RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 MCM3APO60318 1980 aa13.41□□□□□ -0.26
HERC1-204ENST00000559715 USP17L12C9JPN9 530 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 USP17L21D6R901 530 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 APBB1O00213 710 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 MBD4O95243 580 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 ITGB8P26012 769 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 CNGA1P29973 690 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 C16orf86Q6ZW13 317 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 DPP9Q86TI2 863 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 MB21D1Q8N884 522 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 HAUS7Q99871 368 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 TANGO6Q9C0B7 1094 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 BOLA2Q9H3K6 86 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 MROH8Q9H579 483 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 ZNF214Q9UL59 606 aaPredicted RBP13.4□□□□□ -0.26
HERC1-204ENST00000559715 BDP1A6H8Y1 2624 aa13.4□□□□□ -0.26
HERC1-204ENST00000559715 MYH4Q9Y623 1939 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 TRIM43BA6NCK2 446 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 FLOT1O75955 427 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 EEF2P13639 858 aaKnown RBP13.39□□□□□ -0.27
HERC1-204ENST00000559715 TAL1P17542 331 aaPredicted RBP13.39□□□□□ -0.27
HERC1-204ENST00000559715 LRRC41Q15345 812 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 UBE3CQ15386 1083 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 SHHQ15465 462 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 FAM47AQ5JRC9 791 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 C9orf50Q5SZB4 431 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 C1orf53Q5VUE5 145 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 CTR9Q6PD62 1173 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 TRIM43Q96BQ3 446 aaPredicted RBP13.39□□□□□ -0.27
HERC1-204ENST00000559715 PUS7LQ9H0K6 701 aaKnown RBP13.39□□□□□ -0.27
HERC1-204ENST00000559715 CWC22Q9HCG8 908 aaKnown RBP13.39□□□□□ -0.27
HERC1-204ENST00000559715 COG6Q9Y2V7 657 aa13.39□□□□□ -0.27
HERC1-204ENST00000559715 WDR46O15213 610 aaKnown RBP13.38□□□□□ -0.27
HERC1-204ENST00000559715 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
HERC1-204ENST00000559715 IFIT2P09913 472 aaKnown RBP13.38□□□□□ -0.27
HERC1-204ENST00000559715 ADCYAP1R1P41586 468 aa13.38□□□□□ -0.27
HERC1-204ENST00000559715 ICA1Q05084 483 aa13.38□□□□□ -0.27
HERC1-204ENST00000559715 ZNF792Q3KQV3 632 aa13.38□□□□□ -0.27
HERC1-204ENST00000559715 ARRDC4Q8NCT1 418 aa13.38□□□□□ -0.27
HERC1-204ENST00000559715 CCDC17Q96LX7 622 aa13.38□□□□□ -0.27
HERC1-204ENST00000559715 PDLIM7Q9NR12 457 aa13.38□□□□□ -0.27
HERC1-204ENST00000559715 XIRP2A4UGR9 3374 aa13.37□□□□□ -0.27
HERC1-204ENST00000559715 VWA5AO00534 786 aa13.37□□□□□ -0.27
HERC1-204ENST00000559715 PGK2P07205 417 aa13.37□□□□□ -0.27
HERC1-204ENST00000559715 ZNF865P0CJ78 1059 aaPredicted RBP13.37□□□□□ -0.27
HERC1-204ENST00000559715 TRIM60Q495X7 471 aa13.37□□□□□ -0.27
HERC1-204ENST00000559715 NCAPG2Q86XI2 1143 aa13.37□□□□□ -0.27
HERC1-204ENST00000559715 RIOX2Q8IUF8 465 aa13.37□□□□□ -0.27
HERC1-204ENST00000559715 PHF24Q9UPV7 400 aa13.37□□□□□ -0.27
HERC1-204ENST00000559715 ATP11BQ9Y2G3 1177 aa13.37□□□□□ -0.27
HERC1-204ENST00000559715 ROBO3Q96MS0 1386 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 GSG1L2A8MUP6 293 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 FCER1AP12319 257 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 EPHB4P54760 987 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 PLS1Q14651 629 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 BADQ92934 168 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 FERMT2Q96AC1 680 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 STRBPQ96SI9 672 aaKnown RBP13.36□□□□□ -0.27
HERC1-204ENST00000559715 TINF2Q9BSI4 451 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 KANSL2Q9H9L4 492 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 PPP1R9AQ9ULJ8 1098 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 DDX19BQ9UMR2 479 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 DIS3Q9Y2L1 958 aaKnown RBP13.36□□□□□ -0.27
HERC1-204ENST00000559715 RIPK3Q9Y572 518 aa13.36□□□□□ -0.27
HERC1-204ENST00000559715 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
HERC1-204ENST00000559715 MYO9BQ13459 2157 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 DNAJC25-GNG10A0A024R161 153 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 IGKV6D-41A0A0C4DH26 115 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 SMARCA5O60264 1052 aaPredicted RBP13.35□□□□□ -0.27
HERC1-204ENST00000559715 ADAMTS4O75173 837 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 HMMRO75330 724 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 SLC25A27O95847 323 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 RASA1P20936 1047 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 TLE2Q04725 743 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 SBK1Q52WX2 424 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 CCSAPQ6IQ19 270 aaPredicted RBP13.35□□□□□ -0.27
HERC1-204ENST00000559715 LENG1Q96BZ8 264 aaPredicted RBP13.35□□□□□ -0.27
HERC1-204ENST00000559715 LBHD1Q9BQE6 289 aaPredicted RBP13.35□□□□□ -0.27
HERC1-204ENST00000559715 COL25A1Q9BXS0 654 aaPredicted RBP13.35□□□□□ -0.27
HERC1-204ENST00000559715 TTYH1Q9H313 450 aaPredicted RBP13.35□□□□□ -0.27
HERC1-204ENST00000559715 NRBP1Q9UHY1 535 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 SLC4A4Q9Y6R1 1079 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 NCOR1O75376 2440 aa13.35□□□□□ -0.27
HERC1-204ENST00000559715 ADCY6O43306 1168 aa13.34□□□□□ -0.27
HERC1-204ENST00000559715 SNAI1O95863 264 aaPredicted RBP13.34□□□□□ -0.27
HERC1-204ENST00000559715 STAT3P40763 770 aa13.34□□□□□ -0.27
HERC1-204ENST00000559715 FAM83BQ5T0W9 1011 aa13.34□□□□□ -0.27
HERC1-204ENST00000559715 OSBP2Q969R2 916 aa13.34□□□□□ -0.27
HERC1-204ENST00000559715 FGD4Q96M96 766 aa13.34□□□□□ -0.27
HERC1-204ENST00000559715 FAM161BQ96MY7 647 aa13.34□□□□□ -0.27
HERC1-204ENST00000559715 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
HERC1-204ENST00000559715 SEMA6BQ9H3T3 888 aa13.34□□□□□ -0.27
HERC1-204ENST00000559715 SH2D4AQ9H788 454 aa13.34□□□□□ -0.27
HERC1-204ENST00000559715 KBTBD13C9JR72 458 aa13.33□□□□□ -0.28
HERC1-204ENST00000559715 KIAA0355O15063 1070 aa13.33□□□□□ -0.28
HERC1-204ENST00000559715 PGK1P00558 417 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms