RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 RFX5P48382 616 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-211ENST00000559460 KCTD2Q14681 263 aa11.9□□□□□ -0.5
SMAD3-211ENST00000559460 LENG1Q96BZ8 264 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-211ENST00000559460 MMP19Q99542 508 aa11.9□□□□□ -0.5
SMAD3-211ENST00000559460 TINF2Q9BSI4 451 aa11.9□□□□□ -0.5
SMAD3-211ENST00000559460 HIPK3Q9H422 1215 aa11.9□□□□□ -0.5
SMAD3-211ENST00000559460 CERS4Q9HA82 394 aa11.9□□□□□ -0.5
SMAD3-211ENST00000559460 SAP30BPQ9UHR5 308 aaKnown RBP11.9□□□□□ -0.5
SMAD3-211ENST00000559460 FAM184BQ9ULE4 1060 aa11.9□□□□□ -0.5
SMAD3-211ENST00000559460 AKAP2Q9Y2D5 859 aa11.9□□□□□ -0.5
SMAD3-211ENST00000559460 MYO9BQ13459 2157 aa11.89□□□□□ -0.51
SMAD3-211ENST00000559460 ARVCFO00192 962 aa11.89□□□□□ -0.51
SMAD3-211ENST00000559460 CA3P07451 260 aa11.89□□□□□ -0.51
SMAD3-211ENST00000559460 ABCB5Q2M3G0 1257 aa11.89□□□□□ -0.51
SMAD3-211ENST00000559460 NAA16Q6N069 864 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-211ENST00000559460 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-211ENST00000559460 SPATA5Q8NB90 893 aa11.89□□□□□ -0.51
SMAD3-211ENST00000559460 ARNTL2Q8WYA1 636 aa11.89□□□□□ -0.51
SMAD3-211ENST00000559460 ZHX1Q9UKY1 873 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-211ENST00000559460 KIF28PB7ZC32 967 aa11.88□□□□□ -0.51
SMAD3-211ENST00000559460 SLC25A27O95847 323 aa11.88□□□□□ -0.51
SMAD3-211ENST00000559460 ASGR1P07306 291 aa11.88□□□□□ -0.51
SMAD3-211ENST00000559460 CERKLQ49MI3 558 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-211ENST00000559460 METTL16Q86W50 562 aaKnown RBP11.88□□□□□ -0.51
SMAD3-211ENST00000559460 FAM126BQ8IXS8 530 aa11.88□□□□□ -0.51
SMAD3-211ENST00000559460 ZNF384Q8TF68 577 aa11.88□□□□□ -0.51
SMAD3-211ENST00000559460 CDCA7LQ96GN5 454 aa11.88□□□□□ -0.51
SMAD3-211ENST00000559460 NEUROD6Q96NK8 337 aa11.88□□□□□ -0.51
SMAD3-211ENST00000559460 ZNF536O15090 1300 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 A0A1B0GUL7 405 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 DCXO43602 365 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 TAL1P17542 331 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-211ENST00000559460 CDK7P50613 346 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 CCL23P55773 120 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 TIMM10P62072 90 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 KRT40Q6A162 431 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 TBC1D9Q6ZT07 1266 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 KLHDC9Q8NEP7 349 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 ACER1Q8TDN7 264 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 XAGE2Q96GT9 111 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 MFSD14AQ96MC6 490 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 CD320Q9NPF0 282 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 HMG20BQ9P0W2 317 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 DIS3Q9Y2L1 958 aaKnown RBP11.87□□□□□ -0.51
SMAD3-211ENST00000559460 GBF1Q92538 1859 aa11.87□□□□□ -0.51
SMAD3-211ENST00000559460 SIPA1L1O43166 1804 aa11.86□□□□□ -0.51
SMAD3-211ENST00000559460 DUSP11O75319 330 aaKnown RBP11.86□□□□□ -0.51
SMAD3-211ENST00000559460 FLOT1O75955 427 aa11.86□□□□□ -0.51
SMAD3-211ENST00000559460 PGK2P07205 417 aa11.86□□□□□ -0.51
SMAD3-211ENST00000559460 ZNF865P0CJ78 1059 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-211ENST00000559460 ACTN1P12814 892 aa11.86□□□□□ -0.51
SMAD3-211ENST00000559460 CST5P28325 142 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-211ENST00000559460 USP5P45974 858 aa11.86□□□□□ -0.51
SMAD3-211ENST00000559460 FAM178BQ8IXR5 827 aa11.86□□□□□ -0.51
SMAD3-211ENST00000559460 USP44Q9H0E7 712 aa11.86□□□□□ -0.51
SMAD3-211ENST00000559460 SERPINB13Q9UIV8 391 aa11.86□□□□□ -0.51
SMAD3-211ENST00000559460 HDAC5Q9UQL6 1122 aa11.86□□□□□ -0.51
SMAD3-211ENST00000559460 MPHOSPH10O00566 681 aaKnown RBP11.85□□□□□ -0.51
SMAD3-211ENST00000559460 PFKMP08237 780 aa11.85□□□□□ -0.51
SMAD3-211ENST00000559460 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-211ENST00000559460 COPB2P35606 906 aa11.85□□□□□ -0.51
SMAD3-211ENST00000559460 DDX10Q13206 875 aaKnown RBP11.85□□□□□ -0.51
SMAD3-211ENST00000559460 GNASQ5JWF2 1037 aa11.85□□□□□ -0.51
SMAD3-211ENST00000559460 TATDN1Q6P1N9 297 aa11.85□□□□□ -0.51
SMAD3-211ENST00000559460 TTC6Q86TZ1 520 aa11.85□□□□□ -0.51
SMAD3-211ENST00000559460 WDR63Q8IWG1 891 aa11.85□□□□□ -0.51
SMAD3-211ENST00000559460 SLC9A7Q96T83 725 aa11.85□□□□□ -0.51
SMAD3-211ENST00000559460 A0A0G2JMZ2 1700 aa11.84□□□□□ -0.51
SMAD3-211ENST00000559460 DSG3P32926 999 aa11.84□□□□□ -0.51
SMAD3-211ENST00000559460 PTPN5P54829 565 aa11.84□□□□□ -0.51
SMAD3-211ENST00000559460 GRB10Q13322 594 aa11.84□□□□□ -0.51
SMAD3-211ENST00000559460 CCSAPQ6IQ19 270 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-211ENST00000559460 PI16Q6UXB8 463 aa11.84□□□□□ -0.51
SMAD3-211ENST00000559460 MSL3Q8N5Y2 521 aaKnown RBP11.84□□□□□ -0.51
SMAD3-211ENST00000559460 ATG4CQ96DT6 458 aa11.84□□□□□ -0.51
SMAD3-211ENST00000559460 UBE2ZQ9H832 354 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-211ENST00000559460 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
SMAD3-211ENST00000559460 SALL2Q9Y467 1007 aaPredicted RBP11.84□□□□□ -0.51
SMAD3-211ENST00000559460 PTPRCP08575 1304 aa11.84□□□□□ -0.51
SMAD3-211ENST00000559460 MYADML2A6NDP7 307 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 EPOPA6NHQ4 379 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 CD4P01730 458 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 UQCRFS1P1P0C7P4 283 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 KCNA5P22460 613 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 PPP4CP60510 307 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 ZNF792Q3KQV3 632 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 PUS10Q3MIT2 529 aaKnown RBP11.83□□□□□ -0.52
SMAD3-211ENST00000559460 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-211ENST00000559460 CERS3Q8IU89 383 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 DDX11Q96FC9 970 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 EHD4Q9H223 541 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 SH2D4AQ9H788 454 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 FAM50BQ9Y247 325 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 UMODL1Q5DID0 1318 aa11.83□□□□□ -0.52
SMAD3-211ENST00000559460 XIRP2A4UGR9 3374 aa11.82□□□□□ -0.52
SMAD3-211ENST00000559460 CABYRO75952 493 aa11.82□□□□□ -0.52
SMAD3-211ENST00000559460 TAP1Q03518 808 aa11.82□□□□□ -0.52
SMAD3-211ENST00000559460 LEXMQ3ZCV2 418 aa11.82□□□□□ -0.52
SMAD3-211ENST00000559460 NOL8Q76FK4 1167 aaKnown RBP11.82□□□□□ -0.52
SMAD3-211ENST00000559460 PRRX2Q99811 253 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms