RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 CHRNA5P30532 468 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 ST5P78524 1137 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 MTMR3Q13615 1198 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 LRP8Q14114 963 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 C8orf34Q49A92 452 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 CRY2Q49AN0 593 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 EFHC2Q5JST6 749 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 SYNE4Q8N205 404 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 RUBCNLQ9H714 662 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 ARHGEF10LQ9HCE6 1279 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 ECHDC1Q9NTX5 307 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 CHMP3Q9Y3E7 222 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 RIPOR2Q9Y4F9 1068 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 ZNF609O15014 1411 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 ARFGEF1Q9Y6D6 1849 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 ANKRD33BA6NCL7 494 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 TMEM229AB2RXF0 380 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 POLRMTO00411 1230 aaKnown RBP7.53□□□□□ -1.2
CLPX-206ENST00000560166 SMARCA5O60264 1052 aaPredicted RBP7.53□□□□□ -1.2
CLPX-206ENST00000560166 LMNB1P20700 586 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 MSX1P28360 303 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 IGHMBP2P38935 993 aaKnown RBP7.53□□□□□ -1.2
CLPX-206ENST00000560166 PHKA2P46019 1235 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 CENPCQ03188 943 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 TNNI3KQ59H18 835 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 PRR5LQ6MZQ0 368 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 LDHAL6AQ6ZMR3 332 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 TMC4Q7Z404 712 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 AACSQ86V21 672 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 SKAP1Q86WV1 359 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 VGLL2Q8N8G2 317 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 PI4K2BQ8TCG2 481 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.53□□□□□ -1.2
CLPX-206ENST00000560166 EAF2Q96CJ1 260 aaPredicted RBP7.53□□□□□ -1.2
CLPX-206ENST00000560166 ZNF512BQ96KM6 892 aaPredicted RBP7.53□□□□□ -1.2
CLPX-206ENST00000560166 ESYT1Q9BSJ8 1104 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 SIL1Q9H173 461 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 IL1RAPL2Q9NP60 686 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 BSDC1Q9NW68 430 aaPredicted RBP7.53□□□□□ -1.2
CLPX-206ENST00000560166 KLF15Q9UIH9 416 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 HRH3Q9Y5N1 445 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 FPGT-TNNI3KV9GXZ4 949 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 RFX7Q2KHR2 1363 aa7.53□□□□□ -1.2
CLPX-206ENST00000560166 EPB41L2O43491 1005 aaKnown RBP7.52□□□□□ -1.21
CLPX-206ENST00000560166 CDC45O75419 566 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 SERPINB2P05120 415 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 GSPT1P15170 499 aaKnown RBP7.52□□□□□ -1.21
CLPX-206ENST00000560166 ATP5JP18859 108 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 HOXA10P31260 410 aaPredicted RBP7.52□□□□□ -1.21
CLPX-206ENST00000560166 RGS19P49795 217 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 DDR1Q08345 913 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 TFCP2Q12800 502 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 NAA30Q147X3 362 aaPredicted RBP7.52□□□□□ -1.21
CLPX-206ENST00000560166 PUM3Q15397 648 aaKnown RBP7.52□□□□□ -1.21
CLPX-206ENST00000560166 CASC1Q6TDU7 716 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 BICDL1Q6ZP65 573 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 ANKRD18AQ8IVF6 992 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 KLHDC4Q8TBB5 520 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 OTUD7AQ8TE49 926 aaPredicted RBP7.52□□□□□ -1.21
CLPX-206ENST00000560166 MPHOSPH8Q99549 860 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 BRIP1Q9BX63 1249 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 CNNM1Q9NRU3 951 aa7.52□□□□□ -1.21
CLPX-206ENST00000560166 BRCA1P38398 1863 aaKnown RBP7.51□□□□□ -1.21
CLPX-206ENST00000560166 NPHP1O15259 732 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 HYAL3O43820 417 aaPredicted RBP7.51□□□□□ -1.21
CLPX-206ENST00000560166 C21orf2O43822 256 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 IGSF3O75054 1194 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 PDE8BO95263 885 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 FGFR2P21802 821 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 MAPK1P28482 360 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 SCNN1DP51172 638 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 GDF10P55107 478 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 MAP2K1Q02750 393 aaPredicted RBP7.51□□□□□ -1.21
CLPX-206ENST00000560166 FKBP4Q02790 459 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLPX-206ENST00000560166 GRM1Q13255 1194 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 LRRC24Q50LG9 513 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 METTL24Q5JXM2 366 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 LCE1DQ5T752 114 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 DDX46Q7L014 1031 aaKnown RBP7.51□□□□□ -1.21
CLPX-206ENST00000560166 SCG3Q8WXD2 468 aaKnown RBP7.51□□□□□ -1.21
CLPX-206ENST00000560166 LPIN2Q92539 896 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 CNKSR1Q969H4 720 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 CRAMP1Q96RY5 1269 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 ANKRD2Q9GZV1 360 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 CRISPLD1Q9H336 500 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 AVENQ9NQS1 362 aaPredicted RBP7.51□□□□□ -1.21
CLPX-206ENST00000560166 SERTAD1Q9UHV2 236 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 DBNLQ9UJU6 430 aaKnown RBP7.51□□□□□ -1.21
CLPX-206ENST00000560166 DDX60Q8IY21 1712 aaKnown RBP7.51□□□□□ -1.21
CLPX-206ENST00000560166 NRXN2Q9P2S2 1712 aa7.51□□□□□ -1.21
CLPX-206ENST00000560166 SBF1O95248 1867 aa7.5□□□□□ -1.21
CLPX-206ENST00000560166 A0A1B0GUL7 405 aa7.5□□□□□ -1.21
CLPX-206ENST00000560166 FAM177BA6PVY3 158 aa7.5□□□□□ -1.21
CLPX-206ENST00000560166 HIP1O00291 1037 aa7.5□□□□□ -1.21
CLPX-206ENST00000560166 BACH1O14867 736 aa7.5□□□□□ -1.21
CLPX-206ENST00000560166 GNRH1P01148 92 aa7.5□□□□□ -1.21
CLPX-206ENST00000560166 IL2RAP01589 272 aa7.5□□□□□ -1.21
CLPX-206ENST00000560166 SDSP20132 328 aa7.5□□□□□ -1.21
CLPX-206ENST00000560166 IGFBP4P22692 258 aa7.5□□□□□ -1.21
CLPX-206ENST00000560166 ADH6P28332 368 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms