RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 TIGD5Q53EQ6 642 aa6.53□□□□□ -1.36
CASC4-211ENST00000561305 FBLN7Q53RD9 439 aa6.53□□□□□ -1.36
CASC4-211ENST00000561305 RNF111Q6ZNA4 994 aa6.53□□□□□ -1.36
CASC4-211ENST00000561305 ANKLE2Q86XL3 938 aa6.53□□□□□ -1.36
CASC4-211ENST00000561305 SYTL4Q96C24 671 aaPredicted RBP6.53□□□□□ -1.36
CASC4-211ENST00000561305 TOX2Q96NM4 488 aa6.53□□□□□ -1.36
CASC4-211ENST00000561305 CWC22Q9HCG8 908 aaKnown RBP6.53□□□□□ -1.36
CASC4-211ENST00000561305 NFIBO00712 420 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 TNFRSF10CO14798 259 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 POLR2BP30876 1174 aaKnown RBP6.52□□□□□ -1.37
CASC4-211ENST00000561305 ZNF165P49910 485 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 LRRFIP1Q32MZ4 808 aaKnown RBP6.52□□□□□ -1.37
CASC4-211ENST00000561305 GK5Q6ZS86 529 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 NLRC3Q7RTR2 1065 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 TMC3Q7Z5M5 1100 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 IRF2BP1Q8IU81 584 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 ZNF655Q8N720 491 aaPredicted RBP6.52□□□□□ -1.37
CASC4-211ENST00000561305 TMEM87AQ8NBN3 555 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 NKD1Q969G9 470 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 SHISA4Q96DD7 197 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 EAF1Q96JC9 268 aaPredicted RBP6.52□□□□□ -1.37
CASC4-211ENST00000561305 SLC6A17Q9H1V8 727 aa6.52□□□□□ -1.37
CASC4-211ENST00000561305 YBX2Q9Y2T7 364 aaKnown RBP6.52□□□□□ -1.37
CASC4-211ENST00000561305 NOTOA8MTQ0 251 aa6.51□□□□□ -1.37
CASC4-211ENST00000561305 TMEM253P0C7T8 217 aa6.51□□□□□ -1.37
CASC4-211ENST00000561305 NME1P15531 152 aaKnown RBP6.51□□□□□ -1.37
CASC4-211ENST00000561305 GLDCP23378 1020 aa6.51□□□□□ -1.37
CASC4-211ENST00000561305 SNW1Q13573 536 aaKnown RBP6.51□□□□□ -1.37
CASC4-211ENST00000561305 LINC00116Q8NCU8 138 aa6.51□□□□□ -1.37
CASC4-211ENST00000561305 TCTN2Q96GX1 697 aa6.51□□□□□ -1.37
CASC4-211ENST00000561305 SLC26A8Q96RN1 970 aa6.51□□□□□ -1.37
CASC4-211ENST00000561305 ANTXR1Q9H6X2 564 aa6.51□□□□□ -1.37
CASC4-211ENST00000561305 CD320Q9NPF0 282 aa6.51□□□□□ -1.37
CASC4-211ENST00000561305 CLEC3AO75596 197 aa6.5□□□□□ -1.37
CASC4-211ENST00000561305 MCM4P33991 863 aa6.5□□□□□ -1.37
CASC4-211ENST00000561305 TMEM192Q8IY95 271 aa6.5□□□□□ -1.37
CASC4-211ENST00000561305 LRRC56Q8IYG6 542 aaPredicted RBP6.5□□□□□ -1.37
CASC4-211ENST00000561305 INTS4Q96HW7 963 aaKnown RBP6.5□□□□□ -1.37
CASC4-211ENST00000561305 SPON2Q9BUD6 331 aa6.5□□□□□ -1.37
CASC4-211ENST00000561305 KRTAP17-1Q9BYP8 105 aa6.5□□□□□ -1.37
CASC4-211ENST00000561305 FOXP3Q9BZS1 431 aa6.5□□□□□ -1.37
CASC4-211ENST00000561305 PRDM14Q9GZV8 571 aa6.5□□□□□ -1.37
CASC4-211ENST00000561305 TMEM82A0PJX8 343 aa6.49□□□□□ -1.37
CASC4-211ENST00000561305 ETV2O00321 342 aaPredicted RBP6.49□□□□□ -1.37
CASC4-211ENST00000561305 SIGLEC6O43699 453 aa6.49□□□□□ -1.37
CASC4-211ENST00000561305 PSPNO60542 156 aa6.49□□□□□ -1.37
CASC4-211ENST00000561305 PCBP3P57721 371 aaKnown RBP6.49□□□□□ -1.37
CASC4-211ENST00000561305 TMCO4Q5TGY1 634 aa6.49□□□□□ -1.37
CASC4-211ENST00000561305 ATG14Q6ZNE5 492 aa6.49□□□□□ -1.37
CASC4-211ENST00000561305 SIAH1Q8IUQ4 282 aa6.49□□□□□ -1.37
CASC4-211ENST00000561305 KIAA0825Q8IV33 1275 aa6.49□□□□□ -1.37
CASC4-211ENST00000561305 ZSCAN18Q8TBC5 510 aaPredicted RBP6.49□□□□□ -1.37
CASC4-211ENST00000561305 TCFL5Q9UL49 500 aa6.49□□□□□ -1.37
CASC4-211ENST00000561305 PEX10O60683 326 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 PRAMEF1O95521 474 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 RPL10P27635 214 aaKnown RBP6.48□□□□□ -1.37
CASC4-211ENST00000561305 ZNF76P36508 570 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 KIR2DL1P43626 348 aaPredicted RBP6.48□□□□□ -1.37
CASC4-211ENST00000561305 KIR2DL2P43627 348 aaPredicted RBP6.48□□□□□ -1.37
CASC4-211ENST00000561305 BBS9Q3SYG4 887 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 INTS3Q68E01 1043 aaKnown RBP6.48□□□□□ -1.37
CASC4-211ENST00000561305 LCNL1Q6ZST4 164 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 WAPLQ7Z5K2 1190 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 NLRX1Q86UT6 975 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 KCNN1Q92952 543 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 MAP6Q96JE9 813 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 ZNF512BQ96KM6 892 aaPredicted RBP6.48□□□□□ -1.37
CASC4-211ENST00000561305 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 BACH2Q9BYV9 841 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 MCOLN1Q9GZU1 580 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 ZNF552Q9H707 407 aaPredicted RBP6.48□□□□□ -1.37
CASC4-211ENST00000561305 METTL5Q9NRN9 209 aaKnown RBP6.48□□□□□ -1.37
CASC4-211ENST00000561305 GPR160Q9UJ42 338 aa6.48□□□□□ -1.37
CASC4-211ENST00000561305 NPIPB6E9PJ23 425 aa6.47□□□□□ -1.37
CASC4-211ENST00000561305 NRDCO43847 1150 aa6.47□□□□□ -1.37
CASC4-211ENST00000561305 EFEMP2O95967 443 aa6.47□□□□□ -1.37
CASC4-211ENST00000561305 FANCCQ00597 558 aa6.47□□□□□ -1.37
CASC4-211ENST00000561305 KCNA10Q16322 511 aa6.47□□□□□ -1.37
CASC4-211ENST00000561305 SLC6A18Q96N87 628 aa6.47□□□□□ -1.37
CASC4-211ENST00000561305 SLC9A7Q96T83 725 aa6.47□□□□□ -1.37
CASC4-211ENST00000561305 PRR13Q9NZ81 148 aa6.47□□□□□ -1.37
CASC4-211ENST00000561305 ZMYM5Q9UJ78 669 aa6.47□□□□□ -1.37
CASC4-211ENST00000561305 ZNRF3Q9ULT6 936 aa6.47□□□□□ -1.37
CASC4-211ENST00000561305 SMG5Q9UPR3 1016 aaKnown RBP6.47□□□□□ -1.37
CASC4-211ENST00000561305 MYOCOSA0A1B0GUC4 107 aa6.46□□□□□ -1.38
CASC4-211ENST00000561305 SSU72P8A0A1W2PR75 194 aa6.46□□□□□ -1.38
CASC4-211ENST00000561305 TCAF2A6NFQ2 919 aa6.46□□□□□ -1.38
CASC4-211ENST00000561305 SYPP08247 313 aa6.46□□□□□ -1.38
CASC4-211ENST00000561305 LCE4AQ5TA78 99 aa6.46□□□□□ -1.38
CASC4-211ENST00000561305 USP48Q86UV5 1035 aa6.46□□□□□ -1.38
CASC4-211ENST00000561305 AMIGO3Q86WK7 504 aa6.46□□□□□ -1.38
CASC4-211ENST00000561305 HHIPL1Q96JK4 782 aa6.46□□□□□ -1.38
CASC4-211ENST00000561305 CHST7Q9NS84 486 aa6.46□□□□□ -1.38
CASC4-211ENST00000561305 MINPP1Q9UNW1 487 aa6.46□□□□□ -1.38
CASC4-211ENST00000561305 SEMA7AO75326 666 aa6.45□□□□□ -1.38
CASC4-211ENST00000561305 USP2O75604 605 aaPredicted RBP6.45□□□□□ -1.38
CASC4-211ENST00000561305 ACRP10323 421 aa6.45□□□□□ -1.38
CASC4-211ENST00000561305 IMPDH2P12268 514 aa6.45□□□□□ -1.38
CASC4-211ENST00000561305 AUHQ13825 339 aaKnown RBP6.45□□□□□ -1.38
CASC4-211ENST00000561305 ZPBP2Q6X784 338 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms