RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 FEM1BQ9UK73 627 aa19.18■□□□□ 0.66
USB1-206ENST00000562534 GPR25O00155 361 aa19.17■□□□□ 0.66
USB1-206ENST00000562534 FOXN1O15353 648 aa19.17■□□□□ 0.66
USB1-206ENST00000562534 FLOT1O75955 427 aa19.17■□□□□ 0.66
USB1-206ENST00000562534 LIFRP42702 1097 aa19.17■□□□□ 0.66
USB1-206ENST00000562534 HERVK_113P62684 666 aa19.17■□□□□ 0.66
USB1-206ENST00000562534 FAM83BQ5T0W9 1011 aa19.17■□□□□ 0.66
USB1-206ENST00000562534 C17orf99Q6UX52 265 aa19.17■□□□□ 0.66
USB1-206ENST00000562534 PRPF38AQ8NAV1 312 aaKnown RBP19.17■□□□□ 0.66
USB1-206ENST00000562534 R3HDMLQ9H3Y0 253 aa19.17■□□□□ 0.66
USB1-206ENST00000562534 UPF2Q9HAU5 1272 aaKnown RBP19.17■□□□□ 0.66
USB1-206ENST00000562534 MYPNQ86TC9 1320 aa19.17■□□□□ 0.66
USB1-206ENST00000562534 PLA2G6O60733 806 aa19.16■□□□□ 0.66
USB1-206ENST00000562534 DSG3P32926 999 aa19.16■□□□□ 0.66
USB1-206ENST00000562534 LBX2Q6XYB7 198 aa19.16■□□□□ 0.66
USB1-206ENST00000562534 ZSWIM6Q9HCJ5 1215 aa19.16■□□□□ 0.66
USB1-206ENST00000562534 LOC285556D6RIA3 1793 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 SNHG28P0DPA3 235 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 PDHBP11177 359 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 CASTP20810 708 aaKnown RBP19.15■□□□□ 0.66
USB1-206ENST00000562534 FGD1P98174 961 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 SP3Q02447 781 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 GPATCH4Q5T3I0 446 aaKnown RBP19.15■□□□□ 0.66
USB1-206ENST00000562534 NFXL1Q6ZNB6 911 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 RUFY3Q7L099 469 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 CATIPQ7Z7H3 387 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 FAM160B2Q86V87 743 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 MB21D1Q8N884 522 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 NUP88Q99567 741 aaPredicted RBP19.15■□□□□ 0.66
USB1-206ENST00000562534 LY9Q9HBG7 655 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 CPA4Q9UI42 421 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 TSKSQ9UJT2 592 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 MTMR7Q9Y216 660 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 CYP46A1Q9Y6A2 500 aa19.15■□□□□ 0.66
USB1-206ENST00000562534 MYH4Q9Y623 1939 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 CCDC69A6NI79 296 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 TMEM232C9JQI7 657 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 SH2B2O14492 632 aaPredicted RBP19.14■□□□□ 0.65
USB1-206ENST00000562534 FKTNO75072 461 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 FDX1P10109 184 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 RPS6KB1P23443 525 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 STAT2P52630 851 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 SYNE3Q6ZMZ3 975 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 FBXL16Q8N461 479 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 IL17RAQ96F46 866 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 SLF1Q9BQI6 1058 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 PPP1R9AQ9ULJ8 1098 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 ISY1Q9ULR0 285 aaKnown RBP19.14■□□□□ 0.65
USB1-206ENST00000562534 ADAMTS5Q9UNA0 930 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 RABGAP1Q9Y3P9 1069 aa19.14■□□□□ 0.65
USB1-206ENST00000562534 HSPA8P11142 646 aaKnown RBP19.13■□□□□ 0.65
USB1-206ENST00000562534 BCRP11274 1271 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 COL9A3Q14050 684 aaPredicted RBP19.13■□□□□ 0.65
USB1-206ENST00000562534 ARHGEF6Q15052 776 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 CCDC96Q2M329 555 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 KCTD1Q719H9 257 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 SGMS1Q86VZ5 419 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 ANKRD13CQ8N6S4 541 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 GPRC5AQ8NFJ5 357 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 MAP3K14Q99558 947 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 BACH2Q9BYV9 841 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 C22orf23Q9BZE7 217 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 RBPJLQ9UBG7 517 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 ADGRA2Q96PE1 1338 aa19.13■□□□□ 0.65
USB1-206ENST00000562534 SPDYE16A6NNV3 312 aaPredicted RBP19.12■□□□□ 0.65
USB1-206ENST00000562534 PARP1P09874 1014 aaKnown RBP19.12■□□□□ 0.65
USB1-206ENST00000562534 CALM1P0DP23 149 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 CALM2P0DP24 149 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 CALM3P0DP25 149 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 LBX1P52954 281 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 ZNF543Q08ER8 600 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 IKQ13123 557 aaPredicted RBP19.12■□□□□ 0.65
USB1-206ENST00000562534 KIF22Q14807 665 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 FAM110CQ1W6H9 321 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 ASPRV1Q53RT3 343 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 BTNL9Q6UXG8 535 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 CHMP4CQ96CF2 233 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 LRRC2Q9BYS8 371 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 FBXO28Q9NVF7 368 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 MORF4L1Q9UBU8 362 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 SLC12A7Q9Y666 1083 aa19.12■□□□□ 0.65
USB1-206ENST00000562534 ZBED4O75132 1171 aa19.11■□□□□ 0.65
USB1-206ENST00000562534 CPA1P15085 419 aa19.11■□□□□ 0.65
USB1-206ENST00000562534 TROAPQ12815 778 aa19.11■□□□□ 0.65
USB1-206ENST00000562534 SAMD1Q6SPF0 538 aaPredicted RBP19.11■□□□□ 0.65
USB1-206ENST00000562534 Q6ZUG5 572 aa19.11■□□□□ 0.65
USB1-206ENST00000562534 ZNF296Q8WUU4 475 aaPredicted RBP19.11■□□□□ 0.65
USB1-206ENST00000562534 KIFC2Q96AC6 838 aa19.11■□□□□ 0.65
USB1-206ENST00000562534 ERO1AQ96HE7 468 aa19.11■□□□□ 0.65
USB1-206ENST00000562534 SENP2Q9HC62 589 aa19.11■□□□□ 0.65
USB1-206ENST00000562534 GPCPD1Q9NPB8 672 aa19.11■□□□□ 0.65
USB1-206ENST00000562534 GPHNQ9NQX3 736 aaPredicted RBP19.11■□□□□ 0.65
USB1-206ENST00000562534 CTDP1Q9Y5B0 961 aaPredicted RBP19.11■□□□□ 0.65
USB1-206ENST00000562534 VWA5AO00534 786 aa19.1■□□□□ 0.65
USB1-206ENST00000562534 DDAH1O94760 285 aa19.1■□□□□ 0.65
USB1-206ENST00000562534 RBM25P49756 843 aaKnown RBP19.1■□□□□ 0.65
USB1-206ENST00000562534 CCNA1P78396 465 aa19.1■□□□□ 0.65
USB1-206ENST00000562534 ZNF654Q8IZM8 581 aa19.1■□□□□ 0.65
USB1-206ENST00000562534 ATG4CQ96DT6 458 aa19.1■□□□□ 0.65
USB1-206ENST00000562534 TCEANC2Q96MN5 208 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms