RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 DISP1Q96F81 1524 aa7.42□□□□□ -1.22
SMG1-206ENST00000562668 RAP1GAPP47736 663 aa7.41□□□□□ -1.22
SMG1-206ENST00000562668 MLECQ14165 292 aa7.41□□□□□ -1.22
SMG1-206ENST00000562668 CWF19L2Q2TBE0 894 aaKnown RBP7.41□□□□□ -1.22
SMG1-206ENST00000562668 SYDE1Q6ZW31 735 aaPredicted RBP7.41□□□□□ -1.22
SMG1-206ENST00000562668 FBXO15Q8NCQ5 510 aaPredicted RBP7.41□□□□□ -1.22
SMG1-206ENST00000562668 DIRC2Q96SL1 478 aa7.41□□□□□ -1.22
SMG1-206ENST00000562668 BCL2L13Q9BXK5 485 aa7.41□□□□□ -1.22
SMG1-206ENST00000562668 SUPT16HQ9Y5B9 1047 aaKnown RBP7.41□□□□□ -1.22
SMG1-206ENST00000562668 RBM47A0AV96 593 aaKnown RBP7.4□□□□□ -1.22
SMG1-206ENST00000562668 ZGLP1P0C6A0 271 aa7.4□□□□□ -1.22
SMG1-206ENST00000562668 FBXL19Q6PCT2 694 aa7.4□□□□□ -1.22
SMG1-206ENST00000562668 PDZD8Q8NEN9 1154 aa7.4□□□□□ -1.22
SMG1-206ENST00000562668 GIPC2Q8TF65 315 aa7.4□□□□□ -1.22
SMG1-206ENST00000562668 KIF2CQ99661 725 aa7.4□□□□□ -1.22
SMG1-206ENST00000562668 EPB41L4BQ9H329 900 aa7.4□□□□□ -1.22
SMG1-206ENST00000562668 ROBO2Q9HCK4 1378 aa7.4□□□□□ -1.22
SMG1-206ENST00000562668 PRG4Q92954 1404 aaPredicted RBP7.4□□□□□ -1.22
SMG1-206ENST00000562668 SAMD9Q5K651 1589 aa7.39□□□□□ -1.23
SMG1-206ENST00000562668 GOLGA3Q08378 1498 aa7.39□□□□□ -1.23
SMG1-206ENST00000562668 SHISA3A0PJX4 238 aa7.39□□□□□ -1.23
SMG1-206ENST00000562668 RGS13O14921 159 aa7.39□□□□□ -1.23
SMG1-206ENST00000562668 EIF4A3P38919 411 aaKnown RBP7.39□□□□□ -1.23
SMG1-206ENST00000562668 CHMP4BP1P59074 171 aa7.39□□□□□ -1.23
SMG1-206ENST00000562668 MRPL58Q14197 206 aaKnown RBP7.39□□□□□ -1.23
SMG1-206ENST00000562668 SPOCD1Q6ZMY3 1216 aa7.39□□□□□ -1.23
SMG1-206ENST00000562668 CILP2Q8IUL8 1156 aa7.39□□□□□ -1.23
SMG1-206ENST00000562668 SP110Q9HB58 689 aa7.39□□□□□ -1.23
SMG1-206ENST00000562668 GMIPQ9P107 970 aa7.39□□□□□ -1.23
SMG1-206ENST00000562668 KIAA0556O60303 1618 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 GBP1P32455 592 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 TRHRP34981 398 aaPredicted RBP7.38□□□□□ -1.23
SMG1-206ENST00000562668 RNF4P78317 190 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 ZNF326Q5BKZ1 582 aaKnown RBP7.38□□□□□ -1.23
SMG1-206ENST00000562668 ARSHQ5FYA8 562 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 HS2ST1Q7LGA3 356 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 LILRA2Q8N149 483 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 OXR1Q8N573 874 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 DHX38Q92620 1227 aaKnown RBP7.38□□□□□ -1.23
SMG1-206ENST00000562668 TOX2Q96NM4 488 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 RNF32Q9H0A6 362 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 BRMS1Q9HCU9 246 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 DCP1AQ9NPI6 582 aaPredicted RBP7.38□□□□□ -1.23
SMG1-206ENST00000562668 PCDHB14Q9Y5E9 798 aa7.38□□□□□ -1.23
SMG1-206ENST00000562668 FITM1A5D6W6 292 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 SLC22A31A6NKX4 558 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 GREM1O60565 184 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 UBOX5O94941 541 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 ATE1O95260 518 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 RAG1P15918 1043 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 CRKP46108 304 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 TEKQ02763 1124 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 CLEC16AQ2KHT3 1053 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 OVOS1Q6IE37 1185 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 SYTL4Q96C24 671 aaPredicted RBP7.37□□□□□ -1.23
SMG1-206ENST00000562668 VWCEQ96DN2 955 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 BCL11AQ9H165 835 aa7.37□□□□□ -1.23
SMG1-206ENST00000562668 KRT1P04264 644 aa7.36□□□□□ -1.23
SMG1-206ENST00000562668 NR0B2Q15466 257 aa7.36□□□□□ -1.23
SMG1-206ENST00000562668 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
SMG1-206ENST00000562668 ASCC2Q9H1I8 757 aaPredicted RBP7.36□□□□□ -1.23
SMG1-206ENST00000562668 GGT7Q9UJ14 662 aa7.36□□□□□ -1.23
SMG1-206ENST00000562668 NFIBO00712 420 aa7.35□□□□□ -1.23
SMG1-206ENST00000562668 C1QTNF9P0C862 333 aa7.35□□□□□ -1.23
SMG1-206ENST00000562668 CHRNEQ04844 493 aa7.35□□□□□ -1.23
SMG1-206ENST00000562668 DUSP4Q13115 394 aa7.35□□□□□ -1.23
SMG1-206ENST00000562668 NMIQ13287 307 aaPredicted RBP7.35□□□□□ -1.23
SMG1-206ENST00000562668 TIGD5Q53EQ6 642 aa7.35□□□□□ -1.23
SMG1-206ENST00000562668 LCE1DQ5T752 114 aa7.35□□□□□ -1.23
SMG1-206ENST00000562668 SYTL5Q8TDW5 730 aaPredicted RBP7.35□□□□□ -1.23
SMG1-206ENST00000562668 ZNF296Q8WUU4 475 aaPredicted RBP7.35□□□□□ -1.23
SMG1-206ENST00000562668 HDAC8Q9BY41 377 aa7.35□□□□□ -1.23
SMG1-206ENST00000562668 C19orf44Q9H6X5 657 aa7.35□□□□□ -1.23
SMG1-206ENST00000562668 ADAMTS1Q9UHI8 967 aa7.35□□□□□ -1.23
SMG1-206ENST00000562668 ANKLE2Q86XL3 938 aa7.34□□□□□ -1.23
SMG1-206ENST00000562668 C1QL4Q86Z23 238 aa7.34□□□□□ -1.23
SMG1-206ENST00000562668 IRF2BP1Q8IU81 584 aa7.34□□□□□ -1.23
SMG1-206ENST00000562668 LRRC56Q8IYG6 542 aaPredicted RBP7.34□□□□□ -1.23
SMG1-206ENST00000562668 ANKS4BQ8N8V4 417 aa7.34□□□□□ -1.23
SMG1-206ENST00000562668 ENOX1Q8TC92 643 aaKnown RBP7.34□□□□□ -1.23
SMG1-206ENST00000562668 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.34□□□□□ -1.23
SMG1-206ENST00000562668 SLC6A17Q9H1V8 727 aa7.34□□□□□ -1.23
SMG1-206ENST00000562668 EHMT1Q9H9B1 1298 aa7.34□□□□□ -1.23
SMG1-206ENST00000562668 KCNK12Q9HB15 430 aa7.34□□□□□ -1.23
SMG1-206ENST00000562668 CFPP27918 469 aa7.33□□□□□ -1.24
SMG1-206ENST00000562668 POLR2BP30876 1174 aaKnown RBP7.33□□□□□ -1.24
SMG1-206ENST00000562668 CDCP2Q5VXM1 449 aa7.33□□□□□ -1.24
SMG1-206ENST00000562668 RNF111Q6ZNA4 994 aa7.33□□□□□ -1.24
SMG1-206ENST00000562668 SLC26A8Q96RN1 970 aa7.33□□□□□ -1.24
SMG1-206ENST00000562668 CNNM2Q9H8M5 875 aa7.33□□□□□ -1.24
SMG1-206ENST00000562668 CWC22Q9HCG8 908 aaKnown RBP7.33□□□□□ -1.24
SMG1-206ENST00000562668 CD320Q9NPF0 282 aa7.33□□□□□ -1.24
SMG1-206ENST00000562668 UBP1Q9NZI7 540 aa7.33□□□□□ -1.24
SMG1-206ENST00000562668 ADCY10Q96PN6 1610 aa7.33□□□□□ -1.24
SMG1-206ENST00000562668 TNIKQ9UKE5 1360 aa7.33□□□□□ -1.24
SMG1-206ENST00000562668 EFCAB5A4FU69 1503 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 ARHGAP35Q9NRY4 1499 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 TMEM253P0C7T8 217 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 MED14OSP0DP75 135 aa7.32□□□□□ -1.24
SMG1-206ENST00000562668 RAD51AP2Q09MP3 1159 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms