RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 AOC3Q16853 763 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 EPSTI1Q96J88 318 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 BPIFA3Q9BQP9 254 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 NRBP1Q9UHY1 535 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 PCDHA4Q9UN74 947 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 A0A087X0B3 334 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 PARP1P09874 1014 aaKnown RBP21.86■■□□□ 1.09
SMPD3-203ENST00000563226 PRR29P0C7W0 189 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 CALML3P27482 149 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 CACNB3P54284 484 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 GRAMD1CQ8IYS0 662 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 CNKSR1Q969H4 720 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 SERPINB13Q9UIV8 391 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 PCDHA5Q9Y5H7 936 aa21.86■■□□□ 1.09
SMPD3-203ENST00000563226 USP17L5A8MUK1 530 aa21.85■■□□□ 1.09
SMPD3-203ENST00000563226 M0R2N6 131 aa21.85■■□□□ 1.09
SMPD3-203ENST00000563226 ACTN4O43707 911 aaKnown RBP21.85■■□□□ 1.09
SMPD3-203ENST00000563226 PTGS1P23219 599 aa21.85■■□□□ 1.09
SMPD3-203ENST00000563226 SHMT1P34896 483 aa21.85■■□□□ 1.09
SMPD3-203ENST00000563226 EIF6P56537 245 aaKnown RBP21.85■■□□□ 1.09
SMPD3-203ENST00000563226 PTGDRQ13258 359 aa21.85■■□□□ 1.09
SMPD3-203ENST00000563226 STRIP1Q5VSL9 837 aa21.85■■□□□ 1.09
SMPD3-203ENST00000563226 SPZ1Q9BXG8 430 aa21.85■■□□□ 1.09
SMPD3-203ENST00000563226 BARHL2Q9NY43 387 aa21.85■■□□□ 1.09
SMPD3-203ENST00000563226 MTMR4Q9NYA4 1195 aa21.85■■□□□ 1.09
SMPD3-203ENST00000563226 IGKV6D-41A0A0C4DH26 115 aa21.84■■□□□ 1.09
SMPD3-203ENST00000563226 ATP2C1P98194 919 aaPredicted RBP21.84■■□□□ 1.09
SMPD3-203ENST00000563226 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.84■■□□□ 1.09
SMPD3-203ENST00000563226 LRRC47Q8N1G4 583 aaKnown RBP21.84■■□□□ 1.09
SMPD3-203ENST00000563226 ZDHHC15Q96MV8 337 aa21.84■■□□□ 1.09
SMPD3-203ENST00000563226 LZTS2Q9BRK4 669 aa21.84■■□□□ 1.09
SMPD3-203ENST00000563226 GREB1LQ9C091 1923 aaPredicted RBP21.84■■□□□ 1.09
SMPD3-203ENST00000563226 MCM7P33993 719 aa21.84■■□□□ 1.09
SMPD3-203ENST00000563226 NCAPHQ15003 741 aa21.84■■□□□ 1.09
SMPD3-203ENST00000563226 DRC7Q8IY82 874 aa21.84■■□□□ 1.09
SMPD3-203ENST00000563226 C17orf53Q8N3J3 647 aaPredicted RBP21.84■■□□□ 1.09
SMPD3-203ENST00000563226 GOLGA6L6A8MZA4 724 aa21.83■■□□□ 1.09
SMPD3-203ENST00000563226 BMP15O95972 392 aa21.83■■□□□ 1.09
SMPD3-203ENST00000563226 TRAPPC10P48553 1259 aa21.83■■□□□ 1.09
SMPD3-203ENST00000563226 POSTNQ15063 836 aa21.83■■□□□ 1.09
SMPD3-203ENST00000563226 HOMER1Q86YM7 354 aa21.83■■□□□ 1.09
SMPD3-203ENST00000563226 SYMPKQ92797 1274 aaKnown RBP21.83■■□□□ 1.09
SMPD3-203ENST00000563226 FERMT2Q96AC1 680 aa21.83■■□□□ 1.09
SMPD3-203ENST00000563226 PCDHA6Q9UN73 950 aa21.83■■□□□ 1.09
SMPD3-203ENST00000563226 PCDHA8Q9Y5H6 950 aa21.83■■□□□ 1.09
SMPD3-203ENST00000563226 FRMPD2Q68DX3 1309 aaPredicted RBP21.83■■□□□ 1.09
SMPD3-203ENST00000563226 VWA3AA6NCI4 1184 aa21.83■■□□□ 1.08
SMPD3-203ENST00000563226 PDHBP11177 359 aa21.83■■□□□ 1.08
SMPD3-203ENST00000563226 BMP6P22004 513 aa21.83■■□□□ 1.08
SMPD3-203ENST00000563226 KIAA2012Q0VF49 1180 aa21.83■■□□□ 1.08
SMPD3-203ENST00000563226 CCDC186Q7Z3E2 898 aa21.83■■□□□ 1.08
SMPD3-203ENST00000563226 ELOA2Q8IYF1 753 aaPredicted RBP21.83■■□□□ 1.08
SMPD3-203ENST00000563226 UBA5Q9GZZ9 404 aa21.83■■□□□ 1.08
SMPD3-203ENST00000563226 CLIP2Q9UDT6 1046 aa21.83■■□□□ 1.08
SMPD3-203ENST00000563226 CDC25BP30305 580 aa21.82■■□□□ 1.08
SMPD3-203ENST00000563226 IL17AQ16552 155 aa21.82■■□□□ 1.08
SMPD3-203ENST00000563226 VAT1LQ9HCJ6 419 aa21.82■■□□□ 1.08
SMPD3-203ENST00000563226 SWAP70Q9UH65 585 aa21.82■■□□□ 1.08
SMPD3-203ENST00000563226 MYH4Q9Y623 1939 aa21.82■■□□□ 1.08
SMPD3-203ENST00000563226 FKBP1AP62942 108 aaKnown RBP21.81■■□□□ 1.08
SMPD3-203ENST00000563226 TCP10Q12799 353 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 CCDC144BQ3MJ40 725 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 DAGLBQ8NCG7 672 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 CCDC148Q8NFR7 591 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 DHX58Q96C10 678 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 MRFAP1L1Q96HT8 127 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 DNAJC18Q9H819 358 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 PYCARDQ9ULZ3 195 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 C21orf2O43822 256 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 OFD1O75665 1012 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 RBM5P52756 815 aaKnown RBP eCLIP21.81■■□□□ 1.08
SMPD3-203ENST00000563226 PIGSQ96S52 555 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 MAN1B1Q9UKM7 699 aa21.81■■□□□ 1.08
SMPD3-203ENST00000563226 FAM196BA6NMK8 535 aa21.8■■□□□ 1.08
SMPD3-203ENST00000563226 C4orf32Q8N8J7 132 aa21.8■■□□□ 1.08
SMPD3-203ENST00000563226 FAM198AQ9UFP1 575 aa21.8■■□□□ 1.08
SMPD3-203ENST00000563226 YDJCA8MPS7 323 aa21.79■■□□□ 1.08
SMPD3-203ENST00000563226 HLA-DOAP06340 250 aa21.79■■□□□ 1.08
SMPD3-203ENST00000563226 TPM3P06753 285 aa21.79■■□□□ 1.08
SMPD3-203ENST00000563226 DEFB132Q7Z7B7 95 aa21.79■■□□□ 1.08
SMPD3-203ENST00000563226 HSD3B7Q9H2F3 369 aa21.79■■□□□ 1.08
SMPD3-203ENST00000563226 MYO3BQ8WXR4 1341 aa21.79■■□□□ 1.08
SMPD3-203ENST00000563226 CCDC194A0A1B0GVG4 234 aa21.79■■□□□ 1.08
SMPD3-203ENST00000563226 DDTLA6NHG4 134 aaPredicted RBP21.79■■□□□ 1.08
SMPD3-203ENST00000563226 NAPAP54920 295 aa21.79■■□□□ 1.08
SMPD3-203ENST00000563226 SHROOM1Q2M3G4 852 aaPredicted RBP21.79■■□□□ 1.08
SMPD3-203ENST00000563226 RRP36Q96EU6 259 aaKnown RBP21.79■■□□□ 1.08
SMPD3-203ENST00000563226 MRIQ9BWK5 157 aa21.79■■□□□ 1.08
SMPD3-203ENST00000563226 C10orf71Q711Q0 1435 aa21.79■■□□□ 1.08
SMPD3-203ENST00000563226 SARSP49591 514 aaKnown RBP21.78■■□□□ 1.08
SMPD3-203ENST00000563226 LRMPQ12912 555 aa21.78■■□□□ 1.08
SMPD3-203ENST00000563226 INF2Q27J81 1249 aa21.78■■□□□ 1.08
SMPD3-203ENST00000563226 NT5DC1Q5TFE4 455 aa21.78■■□□□ 1.08
SMPD3-203ENST00000563226 SH3BP5LQ7L8J4 393 aa21.78■■□□□ 1.08
SMPD3-203ENST00000563226 ZMYND12Q9H0C1 365 aa21.78■■□□□ 1.08
SMPD3-203ENST00000563226 HOOK1Q9UJC3 728 aaKnown RBP21.78■■□□□ 1.08
SMPD3-203ENST00000563226 MPHOSPH10O00566 681 aaKnown RBP21.78■■□□□ 1.08
SMPD3-203ENST00000563226 TTLL1O95922 423 aa21.78■■□□□ 1.08
SMPD3-203ENST00000563226 SNHG28P0DPA3 235 aa21.78■■□□□ 1.08
SMPD3-203ENST00000563226 GALNT17Q6IS24 598 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms