RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 NUP62CLQ9H1M0 184 aa12.52□□□□□ -0.4
SNRPA1-211ENST00000560433 PSME4Q14997 1843 aa12.52□□□□□ -0.4
SNRPA1-211ENST00000560433 MYO3BQ8WXR4 1341 aa12.52□□□□□ -0.4
SNRPA1-211ENST00000560433 EEF2P13639 858 aaKnown RBP12.52□□□□□ -0.41
SNRPA1-211ENST00000560433 NDUFA8P51970 172 aa12.52□□□□□ -0.41
SNRPA1-211ENST00000560433 PTPAQ15257 358 aa12.52□□□□□ -0.41
SNRPA1-211ENST00000560433 PIGSQ96S52 555 aa12.52□□□□□ -0.41
SNRPA1-211ENST00000560433 FOXP1Q9H334 677 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-211ENST00000560433 TMOD2Q9NZR1 351 aa12.52□□□□□ -0.41
SNRPA1-211ENST00000560433 GH2P01242 217 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 SNW1Q13573 536 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 SLC39A14Q15043 492 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 ATL3Q6DD88 541 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 PIK3AP1Q6ZUJ8 805 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 EHD4Q9H223 541 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 TNMDQ9H2S6 317 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 MYOZ2Q9NPC6 264 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 YEATS4O95619 227 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 TBC1D10BQ4KMP7 808 aaPredicted RBP12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 ADALQ6DHV7 355 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 KCNG4Q8TDN1 519 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 CNTNAP1P78357 1384 aa12.51□□□□□ -0.41
SNRPA1-211ENST00000560433 NOVP48745 357 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 CCDC96Q2M329 555 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 AXDND1Q5T1B0 1012 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 TATDN1Q6P1N9 297 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 CCDC84Q86UT8 332 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 SIAH1Q8IUQ4 282 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 AGBL3Q8NEM8 1001 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 NUP88Q99567 741 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 FHDC1Q9C0D6 1143 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 MYH4Q9Y623 1939 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 ENTPD3O75355 529 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 ZNF174Q15697 407 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 ABCB5Q2M3G0 1257 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 SPDYE2Q495Y8 402 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 ARHGAP27Q6ZUM4 889 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 FOXP4Q8IVH2 680 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 SPICE1Q8N0Z3 855 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 COA7Q96BR5 231 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 PLIN4Q96Q06 1357 aa12.5□□□□□ -0.41
SNRPA1-211ENST00000560433 PRKCSHP14314 528 aaPredicted RBP12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 GMPSP49915 693 aaPredicted RBP12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 GNAQP50148 359 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 SNAP25P60880 206 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 ICA1Q05084 483 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 CCDC73Q6ZRK6 1079 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 MICALL2Q8IY33 904 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 MRPS27Q92552 414 aaKnown RBP12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 VPS33BQ9H267 617 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 ZNF541Q9H0D2 1346 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 STXBP3O00186 592 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 ECE1P42892 770 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 MAP3K11Q16584 847 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 PRAMEF18Q5VWM3 479 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 SHC4Q6S5L8 630 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 ENGASEQ8NFI3 743 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 CLSTN2Q9H4D0 955 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 FZD1Q9UP38 647 aa12.49□□□□□ -0.41
SNRPA1-211ENST00000560433 NAPAP54920 295 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 ZYXQ15942 572 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 RILPL1Q5EBL4 403 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 FAM151AQ8WW52 585 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 TNFRSF25Q93038 417 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 CCDC17Q96LX7 622 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 SPON1Q9HCB6 807 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 BRMS1Q9HCU9 246 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 CNOT7Q9UIV1 285 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 A0A1W2PRG0 241 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 MYO1BO43795 1136 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 PFKFB1P16118 471 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 TAL1P17542 331 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 NT5C2P49902 561 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 FAM160A1Q05DH4 1040 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 TNIP1Q15025 636 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 ADGRF4Q8IZF3 695 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 BLIDQ8IZY5 108 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 FMR1NBQ8N0W7 255 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 RRP36Q96EU6 259 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 FUCA2Q9BTY2 467 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 DDX19AQ9NUU7 478 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 BARHL2Q9NY43 387 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 SEC63Q9UGP8 760 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
SNRPA1-211ENST00000560433 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 MCM7P33993 719 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 SLC1A4P43007 532 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 ZNF543Q08ER8 600 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 SAMD1Q6SPF0 538 aaPredicted RBP12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 SPZ1Q9BXG8 430 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 SMCO2A6NFE2 343 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 KINO60870 393 aaKnown RBP12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 SNHG28P0DPA3 235 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 RASA3Q14644 834 aa12.47□□□□□ -0.41
SNRPA1-211ENST00000560433 SLFN13Q68D06 897 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms