RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 TRHRP34981 398 aaPredicted RBP7.36□□□□□ -1.23
PSMA4-221ENST00000560842 APOBRQ0VD83 1088 aa7.36□□□□□ -1.23
PSMA4-221ENST00000560842 IRF2BP1Q8IU81 584 aa7.36□□□□□ -1.23
PSMA4-221ENST00000560842 MARCH10Q8NA82 808 aaPredicted RBP7.36□□□□□ -1.23
PSMA4-221ENST00000560842 PIWIL2Q8TC59 973 aaKnown RBP7.36□□□□□ -1.23
PSMA4-221ENST00000560842 BRMS1Q9HCU9 246 aa7.36□□□□□ -1.23
PSMA4-221ENST00000560842 MYOCOSA0A1B0GUC4 107 aa7.35□□□□□ -1.23
PSMA4-221ENST00000560842 TLR3O15455 904 aaKnown RBP7.35□□□□□ -1.23
PSMA4-221ENST00000560842 SEMA7AO75326 666 aa7.35□□□□□ -1.23
PSMA4-221ENST00000560842 HTR3BO95264 441 aa7.35□□□□□ -1.23
PSMA4-221ENST00000560842 SYN1P17600 705 aa7.35□□□□□ -1.23
PSMA4-221ENST00000560842 NKD1Q969G9 470 aa7.35□□□□□ -1.23
PSMA4-221ENST00000560842 TMEM87BQ96K49 555 aa7.35□□□□□ -1.23
PSMA4-221ENST00000560842 PLCG1P19174 1290 aa7.34□□□□□ -1.23
PSMA4-221ENST00000560842 PAK2Q13177 524 aa7.34□□□□□ -1.23
PSMA4-221ENST00000560842 SEZ6Q53EL9 994 aa7.34□□□□□ -1.23
PSMA4-221ENST00000560842 CREG2Q8IUH2 290 aa7.34□□□□□ -1.23
PSMA4-221ENST00000560842 SLFN12Q8IYM2 578 aa7.34□□□□□ -1.23
PSMA4-221ENST00000560842 LILRA2Q8N149 483 aa7.34□□□□□ -1.23
PSMA4-221ENST00000560842 PDZD8Q8NEN9 1154 aa7.34□□□□□ -1.23
PSMA4-221ENST00000560842 SPATA32Q96LK8 384 aa7.34□□□□□ -1.23
PSMA4-221ENST00000560842 SLC6A17Q9H1V8 727 aa7.34□□□□□ -1.23
PSMA4-221ENST00000560842 REV1Q9UBZ9 1251 aa7.34□□□□□ -1.23
PSMA4-221ENST00000560842 WASH4PA8MWX3 477 aa7.33□□□□□ -1.24
PSMA4-221ENST00000560842 GRIN3BO60391 1043 aa7.33□□□□□ -1.24
PSMA4-221ENST00000560842 COL9A2Q14055 689 aaPredicted RBP7.33□□□□□ -1.24
PSMA4-221ENST00000560842 NFIXQ14938 502 aa7.33□□□□□ -1.24
PSMA4-221ENST00000560842 TCERG1LQ5VWI1 586 aa7.33□□□□□ -1.24
PSMA4-221ENST00000560842 PRAMEF13Q5VWM6 474 aa7.33□□□□□ -1.24
PSMA4-221ENST00000560842 C19orf44Q9H6X5 657 aa7.33□□□□□ -1.24
PSMA4-221ENST00000560842 CNOT6Q9ULM6 557 aaKnown RBP7.33□□□□□ -1.24
PSMA4-221ENST00000560842 PCDHB14Q9Y5E9 798 aa7.33□□□□□ -1.24
PSMA4-221ENST00000560842 TEX51A0A1B0GUA7 166 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 DNAJA2O60884 412 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 ERCC5P28715 1186 aaPredicted RBP7.32□□□□□ -1.24
PSMA4-221ENST00000560842 SOX9P48436 509 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 ZNF165P49910 485 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 CLCQ05315 142 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 GAB4Q2WGN9 574 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 ZNF385BQ569K4 471 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 ZNF605Q86T29 641 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 CDH24Q86UP0 819 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 DUSP15Q9H1R2 295 aaPredicted RBP7.32□□□□□ -1.24
PSMA4-221ENST00000560842 ACBD3Q9H3P7 528 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 ZNF552Q9H707 407 aaPredicted RBP7.32□□□□□ -1.24
PSMA4-221ENST00000560842 CWC22Q9HCG8 908 aaKnown RBP7.32□□□□□ -1.24
PSMA4-221ENST00000560842 RTEL1Q9NZ71 1219 aa7.32□□□□□ -1.24
PSMA4-221ENST00000560842 MEIS3P2A8K0S8 358 aa7.31□□□□□ -1.24
PSMA4-221ENST00000560842 OXR1Q8N573 874 aa7.31□□□□□ -1.24
PSMA4-221ENST00000560842 CXorf38Q8TB03 319 aa7.31□□□□□ -1.24
PSMA4-221ENST00000560842 XAGE3Q8WTP9 111 aa7.31□□□□□ -1.24
PSMA4-221ENST00000560842 GPRASP2Q96D09 838 aa7.31□□□□□ -1.24
PSMA4-221ENST00000560842 GCM1Q9NP62 436 aa7.31□□□□□ -1.24
PSMA4-221ENST00000560842 KCTD3Q9Y597 815 aa7.31□□□□□ -1.24
PSMA4-221ENST00000560842 SLC22A31A6NKX4 558 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 UPK3BL1B0FP48 263 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 UPK3BL2E5RIL1 263 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 TRIM13O60858 407 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 ZGLP1P0C6A0 271 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 TPP2P29144 1249 aaPredicted RBP7.3□□□□□ -1.24
PSMA4-221ENST00000560842 YARSP54577 528 aaKnown RBP7.3□□□□□ -1.24
PSMA4-221ENST00000560842 NR0B2Q15466 257 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 CDCP2Q5VXM1 449 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 RBBP8NLQ8NC74 664 aaPredicted RBP7.3□□□□□ -1.24
PSMA4-221ENST00000560842 DNAJB8Q8NHS0 232 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 PPP1R13LQ8WUF5 828 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 Q96M66 194 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 CCSER2Q9H7U1 834 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 GMIPQ9P107 970 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 ZNRF3Q9ULT6 936 aa7.3□□□□□ -1.24
PSMA4-221ENST00000560842 FITM1A5D6W6 292 aa7.29□□□□□ -1.24
PSMA4-221ENST00000560842 CHURC1-FNTBB4DL54 471 aa7.29□□□□□ -1.24
PSMA4-221ENST00000560842 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
PSMA4-221ENST00000560842 LRRFIP1Q32MZ4 808 aaKnown RBP7.29□□□□□ -1.24
PSMA4-221ENST00000560842 TIGD5Q53EQ6 642 aa7.29□□□□□ -1.24
PSMA4-221ENST00000560842 TMEM132EQ6IEE7 984 aa7.29□□□□□ -1.24
PSMA4-221ENST00000560842 TMEM151BQ8IW70 566 aa7.29□□□□□ -1.24
PSMA4-221ENST00000560842 FAM13CQ8NE31 585 aa7.29□□□□□ -1.24
PSMA4-221ENST00000560842 CYB5D2Q8WUJ1 264 aa7.29□□□□□ -1.24
PSMA4-221ENST00000560842 INTS4Q96HW7 963 aaKnown RBP7.29□□□□□ -1.24
PSMA4-221ENST00000560842 SEC16BQ96JE7 1060 aa7.29□□□□□ -1.24
PSMA4-221ENST00000560842 TRIT1Q9H3H1 467 aaKnown RBP7.29□□□□□ -1.24
PSMA4-221ENST00000560842 YBX2Q9Y2T7 364 aaKnown RBP7.29□□□□□ -1.24
PSMA4-221ENST00000560842 IMPDH2P12268 514 aa7.28□□□□□ -1.24
PSMA4-221ENST00000560842 MLECQ14165 292 aa7.28□□□□□ -1.24
PSMA4-221ENST00000560842 GK5Q6ZS86 529 aa7.28□□□□□ -1.24
PSMA4-221ENST00000560842 XYLT2Q9H1B5 865 aa7.28□□□□□ -1.24
PSMA4-221ENST00000560842 CNNM2Q9H8M5 875 aa7.28□□□□□ -1.24
PSMA4-221ENST00000560842 GINM1Q9NU53 330 aa7.28□□□□□ -1.24
PSMA4-221ENST00000560842 CEP131Q9UPN4 1083 aa7.28□□□□□ -1.24
PSMA4-221ENST00000560842 RFXAPO00287 272 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 MCM4P33991 863 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 ETV3P41162 512 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 TNNI2P48788 182 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 EGR3Q06889 387 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 SKOR2Q2VWA4 1001 aaPredicted RBP7.27□□□□□ -1.25
PSMA4-221ENST00000560842 DHX38Q92620 1227 aaKnown RBP7.27□□□□□ -1.25
PSMA4-221ENST00000560842 ATG4CQ96DT6 458 aa7.27□□□□□ -1.25
PSMA4-221ENST00000560842 DPH2Q9BQC3 489 aaPredicted RBP7.27□□□□□ -1.25
PSMA4-221ENST00000560842 TINF2Q9BSI4 451 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms