RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 MAD2L2Q9UI95 211 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 PCDHA4Q9UN74 947 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 TNS1Q9HBL0 1735 aaKnown RBP9.21□□□□□ -0.94
SMAD3-212ENST00000559937 MYO3BQ8WXR4 1341 aa9.21□□□□□ -0.94
SMAD3-212ENST00000559937 ARFGEF1Q9Y6D6 1849 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 PALM3A6NDB9 673 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-212ENST00000559937 hCG_1984214I3L0E3 225 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 M0R2N6 131 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 LAD1O00515 517 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 RIOK3O14730 519 aaKnown RBP9.2□□□□□ -0.94
SMAD3-212ENST00000559937 PLSCR1O15162 318 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 FOXN1O15353 648 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 NMT2O60551 498 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 SERPINC1P01008 464 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 PRR29P0C7W0 189 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 TXLNAP40222 546 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 BTDP43251 543 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 NOVP48745 357 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 EVX2Q03828 476 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 DPYDQ12882 1025 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 PTGDRQ13258 359 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 PTPN14Q15678 1187 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 EARS2Q5JPH6 523 aaKnown RBP9.2□□□□□ -0.94
SMAD3-212ENST00000559937 SPECC1Q5M775 1068 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 ARMCX5Q6P1M9 558 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 SP8Q8IXZ3 490 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 TEX11Q8IYF3 940 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 ZNF713Q8N859 430 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-212ENST00000559937 IQUBQ8NA54 791 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 CCDC12Q8WUD4 166 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-212ENST00000559937 TGFBRAP1Q8WUH2 860 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 SYMPKQ92797 1274 aaKnown RBP9.2□□□□□ -0.94
SMAD3-212ENST00000559937 COA1Q9GZY4 146 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 FANCLQ9NW38 375 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
SMAD3-212ENST00000559937 PSME4Q14997 1843 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 POLRMTO00411 1230 aaKnown RBP9.19□□□□□ -0.94
SMAD3-212ENST00000559937 GTPBP6O43824 516 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-212ENST00000559937 MYL1P05976 194 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 TOP1P11387 765 aaKnown RBP9.19□□□□□ -0.94
SMAD3-212ENST00000559937 ATP1A3P13637 1013 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 ATP2B1P20020 1258 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 PRPHP41219 470 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 CDK8P49336 464 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 RHBDL3P58872 404 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 TBX2Q13207 712 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-212ENST00000559937 ARID5BQ14865 1188 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 DIXDC1Q155Q3 683 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 ZNF174Q15697 407 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 E2F4Q16254 413 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 CFAP100Q494V2 611 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 SPATA1Q5VX52 437 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 CEP135Q66GS9 1140 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 ISM2Q6H9L7 571 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 USP49Q70CQ1 688 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 PDILTQ8N807 584 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 C4orf32Q8N8J7 132 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 TBC1D16Q8TBP0 767 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 DHX58Q96C10 678 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 DYNLL2Q96FJ2 89 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 PAGE5Q96GU1 130 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 C16orf45Q96MC5 204 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-212ENST00000559937 TMEM47Q9BQJ4 181 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 GTPBP4Q9BZE4 634 aaKnown RBP9.19□□□□□ -0.94
SMAD3-212ENST00000559937 TMX1Q9H3N1 280 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 RMND1Q9NWS8 449 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 BARHL2Q9NY43 387 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 NFE2L3Q9Y4A8 694 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 FLT1P17948 1338 aa9.19□□□□□ -0.94
SMAD3-212ENST00000559937 A0A087X0B3 334 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 CCDC194A0A1B0GVG4 234 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 hCG_1642624A0A1W2PR95 340 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 ESYT2A0FGR8 921 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 VWA3AA6NCI4 1184 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 STXBP3O00186 592 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 DDR1Q08345 913 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 CUL4BQ13620 913 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 GRIK5Q16478 980 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 PPP4R3BQ5MIZ7 849 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 MFSD14BQ5SR56 506 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 PIK3AP1Q6ZUJ8 805 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 KRT25Q7Z3Z0 450 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 MAPKAPK5Q8IW41 473 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 EPSTI1Q96J88 318 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 CTAGE1Q96RT6 745 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 EYA3Q99504 573 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 CUEDC2Q9H467 287 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 MAGEF1Q9HAY2 307 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 SYNRGQ9UMZ2 1314 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 JAG2Q9Y219 1238 aa9.18□□□□□ -0.94
SMAD3-212ENST00000559937 SIPA1L1O43166 1804 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 ADAMTSL1Q8N6G6 1762 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 A0A1B0GTH6 734 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 USP17L3A6NCW0 530 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 USP17L4A6NCW7 530 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 GOLGA6L9A6NEM1 432 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 KLRF2D3W0D1 207 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 WNT7AO00755 349 aa9.17□□□□□ -0.94
SMAD3-212ENST00000559937 PPEF1O14829 653 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-212ENST00000559937 ARHGAP6O43182 974 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms