RNA–Protein interactions for RNA: ENST00000560890.5

APH1B-210, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-210ENST00000560890 OTUD7BQ6GQQ9 843 aa10.3□□□□□ -0.76
APH1B-210ENST00000560890 GADL1Q6ZQY3 521 aa10.3□□□□□ -0.76
APH1B-210ENST00000560890 PRRT2Q7Z6L0 340 aaPredicted RBP10.3□□□□□ -0.76
APH1B-210ENST00000560890 ZNF654Q8IZM8 581 aa10.3□□□□□ -0.76
APH1B-210ENST00000560890 SPICE1Q8N0Z3 855 aa10.3□□□□□ -0.76
APH1B-210ENST00000560890 PROCA1Q8NCQ7 364 aaPredicted RBP10.3□□□□□ -0.76
APH1B-210ENST00000560890 CTCFLQ8NI51 663 aaPredicted RBP10.3□□□□□ -0.76
APH1B-210ENST00000560890 DCAF4Q8WV16 495 aa10.3□□□□□ -0.76
APH1B-210ENST00000560890 ZNF274Q96GC6 653 aaPredicted RBP10.3□□□□□ -0.76
APH1B-210ENST00000560890 MS4A4AQ96JQ5 239 aa10.3□□□□□ -0.76
APH1B-210ENST00000560890 C12orf42Q96LP6 360 aa10.3□□□□□ -0.76
APH1B-210ENST00000560890 MAP3K14Q99558 947 aa10.3□□□□□ -0.76
APH1B-210ENST00000560890 SENP2Q9HC62 589 aa10.3□□□□□ -0.76
APH1B-210ENST00000560890 ISY1Q9ULR0 285 aaKnown RBP10.3□□□□□ -0.76
APH1B-210ENST00000560890 LIMCH1Q9UPQ0 1083 aa10.3□□□□□ -0.76
APH1B-210ENST00000560890 CCDC196A0A1B0GTZ2 297 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 TESPA1A2RU30 521 aaPredicted RBP10.29□□□□□ -0.76
APH1B-210ENST00000560890 FAM155AB1AL88 458 aaPredicted RBP10.29□□□□□ -0.76
APH1B-210ENST00000560890 USP17L15C9J2P7 530 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 USP17L13C9JLJ4 530 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 USP17L11C9JVI0 530 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 USP17L18D6R9N7 530 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 USP17L22D6RA61 530 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 USP17L17D6RBQ6 530 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 USP17L19D6RCP7 530 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 USP17L20D6RJB6 530 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 WDR46O15213 610 aaKnown RBP10.29□□□□□ -0.76
APH1B-210ENST00000560890 PARP1P09874 1014 aaKnown RBP10.29□□□□□ -0.76
APH1B-210ENST00000560890 OSBPP22059 807 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 MAP2K2P36507 400 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 GNAQP50148 359 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 EVCP57679 992 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 HTRA3P83110 453 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 APOBRQ0VD83 1088 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 USP17L24Q0WX57 530 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 SREBF2Q12772 1141 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 TROAPQ12815 778 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 TOB2Q14106 344 aaPredicted RBP10.29□□□□□ -0.76
APH1B-210ENST00000560890 CCDC96Q2M329 555 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 GPATCH4Q5T3I0 446 aaKnown RBP10.29□□□□□ -0.76
APH1B-210ENST00000560890 FANCBQ8NB91 859 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 CHURC1Q8WUH1 139 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 GMCL1Q96IK5 515 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 ZSCAN31Q96LW9 406 aaPredicted RBP10.29□□□□□ -0.76
APH1B-210ENST00000560890 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
APH1B-210ENST00000560890 SLKQ9H2G2 1235 aaPredicted RBP10.29□□□□□ -0.76
APH1B-210ENST00000560890 HOXC10Q9NYD6 342 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 BRPF3Q9ULD4 1205 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 TRPC6Q9Y210 931 aa10.29□□□□□ -0.76
APH1B-210ENST00000560890 WDR33Q9C0J8 1336 aaKnown RBP10.29□□□□□ -0.76
APH1B-210ENST00000560890 DHX16O60231 1041 aaKnown RBP10.28□□□□□ -0.76
APH1B-210ENST00000560890 PDHBP11177 359 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 VCAM1P19320 739 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 PDIA3P30101 505 aaKnown RBP10.28□□□□□ -0.76
APH1B-210ENST00000560890 HOXA7P31268 230 aaPredicted RBP10.28□□□□□ -0.76
APH1B-210ENST00000560890 TM4SF4P48230 202 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 VEGFBP49765 207 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 RCAN1P53805 252 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 IKQ13123 557 aaPredicted RBP10.28□□□□□ -0.76
APH1B-210ENST00000560890 COG2Q14746 738 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 ASPRV1Q53RT3 343 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 FAM83BQ5T0W9 1011 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 APOA5Q6Q788 366 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 ANKRD23Q86SG2 305 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 FAM160B2Q86V87 743 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 BRI3BPQ8WY22 251 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 LZTS2Q9BRK4 669 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 RPAP3Q9H6T3 665 aaPredicted RBP10.28□□□□□ -0.76
APH1B-210ENST00000560890 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 RBM28Q9NW13 759 aaKnown RBP10.28□□□□□ -0.76
APH1B-210ENST00000560890 FEM1BQ9UK73 627 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 AGTPBP1Q9UPW5 1226 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 MYH7P12883 1935 aa10.28□□□□□ -0.76
APH1B-210ENST00000560890 PAPPA2Q9BXP8 1791 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 GOLGA8AA7E2F4 631 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 GOLGA8BA8MQT2 603 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 BTBD19C9JJ37 291 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 TMEM232C9JQI7 657 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 KLRF2D3W0D1 207 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 SNHG28P0DPA3 235 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 METAP2P50579 478 aaKnown RBP eCLIP10.27□□□□□ -0.77
APH1B-210ENST00000560890 IRX3P78415 501 aaPredicted RBP10.27□□□□□ -0.77
APH1B-210ENST00000560890 ZNF543Q08ER8 600 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 GRM4Q14833 912 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 RTN1Q16799 776 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 KIAA1755Q5JYT7 1200 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 GPAT2Q6NUI2 795 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 CPLX2Q6PUV4 134 aaKnown RBP10.27□□□□□ -0.77
APH1B-210ENST00000560890 CATSPERGQ6ZRH7 1159 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 KCTD1Q719H9 257 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 NOL8Q76FK4 1167 aaKnown RBP10.27□□□□□ -0.77
APH1B-210ENST00000560890 MICU3Q86XE3 530 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.77
APH1B-210ENST00000560890 NUP88Q99567 741 aaPredicted RBP10.27□□□□□ -0.77
APH1B-210ENST00000560890 MYL10Q9BUA6 226 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 TANGO6Q9C0B7 1094 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 PNMA3Q9UL41 463 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 TPCN1Q9ULQ1 816 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.77
APH1B-210ENST00000560890 SLC45A1Q9Y2W3 748 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms