RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 NDUFB10O96000 172 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 GJB1P08034 283 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 HOXC6P09630 235 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 ELNP15502 786 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 CAPN2P17655 700 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 PTPREP23469 700 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 NT5C2P49902 561 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 UBXN2AP68543 259 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 ATP2B2Q01814 1243 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 REPS2Q8NFH8 660 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 STAG1Q8WVM7 1258 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 ATG4CQ96DT6 458 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 MOV10L1Q9BXT6 1211 aaKnown RBP15.67■□□□□ 0.1
SMAD3-213ENST00000560175 SPATC1LQ9H0A9 340 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 IL25Q9H293 177 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 FBXO28Q9NVF7 368 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 PPP1R9AQ9ULJ8 1098 aa15.67■□□□□ 0.1
SMAD3-213ENST00000560175 ZNF236Q9UL36 1845 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 SLC15A5A6NIM6 579 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 VWA5AO00534 786 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 STRNO43815 780 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 CCL5P13501 91 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 EN2P19622 333 aaPredicted RBP15.66■□□□□ 0.1
SMAD3-213ENST00000560175 CHMLP26374 656 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 GRB14Q14449 540 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 TMEM132BQ14DG7 1078 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 FAM83BQ5T0W9 1011 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 AKNAD1Q5T1N1 836 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 MAP3K21Q5TCX8 1036 aa15.66■□□□□ 0.1
SMAD3-213ENST00000560175 CENPQQ7L2Z9 268 aaPredicted RBP15.66■□□□□ 0.1
SMAD3-213ENST00000560175 PAK6Q9NQU5 681 aaPredicted RBP15.66■□□□□ 0.1
SMAD3-213ENST00000560175 TSPY2A6NKD2 308 aa15.65■□□□□ 0.1
SMAD3-213ENST00000560175 ATP2A1O14983 1001 aa15.65■□□□□ 0.1
SMAD3-213ENST00000560175 PLA2G6O60733 806 aa15.65■□□□□ 0.1
SMAD3-213ENST00000560175 INHAP05111 366 aa15.65■□□□□ 0.1
SMAD3-213ENST00000560175 GJA8P48165 433 aa15.65■□□□□ 0.1
SMAD3-213ENST00000560175 MAP2K5Q13163 448 aa15.65■□□□□ 0.1
SMAD3-213ENST00000560175 TRMT44Q8IYL2 757 aaKnown RBP15.65■□□□□ 0.1
SMAD3-213ENST00000560175 PRPF38AQ8NAV1 312 aaKnown RBP15.65■□□□□ 0.1
SMAD3-213ENST00000560175 GMCL1Q96IK5 515 aa15.65■□□□□ 0.1
SMAD3-213ENST00000560175 ZNF214Q9UL59 606 aaPredicted RBP15.65■□□□□ 0.1
SMAD3-213ENST00000560175 RAD50Q92878 1312 aa15.65■□□□□ 0.1
SMAD3-213ENST00000560175 ZNF213O14771 459 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 RANBP6O60518 1105 aaKnown RBP15.64■□□□□ 0.09
SMAD3-213ENST00000560175 HMGCRP04035 888 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 RGS2P41220 211 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 RIOX2Q8IUF8 465 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 TBC1D10CQ8IV04 446 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 ABRAQ8N0Z2 381 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 NKX2-3Q8TAU0 364 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 TRIB2Q92519 343 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 TTC14Q96N46 770 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 NUP88Q99567 741 aaPredicted RBP15.64■□□□□ 0.09
SMAD3-213ENST00000560175 SLF1Q9BQI6 1058 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 UNC93B1Q9H1C4 597 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 MROH8Q9H579 483 aa15.64■□□□□ 0.09
SMAD3-213ENST00000560175 NMT2O60551 498 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 SGPL1O95470 568 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 SLC25A27O95847 323 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 ERCC3P19447 782 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 CYP2B6P20813 491 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 HAND2P61296 217 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 SLFN13Q68D06 897 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 RCSD1Q6JBY9 416 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 MFSD6Q6ZSS7 791 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 UBE2Q1Q7Z7E8 422 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 CCAR1Q8IX12 1150 aaKnown RBP15.63■□□□□ 0.09
SMAD3-213ENST00000560175 LRRC47Q8N1G4 583 aaKnown RBP15.63■□□□□ 0.09
SMAD3-213ENST00000560175 SHISA4Q96DD7 197 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 CRISPLD2Q9H0B8 497 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 RNF208Q9H0X6 261 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 RNF41Q9H4P4 317 aaPredicted RBP15.63■□□□□ 0.09
SMAD3-213ENST00000560175 BIN2Q9UBW5 565 aaPredicted RBP15.63■□□□□ 0.09
SMAD3-213ENST00000560175 FEM1BQ9UK73 627 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 RPTORQ8N122 1335 aa15.63■□□□□ 0.09
SMAD3-213ENST00000560175 SGSM2O43147 1006 aa15.62■□□□□ 0.09
SMAD3-213ENST00000560175 FDX1P10109 184 aa15.62■□□□□ 0.09
SMAD3-213ENST00000560175 BMP3P12645 472 aa15.62■□□□□ 0.09
SMAD3-213ENST00000560175 STAT3P40763 770 aa15.62■□□□□ 0.09
SMAD3-213ENST00000560175 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMAD3-213ENST00000560175 RUFY2Q8WXA3 655 aa15.62■□□□□ 0.09
SMAD3-213ENST00000560175 ANKS1AQ92625 1134 aa15.62■□□□□ 0.09
SMAD3-213ENST00000560175 APBA2Q99767 749 aa15.62■□□□□ 0.09
SMAD3-213ENST00000560175 CTNNA3Q9UI47 895 aa15.62■□□□□ 0.09
SMAD3-213ENST00000560175 TRIM32Q13049 653 aa15.61■□□□□ 0.09
SMAD3-213ENST00000560175 NPLOC4Q8TAT6 608 aa15.61■□□□□ 0.09
SMAD3-213ENST00000560175 U2AF1L4Q8WU68 220 aaKnown RBP15.61■□□□□ 0.09
SMAD3-213ENST00000560175 SLC38A10Q9HBR0 1119 aa15.61■□□□□ 0.09
SMAD3-213ENST00000560175 STX8Q9UNK0 236 aa15.61■□□□□ 0.09
SMAD3-213ENST00000560175 IVNS1ABPQ9Y6Y0 642 aa15.61■□□□□ 0.09
SMAD3-213ENST00000560175 MYCP01106 439 aaPredicted RBP15.6■□□□□ 0.09
SMAD3-213ENST00000560175 TOP1P11387 765 aaKnown RBP15.6■□□□□ 0.09
SMAD3-213ENST00000560175 COPB2P35606 906 aa15.6■□□□□ 0.09
SMAD3-213ENST00000560175 OAZ1P54368 228 aa15.6■□□□□ 0.09
SMAD3-213ENST00000560175 CACNB2Q08289 660 aaPredicted RBP15.6■□□□□ 0.09
SMAD3-213ENST00000560175 CCL14Q16627 93 aa15.6■□□□□ 0.09
SMAD3-213ENST00000560175 IMMTQ16891 758 aaKnown RBP15.6■□□□□ 0.09
SMAD3-213ENST00000560175 CHURC1Q8WUH1 139 aa15.6■□□□□ 0.09
SMAD3-213ENST00000560175 ESR2Q92731 530 aa15.6■□□□□ 0.09
SMAD3-213ENST00000560175 TMEM47Q9BQJ4 181 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms