RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDH13-205ENST00000562307 BRMS1Q9HCU9 246 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 DDX19AQ9NUU7 478 aaKnown RBP10.97□□□□□ -0.65
CDH13-205ENST00000562307 BARHL2Q9NY43 387 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 PCDHA7Q9UN72 937 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 SHTN1A0MZ66 631 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 hCG_1984214I3L0E3 225 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 M0R2N6 131 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 LMNB1P20700 586 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 TNNI2P48788 182 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 MRE11P49959 708 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 NLRP5P59047 1200 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 JAG1P78504 1218 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 SEPT2Q15019 361 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 SF3A1Q15459 793 aaKnown RBP10.96□□□□□ -0.65
CDH13-205ENST00000562307 AXDND1Q5T1B0 1012 aaPredicted RBP10.96□□□□□ -0.65
CDH13-205ENST00000562307 RBM26Q5T8P6 1007 aaKnown RBP10.96□□□□□ -0.65
CDH13-205ENST00000562307 CLEC10AQ8IUN9 316 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 ZNF713Q8N859 430 aaPredicted RBP10.96□□□□□ -0.65
CDH13-205ENST00000562307 DAGLBQ8NCG7 672 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 GMCL1P1Q8NEA9 526 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 ENGASEQ8NFI3 743 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 DCAF4Q8WV16 495 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 MTMR8Q96EF0 704 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 RRP36Q96EU6 259 aaKnown RBP10.96□□□□□ -0.65
CDH13-205ENST00000562307 CABP5Q9NP86 173 aa10.96□□□□□ -0.65
CDH13-205ENST00000562307 CNOT7Q9UIV1 285 aaKnown RBP10.96□□□□□ -0.65
CDH13-205ENST00000562307 ZNF541Q9H0D2 1346 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 FAM237AA0A1B0GTK4 181 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 STXBP3O00186 592 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 CMA1P23946 247 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 ME1P48163 572 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 TRAPPC10P48553 1259 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 TNFAIP1Q13829 316 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 SHROOM1Q2M3G4 852 aaPredicted RBP10.95□□□□□ -0.66
CDH13-205ENST00000562307 WWC2Q6AWC2 1192 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 RBM43Q6ZSC3 357 aaKnown RBP10.95□□□□□ -0.66
CDH13-205ENST00000562307 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 RASGRP2Q7LDG7 609 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 CCAR1Q8IX12 1150 aaKnown RBP10.95□□□□□ -0.66
CDH13-205ENST00000562307 MICALL2Q8IY33 904 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 LRRC47Q8N1G4 583 aaKnown RBP10.95□□□□□ -0.66
CDH13-205ENST00000562307 JMYQ8N9B5 988 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 CCDC148Q8NFR7 591 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 BICD2Q8TD16 824 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 TEPSINQ96N21 525 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 TMEM39BQ9GZU3 492 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 VEZTQ9HBM0 779 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 PCDHA4Q9UN74 947 aa10.95□□□□□ -0.66
CDH13-205ENST00000562307 MYH8P13535 1937 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 ESYT2A0FGR8 921 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 SYCE3A1L190 88 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 CUTAO60888 179 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 NR1I2O75469 434 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 GDF11O95390 407 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 EGFRP00533 1210 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 GH2P01242 217 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 ICA1Q05084 483 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 SNW1Q13573 536 aaKnown RBP10.94□□□□□ -0.66
CDH13-205ENST00000562307 RASA3Q14644 834 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 EARS2Q5JPH6 523 aaKnown RBP10.94□□□□□ -0.66
CDH13-205ENST00000562307 TYW1BQ6NUM6 668 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 BLIDQ8IZY5 108 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 GPC2Q8N158 579 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 CCDC12Q8WUD4 166 aaPredicted RBP10.94□□□□□ -0.66
CDH13-205ENST00000562307 MRPS27Q92552 414 aaKnown RBP10.94□□□□□ -0.66
CDH13-205ENST00000562307 GMCL1Q96IK5 515 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 PIGSQ96S52 555 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 SYT17Q9BSW7 474 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 UBA5Q9GZZ9 404 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 ZMYND12Q9H0C1 365 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 CPVLQ9H3G5 476 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 CLSTN2Q9H4D0 955 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 JMJD4Q9H9V9 463 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 GRPEL1Q9HAV7 217 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 DACT1Q9NYF0 836 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 CEP131Q9UPN4 1083 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 MTMR7Q9Y216 660 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 GJA3Q9Y6H8 435 aa10.94□□□□□ -0.66
CDH13-205ENST00000562307 FRMPD2Q68DX3 1309 aaPredicted RBP10.93□□□□□ -0.66
CDH13-205ENST00000562307 PNMA6FA0A0J9YX94 578 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 F5H6K3 240 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 H7C1D1 291 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 BMP15O95972 392 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 PTPREP23469 700 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 CAP2P40123 477 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 FAM160A1Q05DH4 1040 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 KLRC3Q07444 240 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 SLFN13Q68D06 897 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 BTNL9Q6UXG8 535 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 CCDC73Q6ZRK6 1079 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 SAMD7Q7Z3H4 446 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 ADGRF4Q8IZF3 695 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 FMR1NBQ8N0W7 255 aaPredicted RBP10.93□□□□□ -0.66
CDH13-205ENST00000562307 PIBF1Q8WXW3 757 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 GPKOWQ92917 476 aaPredicted RBP eCLIP10.93□□□□□ -0.66
CDH13-205ENST00000562307 FUCA2Q9BTY2 467 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 NUP62CLQ9H1M0 184 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 GOLPH3LQ9H4A5 285 aa10.93□□□□□ -0.66
CDH13-205ENST00000562307 GPCPD1Q9NPB8 672 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms