RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 LRRC41Q15345 812 aa12.38□□□□□ -0.43
BBS4-205ENST00000562219 SHHQ15465 462 aa12.38□□□□□ -0.43
BBS4-205ENST00000562219 PRAMEF19Q5SWL8 479 aa12.38□□□□□ -0.43
BBS4-205ENST00000562219 SIAH1Q8IUQ4 282 aa12.38□□□□□ -0.43
BBS4-205ENST00000562219 AMOTL1Q8IY63 956 aa12.38□□□□□ -0.43
BBS4-205ENST00000562219 CCDC17Q96LX7 622 aa12.38□□□□□ -0.43
BBS4-205ENST00000562219 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.38□□□□□ -0.436e-8■■■■■ 46.2
BBS4-205ENST00000562219 PAG1Q9NWQ8 432 aa12.38□□□□□ -0.43
BBS4-205ENST00000562219 PRKAB2O43741 272 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 HMMRO75330 724 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 RARBP10826 455 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 TMEM132BQ14DG7 1078 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 C9orf50Q5SZB4 431 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
BBS4-205ENST00000562219 BADQ92934 168 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 FERMT2Q96AC1 680 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 DDRGK1Q96HY6 314 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 MMP19Q99542 508 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 COL25A1Q9BXS0 654 aaPredicted RBP12.37□□□□□ -0.43
BBS4-205ENST00000562219 ADAMTS5Q9UNA0 930 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 PHF24Q9UPV7 400 aa12.37□□□□□ -0.43
BBS4-205ENST00000562219 VCANP13611 3396 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 CYP2D7A0A087X1C5 515 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 EEF2P13639 858 aaKnown RBP12.36□□□□□ -0.43
BBS4-205ENST00000562219 CDK8P49336 464 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 SMAD3P84022 425 aaKnown RBP12.36□□□□□ -0.43
BBS4-205ENST00000562219 KCTD2Q14681 263 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 SLFNL1Q499Z3 407 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 C16orf86Q6ZW13 317 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 SH3RF1Q7Z6J0 888 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 RIOX2Q8IUF8 465 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 RPAP2Q8IXW5 612 aaPredicted RBP12.36□□□□□ -0.43
BBS4-205ENST00000562219 CDX2Q99626 313 aaPredicted RBP12.36□□□□□ -0.43
BBS4-205ENST00000562219 TINF2Q9BSI4 451 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 KANSL2Q9H9L4 492 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 XPNPEP3Q9NQH7 507 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 FBXO28Q9NVF7 368 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 DIS3Q9Y2L1 958 aaKnown RBP12.36□□□□□ -0.43
BBS4-205ENST00000562219 ZBED9Q6R2W3 1325 aa12.36□□□□□ -0.43
BBS4-205ENST00000562219 TRIM43BA6NCK2 446 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 USP17L12C9JPN9 530 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 USP17L21D6R901 530 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 SMIM22K7EJ46 135 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 VWA5AO00534 786 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 RAB11FIP3O75154 756 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 PGK2P07205 417 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 MS4A1P11836 297 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 ATP5JP18859 108 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 COPB2P35606 906 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 TLE2Q04725 743 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 RNF180Q86T96 592 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 TRIM43Q96BQ3 446 aaPredicted RBP12.35□□□□□ -0.43
BBS4-205ENST00000562219 HAUS7Q99871 368 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 BCL11AQ9H165 835 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 BOLA2Q9H3K6 86 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 ZNF214Q9UL59 606 aaPredicted RBP12.35□□□□□ -0.43
BBS4-205ENST00000562219 PPP1R9AQ9ULJ8 1098 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 TACC3Q9Y6A5 838 aa12.35□□□□□ -0.43
BBS4-205ENST00000562219 GBF1Q92538 1859 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 A0A1W2PQ45 241 aaPredicted RBP12.34□□□□□ -0.43
BBS4-205ENST00000562219 A0A1W2PQY0 241 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 PGK1P00558 417 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 CLTBP09497 229 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 AKR1A1P14550 325 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 STAT3P40763 770 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 UBE3CQ15386 1083 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 ZNF792Q3KQV3 632 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 SIRT2Q8IXJ6 389 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 SEMA6BQ9H3T3 888 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 DDX19BQ9UMR2 479 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 CNPY2Q9Y2B0 182 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 SLC4A4Q9Y6R1 1079 aa12.34□□□□□ -0.43
BBS4-205ENST00000562219 KIAA0355O15063 1070 aa12.33□□□□□ -0.44
BBS4-205ENST00000562219 RAD21O60216 631 aa12.33□□□□□ -0.44
BBS4-205ENST00000562219 ZNF865P0CJ78 1059 aaPredicted RBP12.33□□□□□ -0.44
BBS4-205ENST00000562219 TAL1P17542 331 aaPredicted RBP12.33□□□□□ -0.44
BBS4-205ENST00000562219 ITGB8P26012 769 aa12.33□□□□□ -0.44
BBS4-205ENST00000562219 FAM83BQ5T0W9 1011 aa12.33□□□□□ -0.44
BBS4-205ENST00000562219 CTR9Q6PD62 1173 aa12.33□□□□□ -0.44
BBS4-205ENST00000562219 REPS2Q8NFH8 660 aa12.33□□□□□ -0.44
BBS4-205ENST00000562219 MAFAQ8NHW3 353 aaPredicted RBP12.33□□□□□ -0.44
BBS4-205ENST00000562219 RNPC3Q96LT9 517 aaKnown RBP12.33□□□□□ -0.44
BBS4-205ENST00000562219 TTYH1Q9H313 450 aaPredicted RBP12.33□□□□□ -0.44
BBS4-205ENST00000562219 ZBTB40Q9NUA8 1239 aa12.33□□□□□ -0.44
BBS4-205ENST00000562219 ARPP21Q9UBL0 812 aaPredicted RBP12.33□□□□□ -0.44
BBS4-205ENST00000562219 LRRC37A2A6NM11 1700 aa12.33□□□□□ -0.44
BBS4-205ENST00000562219 TMEM265A0A087WTH1 108 aa12.32□□□□□ -0.44
BBS4-205ENST00000562219 PQBP1O60828 265 aaKnown RBP12.32□□□□□ -0.44
BBS4-205ENST00000562219 ADAMTS4O75173 837 aa12.32□□□□□ -0.44
BBS4-205ENST00000562219 CHGBP05060 677 aa12.32□□□□□ -0.44
BBS4-205ENST00000562219 RAG1P15918 1043 aa12.32□□□□□ -0.44
BBS4-205ENST00000562219 ZSCAN25Q6NSZ9 544 aa12.32□□□□□ -0.44
BBS4-205ENST00000562219 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
BBS4-205ENST00000562219 LENG1Q96BZ8 264 aaPredicted RBP12.32□□□□□ -0.44
BBS4-205ENST00000562219 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
BBS4-205ENST00000562219 TSEN34Q9BSV6 310 aaKnown RBP12.32□□□□□ -0.44
BBS4-205ENST00000562219 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.32□□□□□ -0.44
BBS4-205ENST00000562219 TEX13BQ9BXU2 312 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms