RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 GMLQ99445 158 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 RIOK1Q9BRS2 568 aaKnown RBP6.25□□□□□ -1.41
SPG11-220ENST00000559933 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.25□□□□□ -1.41
SPG11-220ENST00000559933 DDX4Q9NQI0 724 aaKnown RBP6.25□□□□□ -1.41
SPG11-220ENST00000559933 DOLKQ9UPQ8 538 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 TACC3Q9Y6A5 838 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 LAMB1P07942 1786 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 CEP350Q5VT06 3117 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 ECM29Q5VYK3 1845 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 RAD50Q92878 1312 aa6.25□□□□□ -1.41
SPG11-220ENST00000559933 CYP2D7A0A087X1C5 515 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 CLRN2A0PK11 232 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 HIP1O00291 1037 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 HSPD1P10809 573 aaKnown RBP6.24□□□□□ -1.41
SPG11-220ENST00000559933 RHOQP17081 205 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 EPS15P42566 896 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 SCTRP47872 440 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 RBM5P52756 815 aaKnown RBP eCLIP6.24□□□□□ -1.41
SPG11-220ENST00000559933 EIF6P56537 245 aaKnown RBP6.24□□□□□ -1.41
SPG11-220ENST00000559933 RHBDL3P58872 404 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 HAND2P61296 217 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 VAC14Q08AM6 782 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 NFIAQ12857 509 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 USP4Q13107 963 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 SEMA3FQ13275 785 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 CLN3Q13286 438 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 PICALMQ13492 652 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 CFAP100Q494V2 611 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 ZSCAN25Q6NSZ9 544 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 FOXR1Q6PIV2 292 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 RNF135Q8IUD6 432 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 MAPKAPK5Q8IW41 473 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 TRPM4Q8TD43 1214 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 TBC1D22AQ8WUA7 517 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 AIDAQ96BJ3 306 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 CNTNAP3BQ96NU0 1288 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 STRBPQ96SI9 672 aaKnown RBP6.24□□□□□ -1.41
SPG11-220ENST00000559933 CNTNAP3Q9BZ76 1288 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 TDRD3Q9H7E2 651 aaKnown RBP6.24□□□□□ -1.41
SPG11-220ENST00000559933 ARHGEF10LQ9HCE6 1279 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 INCENPQ9NQS7 918 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 HELLSQ9NRZ9 838 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 SAP30BPQ9UHR5 308 aaKnown RBP6.24□□□□□ -1.41
SPG11-220ENST00000559933 RBM8AQ9Y5S9 174 aaKnown RBP6.24□□□□□ -1.41
SPG11-220ENST00000559933 SLC4A4Q9Y6R1 1079 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 LAMA4Q16363 1823 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 FOCADQ5VW36 1801 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 GAKO14976 1311 aa6.24□□□□□ -1.41
SPG11-220ENST00000559933 SIPA1L1O43166 1804 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 GSG1L2A8MUP6 293 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 RAD21O60216 631 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 GNRH1P01148 92 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 APPP05067 770 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 ZFYP08048 801 aaPredicted RBP6.23□□□□□ -1.41
SPG11-220ENST00000559933 CPA1P15085 419 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 NBPF9Q3BBW0 867 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 TBC1D10BQ4KMP7 808 aaPredicted RBP6.23□□□□□ -1.41
SPG11-220ENST00000559933 SPTY2D1Q68D10 685 aaPredicted RBP6.23□□□□□ -1.41
SPG11-220ENST00000559933 APOBEC3HQ6NTF7 200 aaKnown RBP6.23□□□□□ -1.41
SPG11-220ENST00000559933 CDC42EP5Q6NZY7 148 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 DLK2Q6UY11 383 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 RIPOR1Q6ZS17 1223 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 STOX1Q6ZVD7 989 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 TBC1D10CQ8IV04 446 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 ZFPM1Q8IX07 1006 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 TEX11Q8IYF3 940 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 ZGPATQ8N5A5 531 aaKnown RBP6.23□□□□□ -1.41
SPG11-220ENST00000559933 ZNF526Q8TF50 670 aaPredicted RBP6.23□□□□□ -1.41
SPG11-220ENST00000559933 RUFY2Q8WXA3 655 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 TEKT1Q969V4 418 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 PRMT6Q96LA8 375 aaPredicted RBP6.23□□□□□ -1.41
SPG11-220ENST00000559933 TBC1D32Q96NH3 1257 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 COL25A1Q9BXS0 654 aaPredicted RBP6.23□□□□□ -1.41
SPG11-220ENST00000559933 USP26Q9BXU7 913 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 VPS33BQ9H267 617 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 FLT1P17948 1338 aa6.23□□□□□ -1.41
SPG11-220ENST00000559933 GPR75-ASB3A0A0A6YYF3 556 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 FAM196BA6NMK8 535 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 TCP10L2B9ZVM9 353 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 SLC27A2O14975 620 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 WDHD1O75717 1129 aaPredicted RBP6.22□□□□□ -1.41
SPG11-220ENST00000559933 CYP21A2P08686 494 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 SOX11P35716 441 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 TDO2P48775 406 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 FKBP1AP62942 108 aaKnown RBP6.22□□□□□ -1.41
SPG11-220ENST00000559933 GSTO1P78417 241 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 TCP10Q12799 353 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 IRF5Q13568 498 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 MCM6Q14566 821 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 TNIP1Q15025 636 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 KIF4BQ2VIQ3 1234 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 ADCK5Q3MIX3 580 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 CREB3L3Q68CJ9 461 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 IFNL3Q8IZI9 196 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 AGBL3Q8NEM8 1001 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 TGFBRAP1Q8WUH2 860 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 TCEANC2Q96MN5 208 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 ZDHHC15Q96MV8 337 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 C22orf23Q9BZE7 217 aa6.22□□□□□ -1.41
SPG11-220ENST00000559933 MYOZ2Q9NPC6 264 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms