RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 NUDT12Q9BQG2 462 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 SPATC1LQ9H0A9 340 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 IL17RBQ9NRM6 502 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 HELLSQ9NRZ9 838 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 MTMR4Q9NYA4 1195 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 PCDH10Q9P2E7 1040 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 CLIP2Q9UDT6 1046 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 CCDC171Q6TFL3 1326 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 FGAP02671 866 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 HSPD1P10809 573 aaKnown RBP15.08■□□□□ 0
CHRNA3-208ENST00000561128 ERCC3P19447 782 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 PTPREP23469 700 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 CCND3P30281 292 aaPredicted RBP15.08■□□□□ 0
CHRNA3-208ENST00000561128 MNX1P50219 401 aaPredicted RBP15.08■□□□□ 0
CHRNA3-208ENST00000561128 HAND2P61296 217 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 TFAP4Q01664 338 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 MAP2K5Q13163 448 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 GRB14Q14449 540 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 MCMDC2Q4G0Z9 681 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 NEDD1Q8NHV4 660 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 NACAP1Q9BZK3 213 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 SH2D4AQ9H788 454 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 ADAMTS5Q9UNA0 930 aa15.08■□□□□ 0
CHRNA3-208ENST00000561128 F5H6K3 240 aa15.07■□□□□ 0
CHRNA3-208ENST00000561128 IGHA2P01877 340 aa15.07■□□□□ 0
CHRNA3-208ENST00000561128 PRKAR2AP13861 404 aaKnown RBP15.07■□□□□ 0
CHRNA3-208ENST00000561128 KLRC3Q07444 240 aa15.07■□□□□ 0
CHRNA3-208ENST00000561128 CACNB2Q08289 660 aaPredicted RBP15.07■□□□□ 0
CHRNA3-208ENST00000561128 ALX1Q15699 326 aa15.07■□□□□ 0
CHRNA3-208ENST00000561128 CRISPLD2Q9H0B8 497 aa15.07■□□□□ 0
CHRNA3-208ENST00000561128 ANAPC4Q9UJX5 808 aa15.07■□□□□ 0
CHRNA3-208ENST00000561128 ZNF214Q9UL59 606 aaPredicted RBP15.07■□□□□ 0
CHRNA3-208ENST00000561128 PPP1R9AQ9ULJ8 1098 aa15.07■□□□□ 0
CHRNA3-208ENST00000561128 SLC15A5A6NIM6 579 aa15.06■□□□□ 0
CHRNA3-208ENST00000561128 VWA5AO00534 786 aa15.06■□□□□ 0
CHRNA3-208ENST00000561128 COBLO75128 1261 aa15.06■□□□□ 0
CHRNA3-208ENST00000561128 SGPL1O95470 568 aa15.06■□□□□ 0
CHRNA3-208ENST00000561128 XRCC5P13010 732 aaKnown RBP15.06■□□□□ 0
CHRNA3-208ENST00000561128 ZKSCAN1P17029 563 aaPredicted RBP15.06■□□□□ 0
CHRNA3-208ENST00000561128 TAL1P17542 331 aaPredicted RBP15.06■□□□□ 0
CHRNA3-208ENST00000561128 RGS2P41220 211 aa15.06■□□□□ 0
CHRNA3-208ENST00000561128 PLS1Q14651 629 aa15.06■□□□□ 0
CHRNA3-208ENST00000561128 PRPF38BQ5VTL8 546 aaKnown RBP15.06■□□□□ 0
CHRNA3-208ENST00000561128 ZNF444Q8N0Y2 327 aaPredicted RBP15.06■□□□□ 0
CHRNA3-208ENST00000561128 TRPV1Q8NER1 839 aa15.06■□□□□ 0
CHRNA3-208ENST00000561128 GOPCQ9HD26 462 aa15.06■□□□□ 0
CHRNA3-208ENST00000561128 NEDD4P46934 1319 aa15.06■□□□□ 0
CHRNA3-208ENST00000561128 FARP2O94887 1054 aaPredicted RBP15.05■□□□□ -0
CHRNA3-208ENST00000561128 FGRP09769 529 aa15.05■□□□□ -0
CHRNA3-208ENST00000561128 TSPY3P0CV98 308 aa15.05■□□□□ -0
CHRNA3-208ENST00000561128 TSPY8P0CW00 308 aa15.05■□□□□ -0
CHRNA3-208ENST00000561128 ADORA2AP29274 412 aa15.05■□□□□ -0
CHRNA3-208ENST00000561128 TTC22Q5TAA0 569 aa15.05■□□□□ -0
CHRNA3-208ENST00000561128 CWC27Q6UX04 472 aaKnown RBP15.05■□□□□ -0
CHRNA3-208ENST00000561128 RIPK3Q9Y572 518 aa15.05■□□□□ -0
CHRNA3-208ENST00000561128 ZMYM6O95789 1325 aa15.05■□□□□ -0
CHRNA3-208ENST00000561128 ORC4O43929 436 aa15.04■□□□□ -0
CHRNA3-208ENST00000561128 TTLL1O95922 423 aa15.04■□□□□ -0
CHRNA3-208ENST00000561128 HOXC6P09630 235 aa15.04■□□□□ -0
CHRNA3-208ENST00000561128 CYP2C19P33261 490 aa15.04■□□□□ -0
CHRNA3-208ENST00000561128 CCNA1P78396 465 aa15.04■□□□□ -0
CHRNA3-208ENST00000561128 PDE4BQ07343 736 aa15.04■□□□□ -0
CHRNA3-208ENST00000561128 NCAPG2Q86XI2 1143 aa15.04■□□□□ -0
CHRNA3-208ENST00000561128 CCAR1Q8IX12 1150 aaKnown RBP15.04■□□□□ -0
CHRNA3-208ENST00000561128 SHCBP1Q8NEM2 672 aa15.04■□□□□ -0
CHRNA3-208ENST00000561128 MKL1Q969V6 931 aa15.04■□□□□ -0
CHRNA3-208ENST00000561128 HOXC10Q9NYD6 342 aa15.04■□□□□ -0
CHRNA3-208ENST00000561128 PLXNA1Q9UIW2 1896 aa15.03■□□□□ -0
CHRNA3-208ENST00000561128 RPTORQ8N122 1335 aa15.03■□□□□ -0
CHRNA3-208ENST00000561128 NOVP48745 357 aa15.03■□□□□ -0
CHRNA3-208ENST00000561128 SNAP25P60880 206 aa15.03■□□□□ -0
CHRNA3-208ENST00000561128 RRP12Q5JTH9 1297 aaKnown RBP15.03■□□□□ -0
CHRNA3-208ENST00000561128 SLFN13Q68D06 897 aa15.03■□□□□ -0
CHRNA3-208ENST00000561128 MB21D1Q8N884 522 aa15.03■□□□□ -0
CHRNA3-208ENST00000561128 GMCL1P1Q8NEA9 526 aa15.03■□□□□ -0
CHRNA3-208ENST00000561128 SLF1Q9BQI6 1058 aa15.03■□□□□ -0
CHRNA3-208ENST00000561128 CWC22Q9HCG8 908 aaKnown RBP15.03■□□□□ -0
CHRNA3-208ENST00000561128 LCTP09848 1927 aa15.02■□□□□ -0
CHRNA3-208ENST00000561128 TSPY2A6NKD2 308 aa15.02■□□□□ -0
CHRNA3-208ENST00000561128 RANBP6O60518 1105 aaKnown RBP15.02■□□□□ -0
CHRNA3-208ENST00000561128 PGK2P07205 417 aa15.02■□□□□ -0
CHRNA3-208ENST00000561128 LHX8Q68G74 356 aa15.02■□□□□ -0
CHRNA3-208ENST00000561128 RIOX2Q8IUF8 465 aa15.02■□□□□ -0
CHRNA3-208ENST00000561128 KIFC2Q96AC6 838 aa15.02■□□□□ -0
CHRNA3-208ENST00000561128 HMX1Q9NP08 348 aaPredicted RBP15.02■□□□□ -0
CHRNA3-208ENST00000561128 DIAPH3Q9NSV4 1193 aa15.02■□□□□ -0
CHRNA3-208ENST00000561128 MTMR7Q9Y216 660 aa15.02■□□□□ -0
CHRNA3-208ENST00000561128 TAF6LQ9Y6J9 622 aa15.02■□□□□ -0
CHRNA3-208ENST00000561128 LRRC37A2A6NM11 1700 aa15.02□□□□□ -0.01
CHRNA3-208ENST00000561128 PFASO15067 1338 aa15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 TFRCP02786 760 aaKnown RBP15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 CYBAP13498 195 aa15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 RCSD1Q6JBY9 416 aa15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 KCTD1Q719H9 257 aa15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 PAWRQ96IZ0 340 aaKnown RBP15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 FGD4Q96M96 766 aa15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 ZNF287Q9HBT7 754 aa15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 RAVER2Q9HCJ3 691 aaKnown RBP15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 STX8Q9UNK0 236 aa15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 IVNS1ABPQ9Y6Y0 642 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms