RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 A0A1W2PQY0 241 aa22.43■■□□□ 1.18
TPM1-226ENST00000560959 PDE6AP16499 860 aa22.43■■□□□ 1.18
TPM1-226ENST00000560959 COPB2P35606 906 aa22.43■■□□□ 1.18
TPM1-226ENST00000560959 ZNF792Q3KQV3 632 aa22.43■■□□□ 1.18
TPM1-226ENST00000560959 TJAP1Q5JTD0 557 aa22.43■■□□□ 1.18
TPM1-226ENST00000560959 MMP19Q99542 508 aa22.43■■□□□ 1.18
TPM1-226ENST00000560959 TMEM39AQ9NV64 488 aa22.43■■□□□ 1.18
TPM1-226ENST00000560959 ZNF865P0CJ78 1059 aaPredicted RBP22.42■■□□□ 1.18
TPM1-226ENST00000560959 AKR1A1P14550 325 aa22.42■■□□□ 1.18
TPM1-226ENST00000560959 ICA1Q05084 483 aa22.42■■□□□ 1.18
TPM1-226ENST00000560959 AACSQ86V21 672 aa22.42■■□□□ 1.18
TPM1-226ENST00000560959 MSL3Q8N5Y2 521 aaKnown RBP22.42■■□□□ 1.18
TPM1-226ENST00000560959 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.42■■□□□ 1.18
TPM1-226ENST00000560959 C1orf115Q9H7X2 142 aa22.42■■□□□ 1.18
TPM1-226ENST00000560959 TTC28Q96AY4 2481 aa22.41■■□□□ 1.18
TPM1-226ENST00000560959 DCDC2CA8MYV0 355 aa22.41■■□□□ 1.18
TPM1-226ENST00000560959 PGK1P00558 417 aa22.41■■□□□ 1.18
TPM1-226ENST00000560959 DNAJB2P25686 324 aa22.41■■□□□ 1.18
TPM1-226ENST00000560959 EVX2Q03828 476 aa22.41■■□□□ 1.18
TPM1-226ENST00000560959 FAAP100Q0VG06 881 aa22.41■■□□□ 1.18
TPM1-226ENST00000560959 KCTD2Q14681 263 aa22.41■■□□□ 1.18
TPM1-226ENST00000560959 GRIN2CQ14957 1233 aa22.41■■□□□ 1.18
TPM1-226ENST00000560959 SPICE1Q8N0Z3 855 aa22.41■■□□□ 1.18
TPM1-226ENST00000560959 NUP133Q8WUM0 1156 aa22.41■■□□□ 1.18
TPM1-226ENST00000560959 ZNF532Q9HCE3 1301 aa22.4■■□□□ 1.18
TPM1-226ENST00000560959 TCRBV5S4A2TA0A5A2 114 aa22.4■■□□□ 1.18
TPM1-226ENST00000560959 PQBP1O60828 265 aaKnown RBP22.4■■□□□ 1.18
TPM1-226ENST00000560959 ADAMTS4O75173 837 aa22.4■■□□□ 1.18
TPM1-226ENST00000560959 STAT3P40763 770 aa22.4■■□□□ 1.18
TPM1-226ENST00000560959 HSP90AB4PQ58FF6 505 aa22.4■■□□□ 1.18
TPM1-226ENST00000560959 SLC44A5Q8NCS7 719 aa22.4■■□□□ 1.18
TPM1-226ENST00000560959 SDR42E1Q8WUS8 393 aa22.4■■□□□ 1.18
TPM1-226ENST00000560959 ZNF576Q9H609 170 aa22.4■■□□□ 1.18
TPM1-226ENST00000560959 ATP8A2Q9NTI2 1148 aa22.4■■□□□ 1.18
TPM1-226ENST00000560959 MOXD2PA6NHM9 499 aa22.39■■□□□ 1.17
TPM1-226ENST00000560959 TIMP1P01033 207 aa22.39■■□□□ 1.17
TPM1-226ENST00000560959 PGK2P07205 417 aa22.39■■□□□ 1.17
TPM1-226ENST00000560959 AKR1B1P15121 316 aa22.39■■□□□ 1.17
TPM1-226ENST00000560959 CNPY2Q9Y2B0 182 aa22.39■■□□□ 1.17
TPM1-226ENST00000560959 VWA5AO00534 786 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 CYP2D6P10635 497 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 TAL1P17542 331 aaPredicted RBP22.38■■□□□ 1.17
TPM1-226ENST00000560959 ACLYP53396 1101 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 CEP85Q6P2H3 762 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 FTSJ3Q8IY81 847 aaKnown RBP22.38■■□□□ 1.17
TPM1-226ENST00000560959 LCORLQ8N3X6 602 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 KLHDC9Q8NEP7 349 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 DYNLL2Q96FJ2 89 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 KANSL2Q9H9L4 492 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 STARD7Q9NQZ5 370 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 PPP1R9AQ9ULJ8 1098 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 SMCHD1A6NHR9 2005 aa22.38■■□□□ 1.17
TPM1-226ENST00000560959 TNFRSF10AO00220 468 aa22.37■■□□□ 1.17
TPM1-226ENST00000560959 CCSAPQ6IQ19 270 aaPredicted RBP22.37■■□□□ 1.17
TPM1-226ENST00000560959 CCDC174Q6PII3 467 aa22.37■■□□□ 1.17
TPM1-226ENST00000560959 TIFAQ96CG3 184 aa22.37■■□□□ 1.17
TPM1-226ENST00000560959 ZNF214Q9UL59 606 aaPredicted RBP22.37■■□□□ 1.17
TPM1-226ENST00000560959 FAM184BQ9ULE4 1060 aa22.37■■□□□ 1.17
TPM1-226ENST00000560959 ELP1O95163 1332 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 MROH7Q68CQ1 1323 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 SYNGAP1Q96PV0 1343 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 CCER2I3L3R5 266 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 CDK8P49336 464 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 C12orf60Q5U649 245 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 MFSD5Q6N075 450 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 MAMDC4Q6UXC1 1216 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 ITPRIPQ8IWB1 547 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 REPS2Q8NFH8 660 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 GOPCQ9HD26 462 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 TBX21Q9UL17 535 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 EXOC6BQ9Y2D4 811 aa22.36■■□□□ 1.17
TPM1-226ENST00000560959 NAV1Q8NEY1 1877 aa22.35■■□□□ 1.17
TPM1-226ENST00000560959 EEF2P13639 858 aaKnown RBP22.35■■□□□ 1.17
TPM1-226ENST00000560959 CST5P28325 142 aaPredicted RBP22.35■■□□□ 1.17
TPM1-226ENST00000560959 AKNAD1Q5T1N1 836 aa22.35■■□□□ 1.17
TPM1-226ENST00000560959 C16orf86Q6ZW13 317 aa22.35■■□□□ 1.17
TPM1-226ENST00000560959 CLEC10AQ8IUN9 316 aa22.35■■□□□ 1.17
TPM1-226ENST00000560959 AMOTL1Q8IY63 956 aa22.35■■□□□ 1.17
TPM1-226ENST00000560959 USP38Q8NB14 1042 aa22.35■■□□□ 1.17
TPM1-226ENST00000560959 RHPN1Q8TCX5 695 aa22.35■■□□□ 1.17
TPM1-226ENST00000560959 ATXN2LQ8WWM7 1075 aaKnown RBP22.35■■□□□ 1.17
TPM1-226ENST00000560959 FBXO28Q9NVF7 368 aa22.35■■□□□ 1.17
TPM1-226ENST00000560959 ZNFX1Q9P2E3 1918 aaKnown RBP22.35■■□□□ 1.17
TPM1-226ENST00000560959 GOLIM4O00461 696 aa22.34■■□□□ 1.17
TPM1-226ENST00000560959 DUSP11O75319 330 aaKnown RBP22.34■■□□□ 1.17
TPM1-226ENST00000560959 CDK7P50613 346 aa22.34■■□□□ 1.17
TPM1-226ENST00000560959 PPIGQ13427 754 aaKnown RBP eCLIP22.34■■□□□ 1.172e-10■■□□□ 11.9
TPM1-226ENST00000560959 KCNA10Q16322 511 aa22.34■■□□□ 1.17
TPM1-226ENST00000560959 RASIP1Q5U651 963 aa22.34■■□□□ 1.17
TPM1-226ENST00000560959 SAMD1Q6SPF0 538 aaPredicted RBP22.34■■□□□ 1.17
TPM1-226ENST00000560959 CLASRPQ8N2M8 674 aaKnown RBP22.34■■□□□ 1.17
TPM1-226ENST00000560959 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.34■■□□□ 1.171e-6■□□□□ 10.6
TPM1-226ENST00000560959 ARMT1Q9H993 441 aa22.34■■□□□ 1.17
TPM1-226ENST00000560959 SYNRGQ9UMZ2 1314 aa22.33■■□□□ 1.17
TPM1-226ENST00000560959 SNAI1O95863 264 aaPredicted RBP22.33■■□□□ 1.17
TPM1-226ENST00000560959 ZNF467Q7Z7K2 595 aaPredicted RBP22.33■■□□□ 1.17
TPM1-226ENST00000560959 PCSK9Q8NBP7 692 aaKnown RBP22.33■■□□□ 1.17
TPM1-226ENST00000560959 GLT1D1Q96MS3 346 aa22.33■■□□□ 1.17
TPM1-226ENST00000560959 GAS2L1Q99501 681 aaPredicted RBP22.33■■□□□ 1.17
TPM1-226ENST00000560959 DNAJC25-GNG10A0A024R161 153 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms