RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 PCDH10Q9P2E7 1040 aa18.79■□□□□ 0.6
SF3B3-203ENST00000562874 LRRC37A2A6NM11 1700 aa18.78■□□□□ 0.6
SF3B3-203ENST00000562874 EVI5O60447 810 aa18.78■□□□□ 0.6
SF3B3-203ENST00000562874 CYP2C19P33261 490 aa18.78■□□□□ 0.6
SF3B3-203ENST00000562874 TMEM132BQ14DG7 1078 aa18.78■□□□□ 0.6
SF3B3-203ENST00000562874 LRRC47Q8N1G4 583 aaKnown RBP18.78■□□□□ 0.6
SF3B3-203ENST00000562874 ANKLE1Q8NAG6 615 aa18.78■□□□□ 0.6
SF3B3-203ENST00000562874 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
SF3B3-203ENST00000562874 NAPBQ9H115 298 aa18.78■□□□□ 0.6
SF3B3-203ENST00000562874 OGDHLQ9ULD0 1010 aa18.78■□□□□ 0.6
SF3B3-203ENST00000562874 PATL2C9JE40 543 aaKnown RBP18.77■□□□□ 0.6
SF3B3-203ENST00000562874 FOXP2O15409 715 aa18.77■□□□□ 0.6
SF3B3-203ENST00000562874 PDE1AP54750 535 aa18.77■□□□□ 0.6
SF3B3-203ENST00000562874 MFSD14CQ5VZR4 134 aa18.77■□□□□ 0.6
SF3B3-203ENST00000562874 DPP9Q86TI2 863 aa18.77■□□□□ 0.6
SF3B3-203ENST00000562874 C7orf61Q8IZ16 206 aa18.77■□□□□ 0.6
SF3B3-203ENST00000562874 MB21D1Q8N884 522 aa18.77■□□□□ 0.6
SF3B3-203ENST00000562874 SHCBP1Q8NEM2 672 aa18.77■□□□□ 0.6
SF3B3-203ENST00000562874 PLIN4Q96Q06 1357 aa18.77■□□□□ 0.6
SF3B3-203ENST00000562874 PFASO15067 1338 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 NDUFB10O96000 172 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 HOXC6P09630 235 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 CNGA1P29973 690 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 PPARAQ07869 468 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 FAM47AQ5JRC9 791 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 VPS53Q5VIR6 699 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 CEP95Q96GE4 821 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 NACAP1Q9BZK3 213 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 C11orf49Q9H6J7 331 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 PPP1R9AQ9ULJ8 1098 aa18.76■□□□□ 0.59
SF3B3-203ENST00000562874 IGKV6D-41A0A0C4DH26 115 aa18.75■□□□□ 0.59
SF3B3-203ENST00000562874 COBLO75128 1261 aa18.75■□□□□ 0.59
SF3B3-203ENST00000562874 LHX8Q68G74 356 aa18.75■□□□□ 0.59
SF3B3-203ENST00000562874 ZNF444Q8N0Y2 327 aaPredicted RBP18.75■□□□□ 0.59
SF3B3-203ENST00000562874 TRPV1Q8NER1 839 aa18.75■□□□□ 0.59
SF3B3-203ENST00000562874 EXOC6Q8TAG9 804 aa18.75■□□□□ 0.59
SF3B3-203ENST00000562874 CHMP4CQ96CF2 233 aa18.75■□□□□ 0.59
SF3B3-203ENST00000562874 NBPF3Q9H094 633 aa18.75■□□□□ 0.59
SF3B3-203ENST00000562874 NYAP2Q9P242 653 aa18.75■□□□□ 0.59
SF3B3-203ENST00000562874 RBM27Q9P2N5 1060 aaKnown RBP18.75■□□□□ 0.59
SF3B3-203ENST00000562874 CLIP2Q9UDT6 1046 aa18.75■□□□□ 0.59
SF3B3-203ENST00000562874 NR2E3Q9Y5X4 410 aa18.75■□□□□ 0.59
SF3B3-203ENST00000562874 A0A0D9SFI3 127 aa18.74■□□□□ 0.59
SF3B3-203ENST00000562874 FXR1P51114 621 aaKnown RBP eCLIP18.74■□□□□ 0.59
SF3B3-203ENST00000562874 CTDSPL2Q05D32 466 aa18.74■□□□□ 0.59
SF3B3-203ENST00000562874 ANO1Q5XXA6 986 aa18.74■□□□□ 0.59
SF3B3-203ENST00000562874 EVI5LQ96CN4 794 aa18.74■□□□□ 0.59
SF3B3-203ENST00000562874 FAM227BQ96M60 508 aa18.74■□□□□ 0.59
SF3B3-203ENST00000562874 MROH8Q9H579 483 aa18.74■□□□□ 0.59
SF3B3-203ENST00000562874 STAP2Q9UGK3 403 aa18.74■□□□□ 0.59
SF3B3-203ENST00000562874 ZNF214Q9UL59 606 aaPredicted RBP18.74■□□□□ 0.59
SF3B3-203ENST00000562874 ZMYND8Q9ULU4 1186 aaPredicted RBP18.74■□□□□ 0.59
SF3B3-203ENST00000562874 F5H6K3 240 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 VWA5AO00534 786 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 TSPY3P0CV98 308 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 TSPY8P0CW00 308 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 CYBAP13498 195 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 CAPN2P17655 700 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 KLRC3Q07444 240 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 REPS2Q8NFH8 660 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 MMP19Q99542 508 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 SLF1Q9BQI6 1058 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 INCENPQ9NQS7 918 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 DDX20Q9UHI6 824 aaKnown RBP18.73■□□□□ 0.59
SF3B3-203ENST00000562874 ADAMTS5Q9UNA0 930 aa18.73■□□□□ 0.59
SF3B3-203ENST00000562874 PGK2P07205 417 aa18.72■□□□□ 0.59
SF3B3-203ENST00000562874 SYN1P17600 705 aa18.72■□□□□ 0.59
SF3B3-203ENST00000562874 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
SF3B3-203ENST00000562874 PDE4BQ07343 736 aa18.72■□□□□ 0.59
SF3B3-203ENST00000562874 RASGRP2Q7LDG7 609 aa18.72■□□□□ 0.59
SF3B3-203ENST00000562874 RIOX2Q8IUF8 465 aa18.72■□□□□ 0.59
SF3B3-203ENST00000562874 ZNF287Q9HBT7 754 aa18.72■□□□□ 0.59
SF3B3-203ENST00000562874 MTMR4Q9NYA4 1195 aa18.72■□□□□ 0.59
SF3B3-203ENST00000562874 ISY1Q9ULR0 285 aaKnown RBP18.72■□□□□ 0.59
SF3B3-203ENST00000562874 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
SF3B3-203ENST00000562874 TRIM6-TRIM34B2RNG4 842 aa18.71■□□□□ 0.59
SF3B3-203ENST00000562874 STRNO43815 780 aa18.71■□□□□ 0.59
SF3B3-203ENST00000562874 IGHDP01880 384 aa18.71■□□□□ 0.59
SF3B3-203ENST00000562874 FCER1AP12319 257 aa18.71■□□□□ 0.59
SF3B3-203ENST00000562874 TFAP4Q01664 338 aa18.71■□□□□ 0.59
SF3B3-203ENST00000562874 PRAMEF19Q5SWL8 479 aa18.71■□□□□ 0.59
SF3B3-203ENST00000562874 OLFML2BQ68BL8 750 aa18.71■□□□□ 0.59
SF3B3-203ENST00000562874 SMC5Q8IY18 1101 aa18.71■□□□□ 0.59
SF3B3-203ENST00000562874 NEDD1Q8NHV4 660 aa18.71■□□□□ 0.59
SF3B3-203ENST00000562874 MAML3Q96JK9 1138 aa18.71■□□□□ 0.59
SF3B3-203ENST00000562874 SLC25A27O95847 323 aa18.7■□□□□ 0.58
SF3B3-203ENST00000562874 TTLL1O95922 423 aa18.7■□□□□ 0.58
SF3B3-203ENST00000562874 IGHA2P01877 340 aa18.7■□□□□ 0.58
SF3B3-203ENST00000562874 SLC3A2P08195 630 aaKnown RBP18.7■□□□□ 0.58
SF3B3-203ENST00000562874 COL6A1P12109 1028 aa18.7■□□□□ 0.58
SF3B3-203ENST00000562874 STAT3P40763 770 aa18.7■□□□□ 0.58
SF3B3-203ENST00000562874 NMIQ13287 307 aaPredicted RBP18.7■□□□□ 0.58
SF3B3-203ENST00000562874 SNRNP48Q6IEG0 339 aaKnown RBP18.7■□□□□ 0.58
SF3B3-203ENST00000562874 ZNF589Q86UQ0 364 aaPredicted RBP18.7■□□□□ 0.58
SF3B3-203ENST00000562874 CPXCR1Q8N123 301 aa18.7■□□□□ 0.58
SF3B3-203ENST00000562874 RILPL2Q969X0 211 aa18.7■□□□□ 0.58
SF3B3-203ENST00000562874 KIFC2Q96AC6 838 aa18.7■□□□□ 0.58
SF3B3-203ENST00000562874 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.7■□□□□ 0.58
SF3B3-203ENST00000562874 NMT2O60551 498 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms