RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 CLEC10AQ8IUN9 316 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 ZNF654Q8IZM8 581 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 LRRC47Q8N1G4 583 aaKnown RBP10.15□□□□□ -0.78
LRRC28-215ENST00000559774 CHURC1Q8WUH1 139 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 BRI3BPQ8WY22 251 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 BRF1Q92994 677 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 LZTS2Q9BRK4 669 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 HOXC10Q9NYD6 342 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 FEM1BQ9UK73 627 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 PNMA3Q9UL41 463 aa10.15□□□□□ -0.78
LRRC28-215ENST00000559774 NID2Q14112 1375 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 OSBPP22059 807 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 VEGFBP49765 207 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 KIF23Q02241 960 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-215ENST00000559774 ZNF543Q08ER8 600 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 COL9A3Q14050 684 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-215ENST00000559774 COG2Q14746 738 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 GPAT2Q6NUI2 795 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 BTNL9Q6UXG8 535 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 CATSPERGQ6ZRH7 1159 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 FAM160B2Q86V87 743 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 IFNL1Q8IU54 200 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 FANCBQ8NB91 859 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 CTCFLQ8NI51 663 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-215ENST00000559774 ZSCAN31Q96LW9 406 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-215ENST00000559774 CFHR5Q9BXR6 569 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 RBM28Q9NW13 759 aaKnown RBP10.14□□□□□ -0.79
LRRC28-215ENST00000559774 PNMA2Q9UL42 364 aa10.14□□□□□ -0.79
LRRC28-215ENST00000559774 KLF18A0A0U1RQI7 1052 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 PALM3A6NDB9 673 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-215ENST00000559774 BTBD19C9JJ37 291 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 ZBTB43O43298 467 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 DHX16O60231 1041 aaKnown RBP10.13□□□□□ -0.79
LRRC28-215ENST00000559774 PARP1P09874 1014 aaKnown RBP10.13□□□□□ -0.79
LRRC28-215ENST00000559774 CPA1P15085 419 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 STAT2P52630 851 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 AK2P54819 239 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 MAP2K1Q02750 393 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-215ENST00000559774 GRM4Q14833 912 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 GADL1Q6ZQY3 521 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 DNAJC5GQ8N7S2 189 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 MB21D1Q8N884 522 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 PRPF38AQ8NAV1 312 aaKnown RBP10.13□□□□□ -0.79
LRRC28-215ENST00000559774 TCEANC2Q96MN5 208 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 PARK7Q99497 189 aaKnown RBP10.13□□□□□ -0.79
LRRC28-215ENST00000559774 PTPN18Q99952 460 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 LRRC2Q9BYS8 371 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 RPAP3Q9H6T3 665 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-215ENST00000559774 BRPF3Q9ULD4 1205 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 ADAMTS5Q9UNA0 930 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 LIMCH1Q9UPQ0 1083 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 MYH8P13535 1937 aa10.13□□□□□ -0.79
LRRC28-215ENST00000559774 ATAD5Q96QE3 1844 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 PDHXO00330 501 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 CA12O43570 354 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
LRRC28-215ENST00000559774 DSG3P32926 999 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 GCLCP48506 637 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-215ENST00000559774 IRX3P78415 501 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-215ENST00000559774 APOBRQ0VD83 1088 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 TRAF1Q13077 416 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 ZYXQ15942 572 aaKnown RBP10.12□□□□□ -0.79
LRRC28-215ENST00000559774 KIAA1755Q5JYT7 1200 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 FAM83BQ5T0W9 1011 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 TREML2Q5T2D2 321 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 SPICE1Q8N0Z3 855 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 SNX21Q969T3 373 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 SLF1Q9BQI6 1058 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 SENP2Q9HC62 589 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 GPHNQ9NQX3 736 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-215ENST00000559774 SH2B1Q9NRF2 756 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-215ENST00000559774 SAGE1Q9NXZ1 904 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-215ENST00000559774 MAD2L2Q9UI95 211 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 PPP1R9AQ9ULJ8 1098 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 PHIPQ8WWQ0 1821 aa10.12□□□□□ -0.79
LRRC28-215ENST00000559774 GOLGA8BA8MQT2 603 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 TMEM232C9JQI7 657 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 KLRF2D3W0D1 207 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 IGF2BP3O00425 579 aaKnown RBP eCLIP10.11□□□□□ -0.79
LRRC28-215ENST00000559774 ATP2A1O14983 1001 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 RAD21O60216 631 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 PFKFB2O60825 505 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 AOC2O75106 756 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 FLOT1O75955 427 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 METAP2P50579 478 aaKnown RBP eCLIP10.11□□□□□ -0.79
LRRC28-215ENST00000559774 OAZ1P54368 228 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 MKRN3Q13064 507 aaKnown RBP10.11□□□□□ -0.79
LRRC28-215ENST00000559774 RTN1Q16799 776 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 CCDC96Q2M329 555 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
LRRC28-215ENST00000559774 CPLX2Q6PUV4 134 aaKnown RBP10.11□□□□□ -0.79
LRRC28-215ENST00000559774 FAM43AQ8N2R8 423 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 SPZ1Q9BXG8 430 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 TANGO6Q9C0B7 1094 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 MAF1Q9H063 256 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 ASCC2Q9H1I8 757 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-215ENST00000559774 ZFYVE28Q9HCC9 887 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 RBM27Q9P2N5 1060 aaKnown RBP10.11□□□□□ -0.79
LRRC28-215ENST00000559774 TPCN1Q9ULQ1 816 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms