RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 HELLSQ9NRZ9 838 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 HOXC10Q9NYD6 342 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 MKI67P46013 3256 aaKnown RBP11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 IGKV6D-41A0A0C4DH26 115 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 FARP2O94887 1054 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 SGPL1O95470 568 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 FGAP02671 866 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 SLC3A2P08195 630 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 SDSP20132 328 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 RGS2P41220 211 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 PDE4BQ07343 736 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 TMEM132BQ14DG7 1078 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 SKAP1Q86WV1 359 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 NKX2-3Q8TAU0 364 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 DIS3LQ8TF46 1054 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 LPAR1Q92633 364 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 DPF3Q92784 378 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 RLFQ13129 1914 aa11.26□□□□□ -0.61
NSMCE1-203ENST00000562039 MYH4Q9Y623 1939 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 TSPY2A6NKD2 308 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 CNGA1P29973 690 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 CYP2C19P33261 490 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 SNAP25P60880 206 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 CACNB2Q08289 660 aaPredicted RBP11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 PRPF38BQ5VTL8 546 aaKnown RBP11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 ANO1Q5XXA6 986 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 SLFN13Q68D06 897 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 CPXCR1Q8N123 301 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 USP6NLQ92738 828 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 KIFC2Q96AC6 838 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 APBA2Q99767 749 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 ZNF287Q9HBT7 754 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 HMX1Q9NP08 348 aaPredicted RBP11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 DIAPH3Q9NSV4 1193 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 MTMR4Q9NYA4 1195 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 NYAP2Q9P242 653 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 PPP1R9AQ9ULJ8 1098 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 CCDC171Q6TFL3 1326 aa11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 COL11A1P12107 1806 aaPredicted RBP11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 GREB1LQ9C091 1923 aaPredicted RBP11.25□□□□□ -0.61
NSMCE1-203ENST00000562039 SLC15A5A6NIM6 579 aa11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 COBLO75128 1261 aa11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 PGK2P07205 417 aa11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 TAL1P17542 331 aaPredicted RBP11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 ADORA2AP29274 412 aa11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 PRAMEF19Q5SWL8 479 aa11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 DPP9Q86TI2 863 aa11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 PAWRQ96IZ0 340 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 SLF1Q9BQI6 1058 aa11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 PAK6Q9NQU5 681 aaPredicted RBP11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 STX8Q9UNK0 236 aa11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 RPTORQ8N122 1335 aa11.24□□□□□ -0.61
NSMCE1-203ENST00000562039 VWA5AO00534 786 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 TTLL1O95922 423 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 MYCNP04198 464 aaPredicted RBP11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 GSPT1P15170 499 aaKnown RBP11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 MCCP23508 829 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 STAT3P40763 770 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 IKQ13123 557 aaPredicted RBP11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 GRB14Q14449 540 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 KCTD1Q719H9 257 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 TBC1D10CQ8IV04 446 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 MMP19Q99542 508 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 ZKSCAN3Q9BRR0 538 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 IL25Q9H293 177 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 RIPK3Q9Y572 518 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 CTDP1Q9Y5B0 961 aaPredicted RBP11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 PARP14Q460N5 1801 aa11.23□□□□□ -0.61
NSMCE1-203ENST00000562039 A0A0G2JMZ2 1700 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 TMEM232C9JQI7 657 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 H0YGN5 161 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 XRCC5P13010 732 aaKnown RBP11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 ALX1Q15699 326 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 TTC22Q5TAA0 569 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 MFSD14CQ5VZR4 134 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 SNRNP48Q6IEG0 339 aaKnown RBP11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 MB21D1Q8N884 522 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 TRPV1Q8NER1 839 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 REPS2Q8NFH8 660 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 NBPF3Q9H094 633 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 HOMER2Q9NSB8 354 aa11.22□□□□□ -0.61
NSMCE1-203ENST00000562039 CEP290O15078 2479 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 NEDD4P46934 1319 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 FRMPD2Q68DX3 1309 aaPredicted RBP11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 BMP3P12645 472 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 CCDC96Q2M329 555 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 MAP3K21Q5TCX8 1036 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 CCDC174Q6PII3 467 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 SHCBP1Q8NEM2 672 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 MKL1Q969V6 931 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 CRISPLD2Q9H0B8 497 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms