RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 APBA2Q99767 749 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 UNC93B1Q9H1C4 597 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 FBXO28Q9NVF7 368 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 MTMR4Q9NYA4 1195 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 HOXC10Q9NYD6 342 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 TACC3Q9Y6A5 838 aa13.01□□□□□ -0.33
SPG11-216ENST00000559347 HIP1O00291 1037 aa13□□□□□ -0.33
SPG11-216ENST00000559347 TTLL1O95922 423 aa13□□□□□ -0.33
SPG11-216ENST00000559347 NDUFB10O96000 172 aa13□□□□□ -0.33
SPG11-216ENST00000559347 FGAP02671 866 aa13□□□□□ -0.33
SPG11-216ENST00000559347 CYP2B6P20813 491 aa13□□□□□ -0.33
SPG11-216ENST00000559347 MFAP1P55081 439 aaKnown RBP13□□□□□ -0.33
SPG11-216ENST00000559347 FAM47AQ5JRC9 791 aa13□□□□□ -0.33
SPG11-216ENST00000559347 TTC22Q5TAA0 569 aa13□□□□□ -0.33
SPG11-216ENST00000559347 MOV10L1Q9BXT6 1211 aaKnown RBP13□□□□□ -0.33
SPG11-216ENST00000559347 SPATC1LQ9H0A9 340 aa13□□□□□ -0.33
SPG11-216ENST00000559347 RNF208Q9H0X6 261 aa13□□□□□ -0.33
SPG11-216ENST00000559347 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
SPG11-216ENST00000559347 SYNPO2Q9UMS6 1093 aa13□□□□□ -0.33
SPG11-216ENST00000559347 DNAH12Q6ZR08 3092 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 TSPY2A6NKD2 308 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 F5H6K3 240 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 ORC4O43929 436 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 RAD21O60216 631 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 GJB1P08034 283 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 FGRP09769 529 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 XRCC5P13010 732 aaKnown RBP12.99□□□□□ -0.33
SPG11-216ENST00000559347 RGS2P41220 211 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 GJA8P48165 433 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 TFAP4Q01664 338 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 KLRC3Q07444 240 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 TRIM32Q13049 653 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 GRB14Q14449 540 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 CWC27Q6UX04 472 aaKnown RBP12.99□□□□□ -0.33
SPG11-216ENST00000559347 LRRC47Q8N1G4 583 aaKnown RBP12.99□□□□□ -0.33
SPG11-216ENST00000559347 GMCL1P1Q8NEA9 526 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 SHCBP1Q8NEM2 672 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 MKL1Q969V6 931 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 NUP88Q99567 741 aaPredicted RBP12.99□□□□□ -0.33
SPG11-216ENST00000559347 NBPF3Q9H094 633 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 CWC22Q9HCG8 908 aaKnown RBP12.99□□□□□ -0.33
SPG11-216ENST00000559347 PAK6Q9NQU5 681 aaPredicted RBP12.99□□□□□ -0.33
SPG11-216ENST00000559347 CLIP2Q9UDT6 1046 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 PPP1R9AQ9ULJ8 1098 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 ADAMTS5Q9UNA0 930 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 IVNS1ABPQ9Y6Y0 642 aa12.99□□□□□ -0.33
SPG11-216ENST00000559347 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
SPG11-216ENST00000559347 ZKSCAN1P17029 563 aaPredicted RBP12.98□□□□□ -0.33
SPG11-216ENST00000559347 PTPREP23469 700 aa12.98□□□□□ -0.33
SPG11-216ENST00000559347 MAP2K5Q13163 448 aa12.98□□□□□ -0.33
SPG11-216ENST00000559347 TMEM132BQ14DG7 1078 aa12.98□□□□□ -0.33
SPG11-216ENST00000559347 MAP3K21Q5TCX8 1036 aa12.98□□□□□ -0.33
SPG11-216ENST00000559347 REPS2Q8NFH8 660 aa12.98□□□□□ -0.33
SPG11-216ENST00000559347 U2AF1L4Q8WU68 220 aaKnown RBP12.98□□□□□ -0.33
SPG11-216ENST00000559347 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.33
SPG11-216ENST00000559347 IL25Q9H293 177 aa12.98□□□□□ -0.33
SPG11-216ENST00000559347 INCENPQ9NQS7 918 aa12.98□□□□□ -0.33
SPG11-216ENST00000559347 LRRC37A2A6NM11 1700 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 RAD50Q92878 1312 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 VWA5AO00534 786 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 NMT2O60551 498 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 HOXC6P09630 235 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 ERCC3P19447 782 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 HAND2P61296 217 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 PLS1Q14651 629 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 CCL14Q16627 93 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 PPP4R3BQ5MIZ7 849 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 TRMT44Q8IYL2 757 aaKnown RBP12.97□□□□□ -0.33
SPG11-216ENST00000559347 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 IL17RBQ9NRM6 502 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 ZNF214Q9UL59 606 aaPredicted RBP12.97□□□□□ -0.33
SPG11-216ENST00000559347 STX8Q9UNK0 236 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 LCTP09848 1927 aa12.97□□□□□ -0.33
SPG11-216ENST00000559347 NEDD4P46934 1319 aa12.96□□□□□ -0.33
SPG11-216ENST00000559347 RPTORQ8N122 1335 aa12.96□□□□□ -0.33
SPG11-216ENST00000559347 RANBP6O60518 1105 aaKnown RBP12.96□□□□□ -0.33
SPG11-216ENST00000559347 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
SPG11-216ENST00000559347 ADORA2AP29274 412 aa12.96□□□□□ -0.33
SPG11-216ENST00000559347 NOVP48745 357 aa12.96□□□□□ -0.33
SPG11-216ENST00000559347 STAG1Q8WVM7 1258 aa12.96□□□□□ -0.33
SPG11-216ENST00000559347 DEFB118Q96PH6 123 aa12.96□□□□□ -0.33
SPG11-216ENST00000559347 DSCC1Q9BVC3 393 aa12.96□□□□□ -0.33
SPG11-216ENST00000559347 MROH8Q9H579 483 aa12.96□□□□□ -0.33
SPG11-216ENST00000559347 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
SPG11-216ENST00000559347 MCM3APO60318 1980 aa12.95□□□□□ -0.34
SPG11-216ENST00000559347 SGPL1O95470 568 aa12.95□□□□□ -0.34
SPG11-216ENST00000559347 PCP11498 1178 aaKnown RBP12.95□□□□□ -0.34
SPG11-216ENST00000559347 CACNB2Q08289 660 aaPredicted RBP12.95□□□□□ -0.34
SPG11-216ENST00000559347 RRP12Q5JTH9 1297 aaKnown RBP12.95□□□□□ -0.34
SPG11-216ENST00000559347 AKNAD1Q5T1N1 836 aa12.95□□□□□ -0.34
SPG11-216ENST00000559347 PRPF38BQ5VTL8 546 aaKnown RBP12.95□□□□□ -0.34
SPG11-216ENST00000559347 RASGRP2Q7LDG7 609 aa12.95□□□□□ -0.34
SPG11-216ENST00000559347 UBE2Q1Q7Z7E8 422 aa12.95□□□□□ -0.34
SPG11-216ENST00000559347 NCAPG2Q86XI2 1143 aa12.95□□□□□ -0.34
SPG11-216ENST00000559347 RIOX2Q8IUF8 465 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms