RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 RRP36Q96EU6 259 aaKnown RBP16.66■□□□□ 0.26
ZEB1-218ENST00000560196 PGBD1Q96JS3 809 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 TMEM39BQ9GZU3 492 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 GINM1Q9NU53 330 aa16.66■□□□□ 0.26
ZEB1-218ENST00000560196 SBF1O95248 1867 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 EGFRP00533 1210 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 GH2P01242 217 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 GOLGA8HP0CJ92 632 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 RASA3Q14644 834 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 RRP1BQ14684 758 aaKnown RBP16.65■□□□□ 0.26
ZEB1-218ENST00000560196 SLC39A14Q15043 492 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 STK38Q15208 465 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 ZSCAN23Q3MJ62 389 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 CCDC183Q5T5S1 534 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 ILDR2Q71H61 639 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 TNFRSF25Q93038 417 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 TEPSINQ96N21 525 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 FTOQ9C0B1 505 aaKnown RBP eCLIP16.65■□□□□ 0.26
ZEB1-218ENST00000560196 BARHL2Q9NY43 387 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 GPRC5DQ9NZD1 345 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 CLIC4Q9Y696 253 aa16.65■□□□□ 0.26
ZEB1-218ENST00000560196 A0A1W2PQ27 194 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 A0A1W2PQ64 194 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 A0A1W2PQD8 194 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 FSD2A1L4K1 749 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 STXBP3O00186 592 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 SPTLC2O15270 562 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 PPP6R2O75170 966 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 LETM1O95202 739 aaPredicted RBP16.64■□□□□ 0.25
ZEB1-218ENST00000560196 GDF11O95390 407 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 NLRP5P59047 1200 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 SAMD7Q7Z3H4 446 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 OXER1Q8TDS5 423 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 CCDC12Q8WUD4 166 aaPredicted RBP16.64■□□□□ 0.25
ZEB1-218ENST00000560196 MTMR8Q96EF0 704 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 GMCL1Q96IK5 515 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 MTMR7Q9Y216 660 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 MYH4Q9Y623 1939 aa16.64■□□□□ 0.25
ZEB1-218ENST00000560196 ESYT2A0FGR8 921 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 JAG1P78504 1218 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 CEBPZQ03701 1054 aaKnown RBP16.63■□□□□ 0.25
ZEB1-218ENST00000560196 NR5A1Q13285 461 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 PTPAQ15257 358 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 SHROOM1Q2M3G4 852 aaPredicted RBP16.63■□□□□ 0.25
ZEB1-218ENST00000560196 TBC1D10BQ4KMP7 808 aaPredicted RBP16.63■□□□□ 0.25
ZEB1-218ENST00000560196 SLFN13Q68D06 897 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 WWC2Q6AWC2 1192 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 ADALQ6DHV7 355 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
ZEB1-218ENST00000560196 JMYQ8N9B5 988 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.63■□□□□ 0.25
ZEB1-218ENST00000560196 SEC63Q9UGP8 760 aaKnown RBP16.63■□□□□ 0.25
ZEB1-218ENST00000560196 HACL1Q9UJ83 578 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 ZBTB21Q9ULJ3 1066 aa16.63■□□□□ 0.25
ZEB1-218ENST00000560196 VEGFAP15692 232 aaPredicted RBP16.62■□□□□ 0.25
ZEB1-218ENST00000560196 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
ZEB1-218ENST00000560196 CAP2P40123 477 aa16.62■□□□□ 0.25
ZEB1-218ENST00000560196 TRAPPC10P48553 1259 aa16.62■□□□□ 0.25
ZEB1-218ENST00000560196 TOB1P50616 345 aaPredicted RBP16.62■□□□□ 0.25
ZEB1-218ENST00000560196 SF3A1Q15459 793 aaKnown RBP16.62■□□□□ 0.25
ZEB1-218ENST00000560196 BLIDQ8IZY5 108 aa16.62■□□□□ 0.25
ZEB1-218ENST00000560196 HOOK2Q96ED9 719 aa16.62■□□□□ 0.25
ZEB1-218ENST00000560196 DDX19AQ9NUU7 478 aaKnown RBP16.62■□□□□ 0.25
ZEB1-218ENST00000560196 PCDHA7Q9UN72 937 aa16.62■□□□□ 0.25
ZEB1-218ENST00000560196 PCDHA4Q9UN74 947 aa16.62■□□□□ 0.25
ZEB1-218ENST00000560196 PPP2R3BQ9Y5P8 575 aa16.62■□□□□ 0.25
ZEB1-218ENST00000560196 FRMPD2Q68DX3 1309 aaPredicted RBP16.62■□□□□ 0.25
ZEB1-218ENST00000560196 M0R2N6 131 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 BMP15O95972 392 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 LIG1P18858 919 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 SLC1A4P43007 532 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 ME1P48163 572 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 CCDC96Q2M329 555 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 PPP1R18Q6NYC8 613 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 HEATR3Q7Z4Q2 680 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 CDAN1Q8IWY9 1227 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 BICD2Q8TD16 824 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 PIBF1Q8WXW3 757 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 GPKOWQ92917 476 aaPredicted RBP eCLIP16.61■□□□□ 0.25
ZEB1-218ENST00000560196 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 ZMYND12Q9H0C1 365 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 GPCPD1Q9NPB8 672 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 NOL7Q9UMY1 257 aaKnown RBP16.61■□□□□ 0.25
ZEB1-218ENST00000560196 CEP131Q9UPN4 1083 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 TMX2Q9Y320 296 aa16.61■□□□□ 0.25
ZEB1-218ENST00000560196 PNMA6FA0A0J9YX94 578 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 GOLGA6L3A6NEY3 463 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 PHF20L1A8MW92 1017 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 F5H6K3 240 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 ASNSP08243 561 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 KLRC3Q07444 240 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 AXDND1Q5T1B0 1012 aaPredicted RBP16.6■□□□□ 0.25
ZEB1-218ENST00000560196 TYW1BQ6NUM6 668 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 BTNL9Q6UXG8 535 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 ADGRF4Q8IZF3 695 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 PIGSQ96S52 555 aa16.6■□□□□ 0.25
ZEB1-218ENST00000560196 DEFB129Q9H1M3 183 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms