RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 M0R2C6 588 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 GPAA1O43292 621 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 USP17L8P0C7I0 530 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 GNAT2P19087 354 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 CRKP46108 304 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 GMPSP49915 693 aaPredicted RBP6.56□□□□□ -1.36
ZEB1-220ENST00000560909 SCNN1DP51172 638 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 MFAP1P55081 439 aaKnown RBP6.56□□□□□ -1.36
ZEB1-220ENST00000560909 AGERQ15109 404 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 DIXDC1Q155Q3 683 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 TSGA10IPQ3SY00 556 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 PRPF38BQ5VTL8 546 aaKnown RBP6.56□□□□□ -1.36
ZEB1-220ENST00000560909 CASC1Q6TDU7 716 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 CWC27Q6UX04 472 aaKnown RBP6.56□□□□□ -1.36
ZEB1-220ENST00000560909 DZIP1Q86YF9 867 aaKnown RBP6.56□□□□□ -1.36
ZEB1-220ENST00000560909 TEKT1Q969V4 418 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 SEC62Q99442 399 aaKnown RBP6.56□□□□□ -1.36
ZEB1-220ENST00000560909 DSCC1Q9BVC3 393 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 IDI2Q9BXS1 227 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 USP26Q9BXU7 913 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 GPRC5DQ9NZD1 345 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 RNF114Q9Y508 228 aa6.56□□□□□ -1.36
ZEB1-220ENST00000560909 DICER1Q9UPY3 1922 aaKnown RBP6.56□□□□□ -1.36
ZEB1-220ENST00000560909 CCDC171Q6TFL3 1326 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 MAGEB6P1A0A0J9YX57 407 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 GSG1L2A8MUP6 293 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 PATL2C9JE40 543 aaKnown RBP6.55□□□□□ -1.36
ZEB1-220ENST00000560909 WDHD1O75717 1129 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-220ENST00000560909 REC8O95072 547 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 BAG3O95817 575 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 HSPD1P10809 573 aaKnown RBP6.55□□□□□ -1.36
ZEB1-220ENST00000560909 PTH1RQ03431 593 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 NECTIN1Q15223 517 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 CDC42EP5Q6NZY7 148 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 RIPOR1Q6ZS17 1223 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 KIAA0825Q8IV33 1275 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 LCORLQ8N3X6 602 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 PRMT6Q96LA8 375 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-220ENST00000560909 ATP8A2Q9NTI2 1148 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 PGAP2Q9UHJ9 254 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 CNOT7Q9UIV1 285 aaKnown RBP6.55□□□□□ -1.36
ZEB1-220ENST00000560909 HDAC9Q9UKV0 1011 aa6.55□□□□□ -1.36
ZEB1-220ENST00000560909 WNT10BO00744 389 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 ZMYND10O75800 440 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 DDNO94850 711 aaPredicted RBP6.54□□□□□ -1.36
ZEB1-220ENST00000560909 MBD4O95243 580 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 FGRP09769 529 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 CLCN1P35523 988 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 BTDP43251 543 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 RBM25P49756 843 aaKnown RBP6.54□□□□□ -1.36
ZEB1-220ENST00000560909 DYNLL1P63167 89 aaKnown RBP6.54□□□□□ -1.36
ZEB1-220ENST00000560909 CFAP100Q494V2 611 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 SBK1Q52WX2 424 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 VPS53Q5VIR6 699 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 CCDC129Q6ZRS4 1044 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 METTL16Q86W50 562 aaKnown RBP6.54□□□□□ -1.36
ZEB1-220ENST00000560909 OGFOD1Q8N543 542 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 AIDAQ96BJ3 306 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 EPB41L4AQ9HCS5 686 aaPredicted RBP6.54□□□□□ -1.36
ZEB1-220ENST00000560909 MYOZ2Q9NPC6 264 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 ANAPC4Q9UJX5 808 aa6.54□□□□□ -1.36
ZEB1-220ENST00000560909 SHTN1A0MZ66 631 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 H7C1D1 291 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 PRKAB2O43741 272 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 ENTPD3O75355 529 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 EGFRP00533 1210 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 FGAP02671 866 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 HSPA4P34932 840 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 EPS15P42566 896 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 NT5C2P49902 561 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 HIRAP54198 1017 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-220ENST00000560909 ANAPC15P60006 121 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 DLGAP5Q15398 846 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 VASH1Q7L8A9 365 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-220ENST00000560909 FAM83AQ86UY5 434 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 IFNL3Q8IZI9 196 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 MIGA1Q8NAN2 632 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 IL27Q8NEV9 243 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 SH3RF3Q8TEJ3 882 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-220ENST00000560909 ZC3H15Q8WU90 426 aaKnown RBP6.53□□□□□ -1.36
ZEB1-220ENST00000560909 TBC1D32Q96NH3 1257 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 CRNKL1Q9BZJ0 848 aaKnown RBP6.53□□□□□ -1.36
ZEB1-220ENST00000560909 ARMT1Q9H993 441 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 DCP1AQ9NPI6 582 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-220ENST00000560909 PGPEP1Q9NXJ5 209 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 AATFQ9NY61 560 aaKnown RBP eCLIP6.53□□□□□ -1.36
ZEB1-220ENST00000560909 ZNF70Q9UC06 446 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-220ENST00000560909 CTNNA3Q9UI47 895 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 GDF2Q9UK05 429 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-220ENST00000560909 PCDHAC2Q9Y5I4 1007 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 ATRNL1Q5VV63 1379 aa6.53□□□□□ -1.36
ZEB1-220ENST00000560909 COL2A1P02458 1487 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-220ENST00000560909 PITPNM2Q9BZ72 1349 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 MYO5AQ9Y4I1 1855 aaKnown RBP6.52□□□□□ -1.37
ZEB1-220ENST00000560909 F8W031 263 aaPredicted RBP6.52□□□□□ -1.37
ZEB1-220ENST00000560909 MDM2Q00987 491 aaPredicted RBP6.52□□□□□ -1.37
ZEB1-220ENST00000560909 GABPAQ06546 454 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 NFIAQ12857 509 aa6.52□□□□□ -1.37
ZEB1-220ENST00000560909 NBPF9Q3BBW0 867 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms