RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 C6orf229H3BNL8 230 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 SMARCA5O60264 1052 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 PDCP20941 246 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 RBL2Q08999 1139 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 ECM1Q16610 540 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 GLIPR1L2Q4G1C9 344 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 C1orf53Q5VUE5 145 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 TMTC3Q6ZXV5 915 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 MAGEF1Q9HAY2 307 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 ARHGEF10LQ9HCE6 1279 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 ZBTB21Q9ULJ3 1066 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 SLC4A4Q9Y6R1 1079 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 CNTNAP5Q8WYK1 1306 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 BRD1O95696 1058 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 FOSP01100 380 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 GCFC2P16383 781 aaKnown RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 RBM10P98175 930 aaKnown RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 ZNF543Q08ER8 600 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 GPAT2Q6NUI2 795 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 KCNV1Q6PIU1 500 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 LRSAM1Q6UWE0 723 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 B3GNT9Q6UX72 402 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 CATSPERGQ6ZRH7 1159 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 MFSD6Q6ZSS7 791 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 STOX1Q6ZVD7 989 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 BRAPQ7Z569 592 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 RIOX2Q8IUF8 465 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 TBC1D10CQ8IV04 446 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 PLCD3Q8N3E9 789 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 CCDC12Q8WUD4 166 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 CDCA5Q96FF9 252 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 MS4A4AQ96JQ5 239 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 PRMT6Q96LA8 375 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 NAP1L5Q96NT1 182 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 ZMYND12Q9H0C1 365 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 UPF3AQ9H1J1 476 aaKnown RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 BOLA2Q9H3K6 86 aa6.31□□□□□ -1.4
ZEB1-219ENST00000560721 ZSCAN16Q9H4T2 348 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 FAM217BQ9NTX9 383 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-219ENST00000560721 MYL1P05976 194 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 PTH1RQ03431 593 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 SREBF2Q12772 1141 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 USP48Q86UV5 1035 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 ZNF592Q92610 1267 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 RBSNQ9H1K0 784 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 IL1RAPL2Q9NP60 686 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 ZNF277Q9NRM2 450 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-219ENST00000560721 IL17RBQ9NRM6 502 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 PNMA3Q9UL41 463 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-219ENST00000560721 LYPLA2O95372 231 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 PTPRAP18433 802 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 FGD1P98174 961 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 PTPN11Q06124 597 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-219ENST00000560721 PFKFB3Q16875 520 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-219ENST00000560721 Q4G0T1 1027 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 MCTP1Q6DN14 999 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 PPP4R3AQ6IN85 833 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 BICDL1Q6ZP65 573 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 RPAINQ86UA6 219 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 BICD2Q8TD16 824 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 WNK4Q96J92 1243 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 TSPAN18Q96SJ8 248 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 NAPBQ9H115 298 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 MROH8Q9H579 483 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 MAD2L2Q9UI95 211 aa6.3□□□□□ -1.4
ZEB1-219ENST00000560721 PSDA5PKW4 1024 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-219ENST00000560721 NKRFO15226 690 aaKnown RBP eCLIP6.29□□□□□ -1.44e-7■■■□□ 16
ZEB1-219ENST00000560721 STRNO43815 780 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 CETPP11597 493 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 HOXC8P31273 242 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 NF2P35240 595 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 HSP90AA2PQ14568 343 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-219ENST00000560721 MSL1Q68DK7 614 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 SESTD1Q86VW0 696 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 IQCA1Q86XH1 822 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 RASAL3Q86YV0 1011 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 NEK9Q8TD19 979 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 FAM227BQ96M60 508 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 TIPINQ9BVW5 301 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 PDCL3Q9H2J4 239 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 DAAM1Q9Y4D1 1078 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 CST5P28325 142 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-219ENST00000560721 USP11P51784 963 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 BACE1P56817 501 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 RASSF7Q02833 373 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 GRIK5Q16478 980 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 PKN2Q16513 984 aaKnown RBP6.29□□□□□ -1.4
ZEB1-219ENST00000560721 ARL6IP4Q66PJ3 421 aaKnown RBP6.29□□□□□ -1.4
ZEB1-219ENST00000560721 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-219ENST00000560721 CHURC1Q8WUH1 139 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 DCPSQ96C86 337 aaKnown RBP6.29□□□□□ -1.4
ZEB1-219ENST00000560721 PHF20Q9BVI0 1012 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 SLC38A10Q9HBR0 1119 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 FOXD4L1Q9NU39 408 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 RNF181Q9P0P0 153 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 TMEM63CQ9P1W3 806 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 NEDD4P46934 1319 aa6.29□□□□□ -1.4
ZEB1-219ENST00000560721 USP17L15C9J2P7 530 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms