O43306 1168 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 CD4P01730 458 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 CYP2E1P05181 493 aaPredicted RBP9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 FCER1AP12319 257 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 CST5P28325 142 aaPredicted RBP9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 MRE11P49959 708 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 RABGGTBP53611 331 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 GABPAQ06546 454 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 MTX1Q13505 466 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 TMEM132BQ14DG7 1078 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 ABCB5Q2M3G0 1257 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 CERKLQ49MI3 558 aaPredicted RBP9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 ATF7IPQ6VMQ6 1270 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 NCAPG2Q86XI2 1143 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 MIER1Q8N108 512 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 MICALL1Q8N3F8 863 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 TMEM199Q8N511 208 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 MB21D1Q8N884 522 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 ATG4CQ96DT6 458 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 CDCA7LQ96GN5 454 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 PPP1R12CQ9BZL4 782 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 SERPINB13Q9UIV8 391 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 ADAMTS5Q9UNA0 930 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 UMODL1Q5DID0 1318 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 MROH7Q68CQ1 1323 aa9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 GREB1LQ9C091 1923 aaPredicted RBP9.48□□□□□ -0.89
HERPUD1-206ENST00000563343 EPOPA6NHQ4 379 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 SMIM22K7EJ46 135 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 ARVCFO00192 962 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 RFXAPO00287 272 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 CTAGE5O15320 804 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 PGK2P07205 417 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 UQCRFS1P1P0C7P4 283 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 CYP2C18P33260 490 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 PLCD1P51178 756 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 SEPT2Q15019 361 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 PPP2R2DQ66LE6 453 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 KRT40Q6A162 431 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 MEIS3Q99687 375 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 SNRKQ9NRH2 765 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 COG5Q9UP83 839 aa9.47□□□□□ -0.89
HERPUD1-206ENST00000563343 TET1Q8NFU7 2136 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms