RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 CAPN2P17655 700 aa23.77■■□□□ 1.4
IPO4-215ENST00000560935 TFAP4Q01664 338 aa23.77■■□□□ 1.4
IPO4-215ENST00000560935 KLRC3Q07444 240 aa23.77■■□□□ 1.4
IPO4-215ENST00000560935 PLS1Q14651 629 aa23.77■■□□□ 1.4
IPO4-215ENST00000560935 FAM47AQ5JRC9 791 aa23.77■■□□□ 1.4
IPO4-215ENST00000560935 PRPF38BQ5VTL8 546 aaKnown RBP23.77■■□□□ 1.4
IPO4-215ENST00000560935 SHCBP1Q8NEM2 672 aa23.77■■□□□ 1.4
IPO4-215ENST00000560935 DEFB118Q96PH6 123 aa23.77■■□□□ 1.4
IPO4-215ENST00000560935 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.77■■□□□ 1.43e-6■■■■■ 29.1
IPO4-215ENST00000560935 PAK6Q9NQU5 681 aaPredicted RBP23.77■■□□□ 1.4
IPO4-215ENST00000560935 ANAPC4Q9UJX5 808 aa23.77■■□□□ 1.4
IPO4-215ENST00000560935 SYNPO2Q9UMS6 1093 aa23.77■■□□□ 1.4
IPO4-215ENST00000560935 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.77■■□□□ 1.4
IPO4-215ENST00000560935 HIP1O00291 1037 aa23.76■■□□□ 1.39
IPO4-215ENST00000560935 NDUFB10O96000 172 aa23.76■■□□□ 1.39
IPO4-215ENST00000560935 HSPD1P10809 573 aaKnown RBP23.76■■□□□ 1.39
IPO4-215ENST00000560935 PPP4R3BQ5MIZ7 849 aa23.76■■□□□ 1.39
IPO4-215ENST00000560935 ZNF589Q86UQ0 364 aaPredicted RBP23.76■■□□□ 1.39
IPO4-215ENST00000560935 MKL1Q969V6 931 aa23.76■■□□□ 1.39
IPO4-215ENST00000560935 HMX1Q9NP08 348 aaPredicted RBP23.76■■□□□ 1.39
IPO4-215ENST00000560935 DIAPH3Q9NSV4 1193 aa23.76■■□□□ 1.39
IPO4-215ENST00000560935 FBXO28Q9NVF7 368 aa23.76■■□□□ 1.39
IPO4-215ENST00000560935 PPP1R9AQ9ULJ8 1098 aa23.76■■□□□ 1.39
IPO4-215ENST00000560935 ZMYM6O95789 1325 aa23.76■■□□□ 1.39
IPO4-215ENST00000560935 RPTORQ8N122 1335 aa23.76■■□□□ 1.39
IPO4-215ENST00000560935 COL11A1P12107 1806 aaPredicted RBP23.75■■□□□ 1.39
IPO4-215ENST00000560935 TSPY2A6NKD2 308 aa23.75■■□□□ 1.39
IPO4-215ENST00000560935 FGAP02671 866 aa23.75■■□□□ 1.39
IPO4-215ENST00000560935 ERCC3P19447 782 aa23.75■■□□□ 1.39
IPO4-215ENST00000560935 TRIM32Q13049 653 aa23.75■■□□□ 1.39
IPO4-215ENST00000560935 GRB14Q14449 540 aa23.75■■□□□ 1.39
IPO4-215ENST00000560935 ZNF236Q9UL36 1845 aa23.75■■□□□ 1.39
IPO4-215ENST00000560935 STRNO43815 780 aa23.74■■□□□ 1.39
IPO4-215ENST00000560935 LRRC47Q8N1G4 583 aaKnown RBP23.74■■□□□ 1.39
IPO4-215ENST00000560935 NUP88Q99567 741 aaPredicted RBP23.74■■□□□ 1.39
IPO4-215ENST00000560935 SLF1Q9BQI6 1058 aa23.74■■□□□ 1.39
IPO4-215ENST00000560935 MROH8Q9H579 483 aa23.74■■□□□ 1.39
IPO4-215ENST00000560935 ADAMTS5Q9UNA0 930 aa23.74■■□□□ 1.39
IPO4-215ENST00000560935 TFRCP02786 760 aaKnown RBP23.73■■□□□ 1.39
IPO4-215ENST00000560935 PRKAR2AP13861 404 aaKnown RBP23.73■■□□□ 1.39
IPO4-215ENST00000560935 TMEM132BQ14DG7 1078 aa23.73■■□□□ 1.39
IPO4-215ENST00000560935 CCL14Q16627 93 aa23.73■■□□□ 1.39
IPO4-215ENST00000560935 NCAPG2Q86XI2 1143 aa23.73■■□□□ 1.39
IPO4-215ENST00000560935 GMCL1P1Q8NEA9 526 aa23.73■■□□□ 1.39
IPO4-215ENST00000560935 VWA5AO00534 786 aa23.72■■□□□ 1.39
IPO4-215ENST00000560935 ORC4O43929 436 aa23.72■■□□□ 1.39
IPO4-215ENST00000560935 RANBP6O60518 1105 aaKnown RBP23.72■■□□□ 1.39
IPO4-215ENST00000560935 FARP2O94887 1054 aaPredicted RBP23.72■■□□□ 1.39
IPO4-215ENST00000560935 SLC25A27O95847 323 aa23.72■■□□□ 1.39
IPO4-215ENST00000560935 HOXC6P09630 235 aa23.72■■□□□ 1.39
IPO4-215ENST00000560935 PDE4AP27815 886 aa23.72■■□□□ 1.39
IPO4-215ENST00000560935 MAP3K21Q5TCX8 1036 aa23.72■■□□□ 1.39
IPO4-215ENST00000560935 CWC27Q6UX04 472 aaKnown RBP23.72■■□□□ 1.39
IPO4-215ENST00000560935 TOMM22Q9NS69 142 aa23.72■■□□□ 1.39
IPO4-215ENST00000560935 MFSD14CQ5VZR4 134 aa23.71■■□□□ 1.39
IPO4-215ENST00000560935 DPP9Q86TI2 863 aa23.71■■□□□ 1.39
IPO4-215ENST00000560935 CRISPLD2Q9H0B8 497 aa23.71■■□□□ 1.39
IPO4-215ENST00000560935 INCENPQ9NQS7 918 aa23.71■■□□□ 1.39
IPO4-215ENST00000560935 STX8Q9UNK0 236 aa23.71■■□□□ 1.39
IPO4-215ENST00000560935 FGRP09769 529 aa23.7■■□□□ 1.38
IPO4-215ENST00000560935 ADORA2AP29274 412 aa23.7■■□□□ 1.38
IPO4-215ENST00000560935 COPB2P35606 906 aa23.7■■□□□ 1.38
IPO4-215ENST00000560935 CACNB2Q08289 660 aaPredicted RBP23.7■■□□□ 1.38
IPO4-215ENST00000560935 TTC22Q5TAA0 569 aa23.7■■□□□ 1.38
IPO4-215ENST00000560935 SLFN13Q68D06 897 aa23.7■■□□□ 1.38
IPO4-215ENST00000560935 RIOX2Q8IUF8 465 aa23.7■■□□□ 1.38
IPO4-215ENST00000560935 ABRAQ8N0Z2 381 aa23.7■■□□□ 1.38
IPO4-215ENST00000560935 PRPF38AQ8NAV1 312 aaKnown RBP23.7■■□□□ 1.38
IPO4-215ENST00000560935 SLC5A4Q9NY91 659 aa23.7■■□□□ 1.38
IPO4-215ENST00000560935 BMP3P12645 472 aa23.69■■□□□ 1.38
IPO4-215ENST00000560935 STAT3P40763 770 aa23.69■■□□□ 1.38
IPO4-215ENST00000560935 HAND2P61296 217 aa23.69■■□□□ 1.38
IPO4-215ENST00000560935 RRP12Q5JTH9 1297 aaKnown RBP23.69■■□□□ 1.38
IPO4-215ENST00000560935 UBE2Q1Q7Z7E8 422 aa23.69■■□□□ 1.38
IPO4-215ENST00000560935 NPLOC4Q8TAT6 608 aa23.69■■□□□ 1.38
IPO4-215ENST00000560935 FEM1BQ9UK73 627 aa23.69■■□□□ 1.38
IPO4-215ENST00000560935 ZNF214Q9UL59 606 aaPredicted RBP23.69■■□□□ 1.38
IPO4-215ENST00000560935 CTDP1Q9Y5B0 961 aaPredicted RBP23.69■■□□□ 1.38
IPO4-215ENST00000560935 TACC3Q9Y6A5 838 aa23.69■■□□□ 1.38
IPO4-215ENST00000560935 MKI67P46013 3256 aaKnown RBP23.69■■□□□ 1.38
IPO4-215ENST00000560935 FCER1AP12319 257 aa23.68■■□□□ 1.38
IPO4-215ENST00000560935 REPS2Q8NFH8 660 aa23.68■■□□□ 1.38
IPO4-215ENST00000560935 HTATIP2Q9BUP3 242 aa23.68■■□□□ 1.38
IPO4-215ENST00000560935 IL17RBQ9NRM6 502 aa23.68■■□□□ 1.38
IPO4-215ENST00000560935 FLRT1Q9NZU1 646 aa23.68■■□□□ 1.38
IPO4-215ENST00000560935 ISY1Q9ULR0 285 aaKnown RBP23.68■■□□□ 1.38
IPO4-215ENST00000560935 ZBED4O75132 1171 aa23.67■■□□□ 1.38
IPO4-215ENST00000560935 PCP11498 1178 aaKnown RBP23.67■■□□□ 1.38
IPO4-215ENST00000560935 ANKLE1Q8NAG6 615 aa23.67■■□□□ 1.38
IPO4-215ENST00000560935 KIFC2Q96AC6 838 aa23.67■■□□□ 1.38
IPO4-215ENST00000560935 TEX13BQ9BXU2 312 aa23.67■■□□□ 1.38
IPO4-215ENST00000560935 LAMA4Q16363 1823 aa23.67■■□□□ 1.38
IPO4-215ENST00000560935 NMT2O60551 498 aa23.66■■□□□ 1.38
IPO4-215ENST00000560935 GSPT1P15170 499 aaKnown RBP23.66■■□□□ 1.38
IPO4-215ENST00000560935 AKNAD1Q5T1N1 836 aa23.66■■□□□ 1.38
IPO4-215ENST00000560935 MFSD6Q6ZSS7 791 aa23.66■■□□□ 1.38
IPO4-215ENST00000560935 GMCL1Q96IK5 515 aa23.66■■□□□ 1.38
IPO4-215ENST00000560935 MMP19Q99542 508 aa23.66■■□□□ 1.38
IPO4-215ENST00000560935 RNF41Q9H4P4 317 aaPredicted RBP23.66■■□□□ 1.38
IPO4-215ENST00000560935 ZNFX1Q9P2E3 1918 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms