RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 FAM83BQ5T0W9 1011 aa14.95□□□□□ -0.02
LRRC28-214ENST00000559433 MB21D1Q8N884 522 aa14.95□□□□□ -0.02
LRRC28-214ENST00000559433 ATG4CQ96DT6 458 aa14.95□□□□□ -0.02
LRRC28-214ENST00000559433 MTMR4Q9NYA4 1195 aa14.95□□□□□ -0.02
LRRC28-214ENST00000559433 MKI67P46013 3256 aaKnown RBP14.95□□□□□ -0.02
LRRC28-214ENST00000559433 TTLL1O95922 423 aa14.94□□□□□ -0.02
LRRC28-214ENST00000559433 HSPD1P10809 573 aaKnown RBP14.94□□□□□ -0.02
LRRC28-214ENST00000559433 PLS1Q14651 629 aa14.94□□□□□ -0.02
LRRC28-214ENST00000559433 MORN1Q5T089 497 aa14.94□□□□□ -0.02
LRRC28-214ENST00000559433 LRRC47Q8N1G4 583 aaKnown RBP14.94□□□□□ -0.02
LRRC28-214ENST00000559433 NEDD1Q8NHV4 660 aa14.94□□□□□ -0.02
LRRC28-214ENST00000559433 TRIB2Q92519 343 aa14.94□□□□□ -0.02
LRRC28-214ENST00000559433 SHISA4Q96DD7 197 aa14.94□□□□□ -0.02
LRRC28-214ENST00000559433 NUP88Q99567 741 aaPredicted RBP14.94□□□□□ -0.02
LRRC28-214ENST00000559433 APBA2Q99767 749 aa14.94□□□□□ -0.02
LRRC28-214ENST00000559433 SPATC1LQ9H0A9 340 aa14.94□□□□□ -0.02
LRRC28-214ENST00000559433 HMX1Q9NP08 348 aaPredicted RBP14.94□□□□□ -0.02
LRRC28-214ENST00000559433 ANAPC4Q9UJX5 808 aa14.94□□□□□ -0.02
LRRC28-214ENST00000559433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
LRRC28-214ENST00000559433 ZMYM6O95789 1325 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 SLC15A5A6NIM6 579 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 TSPY2A6NKD2 308 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 F5H6K3 240 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 HIP1O00291 1037 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 SGPL1O95470 568 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 NDUFB10O96000 172 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 FGAP02671 866 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 XRCC5P13010 732 aaKnown RBP14.93□□□□□ -0.02
LRRC28-214ENST00000559433 ZKSCAN1P17029 563 aaPredicted RBP14.93□□□□□ -0.02
LRRC28-214ENST00000559433 KLRC3Q07444 240 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 TRIM32Q13049 653 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 CWC27Q6UX04 472 aaKnown RBP14.93□□□□□ -0.02
LRRC28-214ENST00000559433 U2AF1L4Q8WU68 220 aaKnown RBP14.93□□□□□ -0.02
LRRC28-214ENST00000559433 USP6NLQ92738 828 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 DPF3Q92784 378 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 DEFB118Q96PH6 123 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 MOV10L1Q9BXT6 1211 aaKnown RBP14.93□□□□□ -0.02
LRRC28-214ENST00000559433 INCENPQ9NQS7 918 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 FBXO28Q9NVF7 368 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 PPP1R9AQ9ULJ8 1098 aa14.93□□□□□ -0.02
LRRC28-214ENST00000559433 ZNFX1Q9P2E3 1918 aaKnown RBP14.92□□□□□ -0.02
LRRC28-214ENST00000559433 RANBP6O60518 1105 aaKnown RBP14.92□□□□□ -0.02
LRRC28-214ENST00000559433 PTPREP23469 700 aa14.92□□□□□ -0.02
LRRC28-214ENST00000559433 MAP2K5Q13163 448 aa14.92□□□□□ -0.02
LRRC28-214ENST00000559433 TTC22Q5TAA0 569 aa14.92□□□□□ -0.02
LRRC28-214ENST00000559433 SHCBP1Q8NEM2 672 aa14.92□□□□□ -0.02
LRRC28-214ENST00000559433 MKL1Q969V6 931 aa14.92□□□□□ -0.02
LRRC28-214ENST00000559433 SLF1Q9BQI6 1058 aa14.92□□□□□ -0.02
LRRC28-214ENST00000559433 HTATIP2Q9BUP3 242 aa14.92□□□□□ -0.02
LRRC28-214ENST00000559433 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.92□□□□□ -0.02
LRRC28-214ENST00000559433 TOMM22Q9NS69 142 aa14.92□□□□□ -0.02
LRRC28-214ENST00000559433 SYNPO2Q9UMS6 1093 aa14.92□□□□□ -0.02
LRRC28-214ENST00000559433 CTDP1Q9Y5B0 961 aaPredicted RBP14.92□□□□□ -0.02
LRRC28-214ENST00000559433 RPTORQ8N122 1335 aa14.92□□□□□ -0.02
LRRC28-214ENST00000559433 ORC4O43929 436 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 PRKAR2AP13861 404 aaKnown RBP14.91□□□□□ -0.02
LRRC28-214ENST00000559433 GSPT1P15170 499 aaKnown RBP14.91□□□□□ -0.02
LRRC28-214ENST00000559433 ERCC3P19447 782 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 HAND2P61296 217 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 GRB14Q14449 540 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 TMEM132BQ14DG7 1078 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 CCL14Q16627 93 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 RRP12Q5JTH9 1297 aaKnown RBP14.91□□□□□ -0.02
LRRC28-214ENST00000559433 PPP4R3BQ5MIZ7 849 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 DPP9Q86TI2 863 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 NCAPG2Q86XI2 1143 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 GMCL1P1Q8NEA9 526 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 PAK6Q9NQU5 681 aaPredicted RBP14.91□□□□□ -0.02
LRRC28-214ENST00000559433 SLC5A4Q9NY91 659 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 ADAMTS5Q9UNA0 930 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 TACC3Q9Y6A5 838 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 PLXNA1Q9UIW2 1896 aa14.91□□□□□ -0.02
LRRC28-214ENST00000559433 FRMPD3Q5JV73 1810 aa14.9□□□□□ -0.02
LRRC28-214ENST00000559433 VWA5AO00534 786 aa14.9□□□□□ -0.02
LRRC28-214ENST00000559433 STRNO43815 780 aa14.9□□□□□ -0.02
LRRC28-214ENST00000559433 NMT2O60551 498 aa14.9□□□□□ -0.02
LRRC28-214ENST00000559433 FARP2O94887 1054 aaPredicted RBP14.9□□□□□ -0.02
LRRC28-214ENST00000559433 MFSD14CQ5VZR4 134 aa14.9□□□□□ -0.02
LRRC28-214ENST00000559433 SLFN13Q68D06 897 aa14.9□□□□□ -0.02
LRRC28-214ENST00000559433 MROH8Q9H579 483 aa14.9□□□□□ -0.02
LRRC28-214ENST00000559433 ISY1Q9ULR0 285 aaKnown RBP14.9□□□□□ -0.02
LRRC28-214ENST00000559433 STX8Q9UNK0 236 aa14.9□□□□□ -0.02
LRRC28-214ENST00000559433 SLC25A27O95847 323 aa14.89□□□□□ -0.03
LRRC28-214ENST00000559433 ADORA2AP29274 412 aa14.89□□□□□ -0.03
LRRC28-214ENST00000559433 MAP3K21Q5TCX8 1036 aa14.89□□□□□ -0.03
LRRC28-214ENST00000559433 IL17RBQ9NRM6 502 aa14.89□□□□□ -0.03
LRRC28-214ENST00000559433 FGRP09769 529 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 BMP3P12645 472 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 CACNB2Q08289 660 aaPredicted RBP14.88□□□□□ -0.03
LRRC28-214ENST00000559433 AKNAD1Q5T1N1 836 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 MFSD6Q6ZSS7 791 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 RIOX2Q8IUF8 465 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 TBC1D10CQ8IV04 446 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 PRPF38AQ8NAV1 312 aaKnown RBP14.88□□□□□ -0.03
LRRC28-214ENST00000559433 NPLOC4Q8TAT6 608 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 KIFC2Q96AC6 838 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 CHMP4CQ96CF2 233 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 NBPF3Q9H094 633 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 FLRT1Q9NZU1 646 aa14.88□□□□□ -0.03
LRRC28-214ENST00000559433 FEM1BQ9UK73 627 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms