RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 CD99L2Q8TCZ2 262 aa18.23■□□□□ 0.51
LYSMD2-204ENST00000560491 KCNB2Q92953 911 aa18.23■□□□□ 0.51
LYSMD2-204ENST00000560491 TXNRD2Q9NNW7 524 aa18.23■□□□□ 0.51
LYSMD2-204ENST00000560491 ISY1Q9ULR0 285 aaKnown RBP18.23■□□□□ 0.51
LYSMD2-204ENST00000560491 SEC24BO95487 1268 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 BMP3P12645 472 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 ZKSCAN1P17029 563 aaPredicted RBP18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 GCLCP48506 637 aaPredicted RBP18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 COG2Q14746 738 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 CCDC178Q5BJE1 867 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 KCTD1Q719H9 257 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 ANKS1AQ92625 1134 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 GMCL1Q96IK5 515 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 NEK1Q96PY6 1258 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 PAGR1Q9BTK6 254 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 ARHGAP39Q9C0H5 1083 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 SENP2Q9HC62 589 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 SNX14Q9Y5W7 946 aa18.22■□□□□ 0.51
LYSMD2-204ENST00000560491 IFIT3O14879 490 aaKnown RBP18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 EPB41L2O43491 1005 aaKnown RBP18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 PRC1O43663 620 aa18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 DSG3P32926 999 aa18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 SLC1A4P43007 532 aa18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 FAM110CQ1W6H9 321 aa18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 TSGA10IPQ3SY00 556 aa18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 IFIT1BQ5T764 474 aaKnown RBP18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 ATG4CQ96DT6 458 aa18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 KAT14Q9H8E8 782 aa18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 GPHNQ9NQX3 736 aaPredicted RBP18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 RBPJLQ9UBG7 517 aa18.21■□□□□ 0.51
LYSMD2-204ENST00000560491 CNMDO75829 334 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 PDHBP11177 359 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 CTGFP29279 349 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 MCM5P33992 734 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 LACTBP83111 547 aaPredicted RBP18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 KRT32Q14532 448 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 CCDC96Q2M329 555 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 TMEM67Q5HYA8 995 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 DCAF4Q8WV16 495 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 TCEANC2Q96MN5 208 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 JAKMIP1Q96N16 626 aaKnown RBP18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 SLF1Q9BQI6 1058 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 LRRC2Q9BYS8 371 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 BTBD7Q9P203 1132 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 PPP1R9AQ9ULJ8 1098 aa18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 FRMPD2Q68DX3 1309 aaPredicted RBP18.2■□□□□ 0.5
LYSMD2-204ENST00000560491 ERICH2A1L162 156 aa18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 TMEM232C9JQI7 657 aa18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 WTAPQ15007 396 aa18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 SART3Q15020 963 aaKnown RBP18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 LBX2Q6XYB7 198 aa18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 IGDCC4Q8TDY8 1250 aa18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 GTF3C2Q8WUA4 911 aaPredicted RBP18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 ERO1AQ96HE7 468 aa18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 HOXC10Q9NYD6 342 aa18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 MORF4L1Q9UBU8 362 aa18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 MYPNQ86TC9 1320 aa18.19■□□□□ 0.5
LYSMD2-204ENST00000560491 SH2B2O14492 632 aaPredicted RBP18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 SNHG28P0DPA3 235 aa18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 CPA1P15085 419 aa18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 ERVK-9P63128 1117 aa18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 ERVK-24P63145 666 aa18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 Q3C1V9 767 aa18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 TTBK2Q6IQ55 1244 aa18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 KIFC2Q96AC6 838 aa18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 LY9Q9HBG7 655 aa18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 GPCPD1Q9NPB8 672 aa18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 RABGAP1Q9Y3P9 1069 aa18.18■□□□□ 0.5
LYSMD2-204ENST00000560491 GOLGA8HP0CJ92 632 aa18.17■□□□□ 0.5
LYSMD2-204ENST00000560491 STAT2P52630 851 aa18.17■□□□□ 0.5
LYSMD2-204ENST00000560491 IKQ13123 557 aaPredicted RBP18.17■□□□□ 0.5
LYSMD2-204ENST00000560491 COL13A1Q5TAT6 717 aaPredicted RBP18.17■□□□□ 0.5
LYSMD2-204ENST00000560491 GPRC5AQ8NFJ5 357 aa18.17■□□□□ 0.5
LYSMD2-204ENST00000560491 TRIM47Q96LD4 638 aa18.17■□□□□ 0.5
LYSMD2-204ENST00000560491 FEM1BQ9UK73 627 aa18.17■□□□□ 0.5
LYSMD2-204ENST00000560491 ADAMTS5Q9UNA0 930 aa18.17■□□□□ 0.5
LYSMD2-204ENST00000560491 VWA5AO00534 786 aa18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 SLC16A2P36021 539 aa18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 PSMC4P43686 418 aa18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 EXOSC10Q01780 885 aaKnown RBP18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 ZNF543Q08ER8 600 aa18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 KIF22Q14807 665 aa18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 TMEM132BQ14DG7 1078 aa18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 DHX32Q7L7V1 743 aaKnown RBP18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 PRPF38AQ8NAV1 312 aaKnown RBP18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 REPS2Q8NFH8 660 aa18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 TMEM87BQ96K49 555 aa18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 PORCNQ9H237 461 aa18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 TRIM17Q9Y577 477 aa18.16■□□□□ 0.5
LYSMD2-204ENST00000560491 DOCK3Q8IZD9 2030 aa18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 FCGRTP55899 365 aa18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 PLS1Q14651 629 aa18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 BLOC1S2Q6QNY1 142 aa18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 OTOP1Q7RTM1 612 aa18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 CTU1Q7Z7A3 348 aaKnown RBP18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 FAM160B2Q86V87 743 aa18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 MB21D1Q8N884 522 aa18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 MTA3Q9BTC8 594 aa18.15■□□□□ 0.5
LYSMD2-204ENST00000560491 CPVLQ9H3G5 476 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms