RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 MYLIPQ8WY64 445 aa22.53■■□□□ 1.2
TRIP4-211ENST00000560920 PRUNE2Q8WUY3 3088 aa22.53■■□□□ 1.2
TRIP4-211ENST00000560920 EPHB4P54760 987 aa22.52■■□□□ 1.2
TRIP4-211ENST00000560920 DNAJC2Q99543 621 aaKnown RBP22.52■■□□□ 1.2
TRIP4-211ENST00000560920 XPNPEP3Q9NQH7 507 aa22.52■■□□□ 1.2
TRIP4-211ENST00000560920 NRBP1Q9UHY1 535 aa22.52■■□□□ 1.2
TRIP4-211ENST00000560920 PARP14Q460N5 1801 aa22.52■■□□□ 1.2
TRIP4-211ENST00000560920 WDR46O15213 610 aaKnown RBP22.51■■□□□ 1.19
TRIP4-211ENST00000560920 SLC25A27O95847 323 aa22.51■■□□□ 1.19
TRIP4-211ENST00000560920 PGK2P07205 417 aa22.51■■□□□ 1.19
TRIP4-211ENST00000560920 TAL1P17542 331 aaPredicted RBP22.51■■□□□ 1.19
TRIP4-211ENST00000560920 HSP90AB4PQ58FF6 505 aa22.51■■□□□ 1.19
TRIP4-211ENST00000560920 SH2D4AQ9H788 454 aa22.51■■□□□ 1.19
TRIP4-211ENST00000560920 FBXO28Q9NVF7 368 aa22.51■■□□□ 1.19
TRIP4-211ENST00000560920 TACC3Q9Y6A5 838 aa22.51■■□□□ 1.19
TRIP4-211ENST00000560920 CYP2D7A0A087X1C5 515 aa22.5■■□□□ 1.19
TRIP4-211ENST00000560920 PGK1P00558 417 aa22.5■■□□□ 1.19
TRIP4-211ENST00000560920 RARBP10826 455 aa22.5■■□□□ 1.19
TRIP4-211ENST00000560920 CDK8P49336 464 aa22.5■■□□□ 1.19
TRIP4-211ENST00000560920 ZNF792Q3KQV3 632 aa22.5■■□□□ 1.19
TRIP4-211ENST00000560920 RIOX2Q8IUF8 465 aa22.5■■□□□ 1.19
TRIP4-211ENST00000560920 CCDC17Q96LX7 622 aa22.5■■□□□ 1.19
TRIP4-211ENST00000560920 MMP19Q99542 508 aa22.5■■□□□ 1.19
TRIP4-211ENST00000560920 TINF2Q9BSI4 451 aa22.5■■□□□ 1.19
TRIP4-211ENST00000560920 ATP8A2Q9NTI2 1148 aa22.5■■□□□ 1.19
TRIP4-211ENST00000560920 C12orf60Q5U649 245 aa22.49■■□□□ 1.19
TRIP4-211ENST00000560920 CLASRPQ8N2M8 674 aaKnown RBP22.49■■□□□ 1.19
TRIP4-211ENST00000560920 PANK1Q8TE04 598 aa22.49■■□□□ 1.19
TRIP4-211ENST00000560920 DIS3Q9Y2L1 958 aaKnown RBP22.49■■□□□ 1.19
TRIP4-211ENST00000560920 COL11A1P12107 1806 aaPredicted RBP22.49■■□□□ 1.19
TRIP4-211ENST00000560920 MYH8P13535 1937 aa22.49■■□□□ 1.19
TRIP4-211ENST00000560920 SPTBN5Q9NRC6 3674 aaKnown RBP22.49■■□□□ 1.19
TRIP4-211ENST00000560920 APBB1O00213 710 aa22.48■■□□□ 1.19
TRIP4-211ENST00000560920 KIAA0355O15063 1070 aa22.48■■□□□ 1.19
TRIP4-211ENST00000560920 MBD4O95243 580 aa22.48■■□□□ 1.19
TRIP4-211ENST00000560920 CLTBP09497 229 aa22.48■■□□□ 1.19
TRIP4-211ENST00000560920 ZNF865P0CJ78 1059 aaPredicted RBP22.48■■□□□ 1.19
TRIP4-211ENST00000560920 EEF2P13639 858 aaKnown RBP22.48■■□□□ 1.19
TRIP4-211ENST00000560920 ADD2P35612 726 aa22.48■■□□□ 1.19
TRIP4-211ENST00000560920 RNF180Q86T96 592 aa22.48■■□□□ 1.19
TRIP4-211ENST00000560920 BAZ2AQ9UIF9 1905 aaKnown RBP22.48■■□□□ 1.19
TRIP4-211ENST00000560920 USP17L12C9JPN9 530 aa22.47■■□□□ 1.19
TRIP4-211ENST00000560920 USP17L21D6R901 530 aa22.47■■□□□ 1.19
TRIP4-211ENST00000560920 VWA5AO00534 786 aa22.47■■□□□ 1.19
TRIP4-211ENST00000560920 CHGBP05060 677 aa22.47■■□□□ 1.19
TRIP4-211ENST00000560920 STAT3P40763 770 aa22.47■■□□□ 1.19
TRIP4-211ENST00000560920 C16orf86Q6ZW13 317 aa22.47■■□□□ 1.19
TRIP4-211ENST00000560920 REPS2Q8NFH8 660 aa22.47■■□□□ 1.19
TRIP4-211ENST00000560920 KIF1BPQ96EK5 621 aa22.47■■□□□ 1.19
TRIP4-211ENST00000560920 ZNF214Q9UL59 606 aaPredicted RBP22.47■■□□□ 1.19
TRIP4-211ENST00000560920 A0A1W2PQ45 241 aaPredicted RBP22.46■■□□□ 1.19
TRIP4-211ENST00000560920 A0A1W2PQY0 241 aa22.46■■□□□ 1.19
TRIP4-211ENST00000560920 IFIT2P09913 472 aaKnown RBP22.46■■□□□ 1.19
TRIP4-211ENST00000560920 KCTD2Q14681 263 aa22.46■■□□□ 1.19
TRIP4-211ENST00000560920 LENG1Q96BZ8 264 aaPredicted RBP22.46■■□□□ 1.19
TRIP4-211ENST00000560920 RNPC3Q96LT9 517 aaKnown RBP22.46■■□□□ 1.19
TRIP4-211ENST00000560920 KANSL2Q9H9L4 492 aa22.46■■□□□ 1.19
TRIP4-211ENST00000560920 PAG1Q9NWQ8 432 aa22.46■■□□□ 1.19
TRIP4-211ENST00000560920 PPP1R9AQ9ULJ8 1098 aa22.46■■□□□ 1.19
TRIP4-211ENST00000560920 PLXNA1Q9UIW2 1896 aa22.45■■□□□ 1.19
TRIP4-211ENST00000560920 PQBP1O60828 265 aaKnown RBP22.45■■□□□ 1.18
TRIP4-211ENST00000560920 ADAMTS4O75173 837 aa22.45■■□□□ 1.18
TRIP4-211ENST00000560920 FOSL2P15408 326 aa22.45■■□□□ 1.18
TRIP4-211ENST00000560920 RAG1P15918 1043 aa22.45■■□□□ 1.18
TRIP4-211ENST00000560920 BOLA2Q9H3K6 86 aa22.45■■□□□ 1.18
TRIP4-211ENST00000560920 ROBO3Q96MS0 1386 aa22.45■■□□□ 1.18
TRIP4-211ENST00000560920 TMEM265A0A087WTH1 108 aa22.44■■□□□ 1.18
TRIP4-211ENST00000560920 AKR1A1P14550 325 aa22.44■■□□□ 1.18
TRIP4-211ENST00000560920 FAAP100Q0VG06 881 aa22.44■■□□□ 1.18
TRIP4-211ENST00000560920 FAM83BQ5T0W9 1011 aa22.44■■□□□ 1.18
TRIP4-211ENST00000560920 SIRT2Q8IXJ6 389 aa22.44■■□□□ 1.18
TRIP4-211ENST00000560920 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.44■■□□□ 1.18
TRIP4-211ENST00000560920 BCL11AQ9H165 835 aa22.44■■□□□ 1.18
TRIP4-211ENST00000560920 TMEM39AQ9NV64 488 aa22.44■■□□□ 1.18
TRIP4-211ENST00000560920 ATP5JP18859 108 aa22.43■■□□□ 1.18
TRIP4-211ENST00000560920 FPGSQ05932 587 aa22.43■■□□□ 1.18
TRIP4-211ENST00000560920 CTR9Q6PD62 1173 aa22.43■■□□□ 1.18
TRIP4-211ENST00000560920 ANKRD33Q7Z3H0 272 aa22.43■■□□□ 1.18
TRIP4-211ENST00000560920 TOX2Q96NM4 488 aa22.43■■□□□ 1.18
TRIP4-211ENST00000560920 TSEN34Q9BSV6 310 aaKnown RBP22.43■■□□□ 1.18
TRIP4-211ENST00000560920 ZBED9Q6R2W3 1325 aa22.42■■□□□ 1.18
TRIP4-211ENST00000560920 ACLYP53396 1101 aa22.42■■□□□ 1.18
TRIP4-211ENST00000560920 GRIN2CQ14957 1233 aa22.42■■□□□ 1.18
TRIP4-211ENST00000560920 RPAP2Q8IXW5 612 aaPredicted RBP22.42■■□□□ 1.18
TRIP4-211ENST00000560920 KLHDC9Q8NEP7 349 aa22.42■■□□□ 1.18
TRIP4-211ENST00000560920 GOPCQ9HD26 462 aa22.42■■□□□ 1.18
TRIP4-211ENST00000560920 CNPY2Q9Y2B0 182 aa22.42■■□□□ 1.18
TRIP4-211ENST00000560920 SNAI1O95863 264 aaPredicted RBP22.41■■□□□ 1.18
TRIP4-211ENST00000560920 COPB2P35606 906 aa22.41■■□□□ 1.18
TRIP4-211ENST00000560920 UBE3CQ15386 1083 aa22.41■■□□□ 1.18
TRIP4-211ENST00000560920 CCSAPQ6IQ19 270 aaPredicted RBP22.41■■□□□ 1.18
TRIP4-211ENST00000560920 AMOTL1Q8IY63 956 aa22.41■■□□□ 1.18
TRIP4-211ENST00000560920 HAUS7Q99871 368 aa22.41■■□□□ 1.18
TRIP4-211ENST00000560920 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.41■■□□□ 1.18
TRIP4-211ENST00000560920 SLC4A4Q9Y6R1 1079 aa22.41■■□□□ 1.18
TRIP4-211ENST00000560920 SYNRGQ9UMZ2 1314 aa22.4■■□□□ 1.18
TRIP4-211ENST00000560920 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.4■■□□□ 1.18
TRIP4-211ENST00000560920 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.4■■□□□ 1.18
TRIP4-211ENST00000560920 RAD21O60216 631 aa22.4■■□□□ 1.18
TRIP4-211ENST00000560920 RAB11FIP3O75154 756 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms