RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 GNG11P61952 73 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 CDKAL1Q5VV42 579 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 PDXDC2PQ6P474 469 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 IGSF22Q8N9C0 903 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 PNMA1Q8ND90 353 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 CARD6Q9BX69 1037 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 MRPL44Q9H9J2 332 aaKnown RBP11.4□□□□□ -0.58
LRRC28-216ENST00000559819 ANKIB1Q9P2G1 1089 aa11.4□□□□□ -0.58
LRRC28-216ENST00000559819 SAP30BPQ9UHR5 308 aaKnown RBP11.4□□□□□ -0.58
LRRC28-216ENST00000559819 PDS5AQ29RF7 1337 aaKnown RBP11.4□□□□□ -0.59
LRRC28-216ENST00000559819 AKR1B15C9JRZ8 316 aaPredicted RBP11.39□□□□□ -0.59
LRRC28-216ENST00000559819 STX10O60499 249 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 NFIXQ14938 502 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 ARHGAP29Q52LW3 1261 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 C12orf60Q5U649 245 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 RRAGBQ5VZM2 374 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 BLIDQ8IZY5 108 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 CCDC34Q96HJ3 373 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 GSDMAQ96QA5 445 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 EPC1Q9H2F5 836 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 CCNL1Q9UK58 526 aaPredicted RBP11.39□□□□□ -0.59
LRRC28-216ENST00000559819 MAPK8IP1Q9UQF2 711 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 TNRC6CQ9HCJ0 1690 aaKnown RBP11.39□□□□□ -0.59
LRRC28-216ENST00000559819 PP2D1A8MPX8 630 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 DMTNQ08495 405 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 RAD9BQ6WBX8 426 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 MAPKAPK5Q8IW41 473 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 C4orf32Q8N8J7 132 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 TGFBRAP1Q8WUH2 860 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 IRX2Q9BZI1 471 aaPredicted RBP11.39□□□□□ -0.59
LRRC28-216ENST00000559819 CPVLQ9H3G5 476 aa11.39□□□□□ -0.59
LRRC28-216ENST00000559819 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
LRRC28-216ENST00000559819 MKRN1Q9UHC7 482 aaKnown RBP11.39□□□□□ -0.59
LRRC28-216ENST00000559819 TUBB4AP04350 444 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 LDHBP07195 334 aaKnown RBP11.38□□□□□ -0.59
LRRC28-216ENST00000559819 CREBRFQ8IUR6 639 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 IQUBQ8NA54 791 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 NGLY1Q96IV0 654 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 PLIN2Q99541 437 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 MKNK2Q9HBH9 465 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 MAD2L2Q9UI95 211 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 GDAQ9Y2T3 454 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 RTCBQ9Y3I0 505 aaKnown RBP11.38□□□□□ -0.59
LRRC28-216ENST00000559819 GOLGA8HP0CJ92 632 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 CASQ1P31415 396 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 KIF5BP33176 963 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 PBX1P40424 430 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 RC3H1Q5TC82 1133 aaKnown RBP11.38□□□□□ -0.59
LRRC28-216ENST00000559819 WWC2Q6AWC2 1192 aa11.38□□□□□ -0.59
LRRC28-216ENST00000559819 CYTH3O43739 400 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
LRRC28-216ENST00000559819 H2AFXP16104 143 aaPredicted RBP11.37□□□□□ -0.59
LRRC28-216ENST00000559819 CASP14P31944 242 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 SPTY2D1Q68D10 685 aaPredicted RBP11.37□□□□□ -0.59
LRRC28-216ENST00000559819 PPFIBP1Q86W92 1011 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 MNS1Q8NEH6 495 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 TMEM60Q9H2L4 133 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 ZHX1Q9UKY1 873 aaPredicted RBP11.37□□□□□ -0.59
LRRC28-216ENST00000559819 PCDHA4Q9UN74 947 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 COL24A1Q17RW2 1714 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 MAST2Q6P0Q8 1798 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 TADA3O75528 432 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 TRAPPC10P48553 1259 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
LRRC28-216ENST00000559819 CLCN6P51797 869 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 GRM4Q14833 912 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 KRT31Q15323 416 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 INF2Q27J81 1249 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 HEATR3Q7Z4Q2 680 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 KIFC2Q96AC6 838 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 VPS16Q9H269 839 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 LZTFL1Q9NQ48 299 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 ST7Q9NRC1 585 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 TAB2Q9NYJ8 693 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 PCDHA6Q9UN73 950 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 STX8Q9UNK0 236 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 PCDHA8Q9Y5H6 950 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 RNF225M0QZC1 329 aaPredicted RBP11.37□□□□□ -0.59
LRRC28-216ENST00000559819 MFAP3LO75121 409 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 RPN1P04843 607 aaKnown RBP11.37□□□□□ -0.59
LRRC28-216ENST00000559819 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 NELFBQ8WX92 580 aa11.37□□□□□ -0.59
LRRC28-216ENST00000559819 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 GYPCP04921 128 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 CALML3P27482 149 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 STAT6P42226 847 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 GRAPQ13588 217 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 VPS72Q15906 364 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 CT47A1Q5JQC4 288 aaPredicted RBP11.36□□□□□ -0.59
LRRC28-216ENST00000559819 DGKHQ86XP1 1220 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 GRAPLQ8TC17 118 aaPredicted RBP11.36□□□□□ -0.59
LRRC28-216ENST00000559819 LRRC15Q8TF66 581 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 UBXN4Q92575 508 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 PANX2Q96RD6 677 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 TMEM47Q9BQJ4 181 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 PODXL2Q9NZ53 605 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 LTBP4Q8N2S1 1624 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 CCDC194A0A1B0GVG4 234 aa11.36□□□□□ -0.59
LRRC28-216ENST00000559819 TRIM49BA6NDI0 452 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms