RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CNNM4Q6P4Q7 775 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 SLFN12Q8IYM2 578 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 LRRC47Q8N1G4 583 aaKnown RBP8.49□□□□□ -1.05
TCF4-216ENST00000562680 ACBD3Q9H3P7 528 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 SNAP23O00161 211 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 CCNT1O60563 726 aaKnown RBP8.48□□□□□ -1.05
TCF4-216ENST00000562680 PPP6R2O75170 966 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 ZBTB7AO95365 584 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 BMP3P12645 472 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 CCT6AP40227 531 aaKnown RBP8.48□□□□□ -1.05
TCF4-216ENST00000562680 MYL5Q02045 173 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 ARHGAP29Q52LW3 1261 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 RCSD1Q6JBY9 416 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 FCHSD1Q86WN1 690 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 COL23A1Q86Y22 540 aaPredicted RBP8.48□□□□□ -1.05
TCF4-216ENST00000562680 NEDD1Q8NHV4 660 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 VPS33BQ9H267 617 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 GCOM1H8Y6P7 765 aaPredicted RBP8.48□□□□□ -1.05
TCF4-216ENST00000562680 ADCY5O95622 1261 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 POLR2MP0CAP2 368 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 FDX1P10109 184 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 RPS12P25398 132 aaKnown RBP8.48□□□□□ -1.05
TCF4-216ENST00000562680 HS1BP3Q53T59 392 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 PPP1R18Q6NYC8 613 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 A0A1B0GVL5 298 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 ORC2Q13416 577 aaPredicted RBP8.48□□□□□ -1.05
TCF4-216ENST00000562680 GNPTABQ3T906 1256 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 BRDTQ58F21 947 aaPredicted RBP8.48□□□□□ -1.05
TCF4-216ENST00000562680 IQCEQ6IPM2 695 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 TBC1D10CQ8IV04 446 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 CUEDC2Q9H467 287 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 SLC5A4Q9NY91 659 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 PCDHA4Q9UN74 947 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 SLIT2O94813 1529 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 KRT13P13646 458 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 TGFB2P61812 414 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 TRIML1Q8N9V2 468 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 AK8Q96MA6 479 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 MTFR1LQ9H019 292 aa8.48□□□□□ -1.05
TCF4-216ENST00000562680 CLRN2A0PK11 232 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 LONP1P36776 959 aaKnown RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 C12orf60Q5U649 245 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 TMTC3Q6ZXV5 915 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 ZNF830Q96NB3 372 aaPredicted RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 USP28Q96RU2 1077 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 ZNF202O95125 648 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 TUBB4AP04350 444 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 OR52Z1P0C646 297 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 UBASH3AP57075 661 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 SLC39A14Q15043 492 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 CCDC174Q6PII3 467 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 CAGE1Q8TC20 777 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 SLC4A9Q96Q91 983 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 DNAJC25Q9H1X3 360 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 DISP2A7MBM2 1401 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 TMEM232C9JQI7 657 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 AOC3Q16853 763 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 ARMC9Q7Z3E5 817 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 APBB1IPQ7Z5R6 666 aaPredicted RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 GINM1Q9NU53 330 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 PCDHA1Q9Y5I3 950 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 SALL1Q9NSC2 1324 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 USO1O60763 962 aaKnown RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 MMP1P03956 469 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 IREB2P48200 963 aaKnown RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 KIF23Q02241 960 aaPredicted RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 TOB2Q14106 344 aaPredicted RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 EZH2Q15910 746 aaKnown RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 ZYXQ15942 572 aaKnown RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 KIAA1328Q86T90 577 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 SNX29Q8TEQ0 813 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 BTBD18B2RXH4 712 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 CFBP00751 764 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 ERCC4Q92889 916 aaPredicted RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 KIFC2Q96AC6 838 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 GPR101Q96P66 508 aaPredicted RBP8.47□□□□□ -1.05
TCF4-216ENST00000562680 SERPINA10Q9UK55 444 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 RCOR1Q9UKL0 485 aa8.47□□□□□ -1.05
TCF4-216ENST00000562680 SRGNP10124 158 aa8.46□□□□□ -1.05
TCF4-216ENST00000562680 NSMFQ6X4W1 530 aa8.46□□□□□ -1.05
TCF4-216ENST00000562680 LEKR1Q6ZMV7 388 aa8.46□□□□□ -1.05
TCF4-216ENST00000562680 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.46□□□□□ -1.05
TCF4-216ENST00000562680 AOPEPQ8N6M6 819 aa8.46□□□□□ -1.05
TCF4-216ENST00000562680 KCNB2Q92953 911 aa8.46□□□□□ -1.05
TCF4-216ENST00000562680 NUP88Q99567 741 aaPredicted RBP8.46□□□□□ -1.05
TCF4-216ENST00000562680 ZNF341Q9BYN7 854 aa8.46□□□□□ -1.05
TCF4-216ENST00000562680 RASSF4Q9H2L5 321 aa8.46□□□□□ -1.05
TCF4-216ENST00000562680 DAGLAQ9Y4D2 1042 aa8.46□□□□□ -1.05
TCF4-216ENST00000562680 LRRC37A3O60309 1634 aa8.46□□□□□ -1.05
TCF4-216ENST00000562680 GPR75-ASB3A0A0A6YYF3 556 aa8.46□□□□□ -1.06
TCF4-216ENST00000562680 TXKP42681 527 aa8.46□□□□□ -1.06
TCF4-216ENST00000562680 FAM173BQ6P4H8 233 aa8.46□□□□□ -1.06
TCF4-216ENST00000562680 C15orf52Q6ZUT6 534 aaKnown RBP8.46□□□□□ -1.06
TCF4-216ENST00000562680 TMC6Q7Z403 805 aa8.46□□□□□ -1.06
TCF4-216ENST00000562680 CABP7Q86V35 215 aa8.46□□□□□ -1.06
TCF4-216ENST00000562680 AGBL3Q8NEM8 1001 aa8.46□□□□□ -1.06
TCF4-216ENST00000562680 ANAPC4Q9UJX5 808 aa8.46□□□□□ -1.06
TCF4-216ENST00000562680 DNM3Q9UQ16 869 aa8.46□□□□□ -1.06
TCF4-216ENST00000562680 CCNA1P78396 465 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms