RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CCDC192P0DO97 292 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 TRAPPC10P48553 1259 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 TNIP1Q15025 636 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 CAMK4Q16566 473 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 EARS2Q5JPH6 523 aaKnown RBP14.82□□□□□ -0.04
SNX1-211ENST00000560829 WWC2Q6AWC2 1192 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 TMEM179Q6ZVK1 233 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 RASGRP2Q7LDG7 609 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 LRRC47Q8N1G4 583 aaKnown RBP14.82□□□□□ -0.04
SNX1-211ENST00000560829 TRIM34Q9BYJ4 488 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 KANSL2Q9H9L4 492 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 HERC5Q9UII4 1024 aaKnown RBP14.82□□□□□ -0.04
SNX1-211ENST00000560829 FER1L6Q2WGJ9 1857 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 KINO60870 393 aaKnown RBP14.82□□□□□ -0.04
SNX1-211ENST00000560829 BMP15O95972 392 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 SLURP2P0DP57 97 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 PTPREP23469 700 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 MARCKSP29966 332 aaPredicted RBP14.82□□□□□ -0.04
SNX1-211ENST00000560829 NDUFA8P51970 172 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 TYW1BQ6NUM6 668 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 CLEC10AQ8IUN9 316 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 NOL7Q9UMY1 257 aaKnown RBP14.82□□□□□ -0.04
SNX1-211ENST00000560829 PCDHA4Q9UN74 947 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 MTMR7Q9Y216 660 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 HPSEQ9Y251 543 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 PCDHB6Q9Y5E3 794 aa14.82□□□□□ -0.04
SNX1-211ENST00000560829 CNTNAP1P78357 1384 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 A0A1B0GVL5 298 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 TRIM75PA6NK02 468 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 hCG_1984214I3L0E3 225 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 M0R2N6 131 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 STXBP3O00186 592 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 MPHOSPH10O00566 681 aaKnown RBP14.81□□□□□ -0.04
SNX1-211ENST00000560829 RPS12P25398 132 aaKnown RBP14.81□□□□□ -0.04
SNX1-211ENST00000560829 EIF6P56537 245 aaKnown RBP14.81□□□□□ -0.04
SNX1-211ENST00000560829 ZNF543Q08ER8 600 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 GPATCH4Q5T3I0 446 aaKnown RBP14.81□□□□□ -0.04
SNX1-211ENST00000560829 SHC4Q6S5L8 630 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 FAM83AQ86UY5 434 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 BLIDQ8IZY5 108 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 ZNF713Q8N859 430 aaPredicted RBP14.81□□□□□ -0.04
SNX1-211ENST00000560829 KRI1Q8N9T8 703 aaKnown RBP14.81□□□□□ -0.04
SNX1-211ENST00000560829 PIBF1Q8WXW3 757 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 GPKOWQ92917 476 aaPredicted RBP eCLIP14.81□□□□□ -0.04
SNX1-211ENST00000560829 RRP36Q96EU6 259 aaKnown RBP14.81□□□□□ -0.04
SNX1-211ENST00000560829 CSRNP1Q96S65 589 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 BCS1LQ9Y276 419 aa14.81□□□□□ -0.04
SNX1-211ENST00000560829 CLRN2A0PK11 232 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 FAM205CA6NFA0 338 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 FAM196BA6NMK8 535 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 PFKFB1P16118 471 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 ZNF280AP59817 542 aaPredicted RBP14.8□□□□□ -0.04
SNX1-211ENST00000560829 UVSSAQ2YD98 709 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 RESP18Q5W5W9 173 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 ZNF579Q8NAF0 562 aaKnown RBP14.8□□□□□ -0.04
SNX1-211ENST00000560829 CCDC12Q8WUD4 166 aaPredicted RBP14.8□□□□□ -0.04
SNX1-211ENST00000560829 FBXO2Q9UK22 296 aaPredicted RBP14.8□□□□□ -0.04
SNX1-211ENST00000560829 SYNPO2Q9UMS6 1093 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 PSDA5PKW4 1024 aaPredicted RBP14.8□□□□□ -0.04
SNX1-211ENST00000560829 TCP10L2B9ZVM9 353 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 TYRO3Q06418 890 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 ABCB5Q2M3G0 1257 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 TIGD1Q96MW7 591 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 ZMYND12Q9H0C1 365 aa14.8□□□□□ -0.04
SNX1-211ENST00000560829 SRPRBQ9Y5M8 271 aaKnown RBP14.8□□□□□ -0.04
SNX1-211ENST00000560829 ESYT2A0FGR8 921 aa14.79□□□□□ -0.04
SNX1-211ENST00000560829 EEF2P13639 858 aaKnown RBP14.79□□□□□ -0.04
SNX1-211ENST00000560829 HEATR3Q7Z4Q2 680 aa14.79□□□□□ -0.04
SNX1-211ENST00000560829 SIAH1Q8IUQ4 282 aa14.79□□□□□ -0.04
SNX1-211ENST00000560829 CKAP2LQ8IYA6 745 aa14.79□□□□□ -0.04
SNX1-211ENST00000560829 CPVLQ9H3G5 476 aa14.79□□□□□ -0.04
SNX1-211ENST00000560829 SEC63Q9UGP8 760 aaKnown RBP14.79□□□□□ -0.04
SNX1-211ENST00000560829 FZD9O00144 591 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 WNT10BO00744 389 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 MYO1BO43795 1136 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 TBC1D12O60347 775 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 SEPT2Q15019 361 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 TTC38Q5R3I4 469 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 RNF214Q8ND24 703 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 DCAF4Q8WV16 495 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 ANP32BQ92688 251 aaKnown RBP14.78□□□□□ -0.04
SNX1-211ENST00000560829 PIGSQ96S52 555 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 PPP1R9BQ96SB3 815 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 UBA5Q9GZZ9 404 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 MYOZ2Q9NPC6 264 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 PGAP2Q9UHJ9 254 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 MRVI1Q9Y6F6 885 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 FRMPD2Q68DX3 1309 aaPredicted RBP14.78□□□□□ -0.04
SNX1-211ENST00000560829 MYH6P13533 1939 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 ADAMTS3O15072 1205 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 ZNF202O95125 648 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 ICA1Q05084 483 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 CCDC173Q0VFZ6 552 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 NOM1Q5C9Z4 860 aaKnown RBP14.78□□□□□ -0.04
SNX1-211ENST00000560829 SASS6Q6UVJ0 657 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 PIK3AP1Q6ZUJ8 805 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 GMCL1P1Q8NEA9 526 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 DPF2Q92785 391 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 MTMR8Q96EF0 704 aa14.78□□□□□ -0.04
SNX1-211ENST00000560829 CLIC6Q96NY7 704 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms