RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 ENAHQ8N8S7 591 aaPredicted RBP8.77□□□□□ -1.01
TPM1-231ENST00000561395 OPTNQ96CV9 577 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 ZSCAN10Q96SZ4 725 aaPredicted RBP8.77□□□□□ -1.01
TPM1-231ENST00000561395 ZKSCAN3Q9BRR0 538 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 STXBP5LQ9Y2K9 1186 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 KIF3AQ9Y496 699 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 SLC12A7Q9Y666 1083 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 VCANP13611 3396 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 VPS37CA5D8V6 355 aaPredicted RBP8.76□□□□□ -1.01
TPM1-231ENST00000561395 GOLGA8AA7E2F4 631 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 GOLGA6L22H0YM25 854 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 F13A1P00488 732 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 GJA8P48165 433 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 PLCD1P51178 756 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 LACTBP83111 547 aaPredicted RBP8.76□□□□□ -1.01
TPM1-231ENST00000561395 KIF22Q14807 665 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 CDC42EP5Q6NZY7 148 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 C16orf86Q6ZW13 317 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 Q7L0L9 218 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 IQCA1Q86XH1 822 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 ZNF654Q8IZM8 581 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 FAM184AQ8NB25 1140 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 BRI3BPQ8WY22 251 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 RNF25Q96BH1 459 aaPredicted RBP8.76□□□□□ -1.01
TPM1-231ENST00000561395 DDX11Q96FC9 970 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 DYNLL2Q96FJ2 89 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 MS4A4AQ96JQ5 239 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 ELP3Q9H9T3 547 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 DDX4Q9NQI0 724 aaKnown RBP8.76□□□□□ -1.01
TPM1-231ENST00000561395 USP40Q9NVE5 1235 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 COL2A1P02458 1487 aaPredicted RBP8.76□□□□□ -1.01
TPM1-231ENST00000561395 MYH6P13533 1939 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 TCHHQ07283 1943 aa8.76□□□□□ -1.01
TPM1-231ENST00000561395 GREB1LQ9C091 1923 aaPredicted RBP8.76□□□□□ -1.01
TPM1-231ENST00000561395 EYSQ5T1H1 3165 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 CCL15-CCL14A0A0B4J2E2 113 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 TSPY2A6NKD2 308 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 CPLX1O14810 134 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 MYO1BO43795 1136 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 USP2O75604 605 aaPredicted RBP8.75□□□□□ -1.01
TPM1-231ENST00000561395 CDKL5O76039 1030 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 FARP2O94887 1054 aaPredicted RBP8.75□□□□□ -1.01
TPM1-231ENST00000561395 GNRH1P01148 92 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 FDPSP14324 419 aaKnown RBP8.75□□□□□ -1.01
TPM1-231ENST00000561395 RXRAP19793 462 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 CDC27P30260 824 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 PRMT2P55345 433 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 PICALMQ13492 652 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 DLGAP5Q15398 846 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 CCL15Q16663 113 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 SUPT20HL1Q3ZLR7 823 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 FAM47AQ5JRC9 791 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 IFIT1BQ5T764 474 aaKnown RBP8.75□□□□□ -1.01
TPM1-231ENST00000561395 NBPF12Q5TAG4 269 aaPredicted RBP8.75□□□□□ -1.01
TPM1-231ENST00000561395 MCTP1Q6DN14 999 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 GPR153Q6NV75 609 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 CPLX2Q6PUV4 134 aaKnown RBP8.75□□□□□ -1.01
TPM1-231ENST00000561395 SYNE3Q6ZMZ3 975 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 FAM43AQ8N2R8 423 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 SLC44A5Q8NCS7 719 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 MYL10Q9BUA6 226 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 OSBPL5Q9H0X9 879 aaPredicted RBP8.75□□□□□ -1.01
TPM1-231ENST00000561395 MKNK2Q9HBH9 465 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 ZNF287Q9HBT7 754 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 FAM217BQ9NTX9 383 aaPredicted RBP8.75□□□□□ -1.01
TPM1-231ENST00000561395 ATP6V1DQ9Y5K8 247 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 PTPRFP10586 1907 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 STK36Q9NRP7 1315 aa8.75□□□□□ -1.01
TPM1-231ENST00000561395 PLIN4Q96Q06 1357 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 CLRN2A0PK11 232 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 EVI5O60447 810 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 TLR2O60603 784 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 DDAH1O94760 285 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 GJB1P08034 283 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 CCL5P13501 91 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 RASA1P20936 1047 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 ADD1P35611 737 aaKnown RBP8.74□□□□□ -1.01
TPM1-231ENST00000561395 CDK8P49336 464 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 RBM5P52756 815 aaKnown RBP eCLIP8.74□□□□□ -1.01
TPM1-231ENST00000561395 TFAP4Q01664 338 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 GABPAQ06546 454 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 NTRK3Q16288 839 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 RTN1Q16799 776 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 CFAP100Q494V2 611 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 CCDC178Q5BJE1 867 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 CATIPQ7Z7H3 387 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 TTC6Q86TZ1 520 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.74□□□□□ -1.01
TPM1-231ENST00000561395 CCDC144CPQ8IYA2 1237 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 RGS22Q8NE09 1264 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 CHAMP1Q96JM3 812 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 IDI2Q9BXS1 227 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 VEZTQ9HBM0 779 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 TCP11L1Q9NUJ3 509 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 ORC3Q9UBD5 711 aaPredicted RBP8.74□□□□□ -1.01
TPM1-231ENST00000561395 PCDHAC2Q9Y5I4 1007 aa8.74□□□□□ -1.01
TPM1-231ENST00000561395 SPTBN5Q9NRC6 3674 aaKnown RBP8.74□□□□□ -1.01
TPM1-231ENST00000561395 CCDC196A0A1B0GTZ2 297 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 H3BQV1 296 aa8.73□□□□□ -1.01
TPM1-231ENST00000561395 NMT2O60551 498 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms