RNA–Protein interactions for RNA: ENST00000561990.3

AC140658.4-201, humanhuman

BASIC

Gene AC140658.4, Length 352 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC140658.4-201ENST00000561990 ECE1P42892 770 aa16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 AKAP17AQ02040 695 aaKnown RBP16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 STK3Q13188 491 aa16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 MTMR2Q13614 643 aa16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 GRM4Q14833 912 aa16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 CCDC96Q2M329 555 aa16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 SHROOM1Q2M3G4 852 aaPredicted RBP16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 CLEC10AQ8IUN9 316 aa16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 TMX3Q96JJ7 454 aa16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 LARP6Q9BRS8 491 aaKnown RBP16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 KIF3AQ9Y496 699 aa16.76■□□□□ 0.27
AC140658.4-201ENST00000561990 IRF6O14896 467 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 PDHBP11177 359 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 CETPP11597 493 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 INHBEP58166 350 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 IKQ13123 557 aaPredicted RBP16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 ZYXQ15942 572 aaKnown RBP16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 ME3Q16798 604 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 SH3D19Q5HYK7 790 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 FAM160B2Q86V87 743 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 TRIM22Q8IYM9 498 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 WNK4Q96J92 1243 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 C12orf42Q96LP6 360 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 SENP2Q9HC62 589 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 KCNH4Q9UQ05 1017 aa16.75■□□□□ 0.27
AC140658.4-201ENST00000561990 KLRF2D3W0D1 207 aa16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 NDUFB10O96000 172 aa16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 SNHG28P0DPA3 235 aa16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 FDX1P10109 184 aa16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 HMGCS2P54868 508 aa16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 CCT2P78371 535 aaKnown RBP16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 TRAF1Q13077 416 aa16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 SPRYD7Q5W111 196 aa16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 GTF3C6Q969F1 213 aa16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 FEM1BQ9UK73 627 aa16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 CTDP1Q9Y5B0 961 aaPredicted RBP16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 PHIPQ8WWQ0 1821 aa16.74■□□□□ 0.27
AC140658.4-201ENST00000561990 A0A0G2JLL6 359 aaPredicted RBP16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 PALM3A6NDB9 673 aaPredicted RBP16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 MANSC4A6NHS7 340 aaPredicted RBP16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 PLA2G6O60733 806 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 STAT2P52630 851 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 ZNF543Q08ER8 600 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 DEFB115Q30KQ5 88 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 OTUD7BQ6GQQ9 843 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 GADL1Q6ZQY3 521 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 PAXIP1Q6ZW49 1069 aaPredicted RBP16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 PRRT2Q7Z6L0 340 aaPredicted RBP16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 CCDC84Q86UT8 332 aaPredicted RBP16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 CCDC144CPQ8IYA2 1237 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 REM2Q8IYK8 340 aaPredicted RBP16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 SPICE1Q8N0Z3 855 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 WASF1Q92558 559 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 INTS4Q96HW7 963 aaKnown RBP16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 MYL10Q9BUA6 226 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 NID2Q14112 1375 aa16.73■□□□□ 0.27
AC140658.4-201ENST00000561990 USP17L15C9J2P7 530 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 USP17L13C9JLJ4 530 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 TMEM232C9JQI7 657 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 USP17L11C9JVI0 530 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 USP17L18D6R9N7 530 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 USP17L22D6RA61 530 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 USP17L17D6RBQ6 530 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 USP17L19D6RCP7 530 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 USP17L20D6RJB6 530 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 RXRAP19793 462 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 HMGN5P82970 282 aaKnown RBP16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 SSRP1Q08945 709 aaKnown RBP16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 USP17L24Q0WX57 530 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 CCDC83Q8IWF9 413 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 TANGO6Q9C0B7 1094 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 GPCPD1Q9NPB8 672 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 EMILIN3Q9NT22 766 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 HOXC10Q9NYD6 342 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 MAD2L2Q9UI95 211 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 PNMA3Q9UL41 463 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 PNMA2Q9UL42 364 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
AC140658.4-201ENST00000561990 CD2BP2O95400 341 aaKnown RBP16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 PDIA4P13667 645 aaKnown RBP16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 IFNAR1P17181 557 aa16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 OSBPP22059 807 aa16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 ADD1P35611 737 aaKnown RBP16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 SCRN1Q12765 414 aa16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 SREBF2Q12772 1141 aa16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 FAM83BQ5T0W9 1011 aa16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 KCTD1Q719H9 257 aa16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 NECAB1Q8N987 351 aa16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 PRPF38AQ8NAV1 312 aaKnown RBP16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 SEC63Q9UGP8 760 aaKnown RBP16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.27
AC140658.4-201ENST00000561990 XBP1P17861 261 aa16.7■□□□□ 0.26
AC140658.4-201ENST00000561990 VCAM1P19320 739 aa16.7■□□□□ 0.26
AC140658.4-201ENST00000561990 CUL4AQ13619 759 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms