RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CCDC69A6NI79 296 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 USP17L15C9J2P7 530 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 USP17L13C9JLJ4 530 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 USP17L11C9JVI0 530 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 USP17L18D6R9N7 530 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 USP17L22D6RA61 530 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 USP17L17D6RBQ6 530 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 USP17L19D6RCP7 530 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 USP17L20D6RJB6 530 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-221ENST00000561276 WDR46O15213 610 aaKnown RBP12.04□□□□□ -0.48
LRRC28-221ENST00000561276 NDUFB10O96000 172 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 VCAM1P19320 739 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 HOXA7P31268 230 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-221ENST00000561276 NEK4P51957 841 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 USP17L24Q0WX57 530 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 NFXL1Q6ZNB6 911 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 CATSPERGQ6ZRH7 1159 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 TBC1D32Q96NH3 1257 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 NUP88Q99567 741 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-221ENST00000561276 RPAP3Q9H6T3 665 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-221ENST00000561276 PDRG1Q9NUG6 133 aa12.04□□□□□ -0.48
LRRC28-221ENST00000561276 RLFQ13129 1914 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 COL11A1P12107 1806 aaPredicted RBP12.03□□□□□ -0.48
LRRC28-221ENST00000561276 PDHBP11177 359 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 BMP3P12645 472 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 SLC1A4P43007 532 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
LRRC28-221ENST00000561276 FAM83BQ5T0W9 1011 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 SGMS1Q86VZ5 419 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 FBXL16Q8N461 479 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 BRF1Q92994 677 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 AGXT2Q9BYV1 514 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 TANGO6Q9C0B7 1094 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 ALDH8A1Q9H2A2 487 aaPredicted RBP12.03□□□□□ -0.48
LRRC28-221ENST00000561276 SLC45A1Q9Y2W3 748 aa12.03□□□□□ -0.48
LRRC28-221ENST00000561276 TMEM232C9JQI7 657 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 TRPA1O75762 1119 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 ALDH1A1P00352 501 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 OSBPP22059 807 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 MAP2K1Q02750 393 aaPredicted RBP12.02□□□□□ -0.49
LRRC28-221ENST00000561276 APOBRQ0VD83 1088 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 TROAPQ12815 778 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 TOB2Q14106 344 aaPredicted RBP12.02□□□□□ -0.49
LRRC28-221ENST00000561276 COG2Q14746 738 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 SYNE3Q6ZMZ3 975 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 KCTD1Q719H9 257 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 RASGRP2Q7LDG7 609 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 CATIPQ7Z7H3 387 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 ZNF654Q8IZM8 581 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 DCAF4Q8WV16 495 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 P2RX7Q99572 595 aaKnown RBP12.02□□□□□ -0.49
LRRC28-221ENST00000561276 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
LRRC28-221ENST00000561276 MYL10Q9BUA6 226 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 ASCC2Q9H1I8 757 aaPredicted RBP12.02□□□□□ -0.49
LRRC28-221ENST00000561276 ZCCHC17Q9NP64 241 aaKnown RBP12.02□□□□□ -0.49
LRRC28-221ENST00000561276 GPCPD1Q9NPB8 672 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 RNF186Q9NXI6 227 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 BRPF3Q9ULD4 1205 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 SLC12A7Q9Y666 1083 aa12.02□□□□□ -0.49
LRRC28-221ENST00000561276 KLF18A0A0U1RQI7 1052 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 FLOT1O75955 427 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 PARP1P09874 1014 aaKnown RBP12.01□□□□□ -0.49
LRRC28-221ENST00000561276 GOLGA8HP0CJ92 632 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 SNHG28P0DPA3 235 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 CYP2C8P10632 490 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 IRX3P78415 501 aaPredicted RBP12.01□□□□□ -0.49
LRRC28-221ENST00000561276 ZNF543Q08ER8 600 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 TAF1CQ15572 869 aaPredicted RBP12.01□□□□□ -0.49
LRRC28-221ENST00000561276 CCDC96Q2M329 555 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 JMYQ8N9B5 988 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 PRPF38AQ8NAV1 312 aaKnown RBP12.01□□□□□ -0.49
LRRC28-221ENST00000561276 CHURC1Q8WUH1 139 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 NUP133Q8WUM0 1156 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 BEGAINQ9BUH8 593 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 FBXO28Q9NVF7 368 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 HOXC10Q9NYD6 342 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 PNMA3Q9UL41 463 aa12.01□□□□□ -0.49
LRRC28-221ENST00000561276 ISY1Q9ULR0 285 aaKnown RBP12.01□□□□□ -0.49
LRRC28-221ENST00000561276 FRMPD2Q68DX3 1309 aaPredicted RBP12.01□□□□□ -0.49
LRRC28-221ENST00000561276 CA12O43570 354 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 TBC1D8O95759 1140 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 CALM1P0DP23 149 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 CALM2P0DP24 149 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 CALM3P0DP25 149 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 AK2P54819 239 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 EVCP57679 992 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 GPATCH4Q5T3I0 446 aaKnown RBP12□□□□□ -0.49
LRRC28-221ENST00000561276 TTBK2Q6IQ55 1244 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 APOA5Q6Q788 366 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 STAG2Q8N3U4 1231 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 FANCBQ8NB91 859 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 MAP3K14Q99558 947 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 ZFYVE28Q9HCC9 887 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 WBP1LQ9NX94 342 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 MAD2L2Q9UI95 211 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 FEM1BQ9UK73 627 aa12□□□□□ -0.49
LRRC28-221ENST00000561276 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
LRRC28-221ENST00000561276 MYH6P13533 1939 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms