RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TCP11L1Q9NUJ3 509 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 ZSWIM5Q9P217 1185 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 PTPN22Q9Y2R2 807 aa22.08■■□□□ 1.13
CASC4-209ENST00000559222 E7EWF7 191 aa22.07■■□□□ 1.12
CASC4-209ENST00000559222 FCGRTP55899 365 aa22.07■■□□□ 1.12
CASC4-209ENST00000559222 FBXO46Q6PJ61 603 aaPredicted RBP22.07■■□□□ 1.12
CASC4-209ENST00000559222 LBX2Q6XYB7 198 aa22.07■■□□□ 1.12
CASC4-209ENST00000559222 KIAA1211Q6ZU35 1233 aa22.07■■□□□ 1.12
CASC4-209ENST00000559222 HPS5Q9UPZ3 1129 aa22.07■■□□□ 1.12
CASC4-209ENST00000559222 SLC27A2O14975 620 aa22.06■■□□□ 1.12
CASC4-209ENST00000559222 PRKCZQ05513 592 aa22.06■■□□□ 1.12
CASC4-209ENST00000559222 GPRC5AQ8NFJ5 357 aa22.06■■□□□ 1.12
CASC4-209ENST00000559222 RABGAP1Q9Y3P9 1069 aa22.06■■□□□ 1.12
CASC4-209ENST00000559222 MCCP23508 829 aa22.05■■□□□ 1.12
CASC4-209ENST00000559222 NECTIN1Q15223 517 aa22.05■■□□□ 1.12
CASC4-209ENST00000559222 CREB3L3Q68CJ9 461 aa22.05■■□□□ 1.12
CASC4-209ENST00000559222 SRRDQ9UH36 339 aa22.05■■□□□ 1.12
CASC4-209ENST00000559222 PPP1R9AQ9ULJ8 1098 aa22.05■■□□□ 1.12
CASC4-209ENST00000559222 SYNPO2Q9UMS6 1093 aa22.05■■□□□ 1.12
CASC4-209ENST00000559222 MYPNQ86TC9 1320 aa22.05■■□□□ 1.12
CASC4-209ENST00000559222 TNPO2O14787 897 aaKnown RBP22.04■■□□□ 1.12
CASC4-209ENST00000559222 TOP1P11387 765 aaKnown RBP22.04■■□□□ 1.12
CASC4-209ENST00000559222 ANTXR2P58335 489 aa22.04■■□□□ 1.12
CASC4-209ENST00000559222 KCTD1Q719H9 257 aa22.04■■□□□ 1.12
CASC4-209ENST00000559222 CHST3Q7LGC8 479 aa22.04■■□□□ 1.12
CASC4-209ENST00000559222 ENAHQ8N8S7 591 aaPredicted RBP22.04■■□□□ 1.12
CASC4-209ENST00000559222 REPS2Q8NFH8 660 aa22.04■■□□□ 1.12
CASC4-209ENST00000559222 GTF3C2Q8WUA4 911 aaPredicted RBP22.04■■□□□ 1.12
CASC4-209ENST00000559222 KRT23Q9C075 422 aa22.04■■□□□ 1.12
CASC4-209ENST00000559222 TNKSO95271 1327 aa22.04■■□□□ 1.12
CASC4-209ENST00000559222 BMP3P12645 472 aa22.03■■□□□ 1.12
CASC4-209ENST00000559222 TMEM132BQ14DG7 1078 aa22.03■■□□□ 1.12
CASC4-209ENST00000559222 PKN2Q16513 984 aaKnown RBP22.03■■□□□ 1.12
CASC4-209ENST00000559222 CASC1Q6TDU7 716 aa22.03■■□□□ 1.12
CASC4-209ENST00000559222 GMCL1Q96IK5 515 aa22.03■■□□□ 1.12
CASC4-209ENST00000559222 ZSCAN10Q96SZ4 725 aaPredicted RBP22.03■■□□□ 1.12
CASC4-209ENST00000559222 CNNM2Q9H8M5 875 aa22.03■■□□□ 1.12
CASC4-209ENST00000559222 SENP2Q9HC62 589 aa22.03■■□□□ 1.12
CASC4-209ENST00000559222 ISY1Q9ULR0 285 aaKnown RBP22.03■■□□□ 1.12
CASC4-209ENST00000559222 ADAMTS5Q9UNA0 930 aa22.03■■□□□ 1.12
CASC4-209ENST00000559222 FRMPD2Q68DX3 1309 aaPredicted RBP22.03■■□□□ 1.12
CASC4-209ENST00000559222 TTBK2Q6IQ55 1244 aa22.02■■□□□ 1.12
CASC4-209ENST00000559222 MB21D2Q8IYB1 491 aaPredicted RBP22.02■■□□□ 1.12
CASC4-209ENST00000559222 SLF1Q9BQI6 1058 aa22.02■■□□□ 1.12
CASC4-209ENST00000559222 MOV10L1Q9BXT6 1211 aaKnown RBP22.02■■□□□ 1.12
CASC4-209ENST00000559222 HOXC10Q9NYD6 342 aa22.02■■□□□ 1.12
CASC4-209ENST00000559222 TMEM232C9JQI7 657 aa22.01■■□□□ 1.11
CASC4-209ENST00000559222 VWA5AO00534 786 aa22.01■■□□□ 1.11
CASC4-209ENST00000559222 SLC1A4P43007 532 aa22.01■■□□□ 1.11
CASC4-209ENST00000559222 FLT3LGP49771 235 aa22.01■■□□□ 1.11
CASC4-209ENST00000559222 SEC23AQ15436 765 aa22.01■■□□□ 1.11
CASC4-209ENST00000559222 RASEFQ8IZ41 740 aa22.01■■□□□ 1.11
CASC4-209ENST00000559222 SH3TC2Q8TF17 1288 aa22.01■■□□□ 1.11
CASC4-209ENST00000559222 KIFC2Q96AC6 838 aa22.01■■□□□ 1.11
CASC4-209ENST00000559222 SPATC1LQ9H0A9 340 aa22.01■■□□□ 1.11
CASC4-209ENST00000559222 PDHBP11177 359 aa22■■□□□ 1.11
CASC4-209ENST00000559222 SNAP25P60880 206 aa22■■□□□ 1.11
CASC4-209ENST00000559222 PLS1Q14651 629 aa22■■□□□ 1.11
CASC4-209ENST00000559222 CCDC96Q2M329 555 aa22■■□□□ 1.11
CASC4-209ENST00000559222 PPP4R3BQ5MIZ7 849 aa22■■□□□ 1.11
CASC4-209ENST00000559222 GPR142Q7Z601 462 aa22■■□□□ 1.11
CASC4-209ENST00000559222 IQCA1Q86XH1 822 aa22■■□□□ 1.11
CASC4-209ENST00000559222 GPHNQ9NQX3 736 aaPredicted RBP22■■□□□ 1.11
CASC4-209ENST00000559222 GJD2Q9UKL4 321 aa22■■□□□ 1.11
CASC4-209ENST00000559222 ZNF214Q9UL59 606 aaPredicted RBP22■■□□□ 1.11
CASC4-209ENST00000559222 SMCHD1A6NHR9 2005 aa22■■□□□ 1.11
CASC4-209ENST00000559222 ZNF236Q9UL36 1845 aa21.99■■□□□ 1.11
CASC4-209ENST00000559222 GNRH1P01148 92 aa21.99■■□□□ 1.11
CASC4-209ENST00000559222 TAL1P17542 331 aaPredicted RBP21.99■■□□□ 1.11
CASC4-209ENST00000559222 ARHGEF6Q15052 776 aa21.99■■□□□ 1.11
CASC4-209ENST00000559222 DGKHQ86XP1 1220 aa21.99■■□□□ 1.11
CASC4-209ENST00000559222 NCOA7Q8NI08 942 aa21.99■■□□□ 1.11
CASC4-209ENST00000559222 ANKS1AQ92625 1134 aa21.99■■□□□ 1.11
CASC4-209ENST00000559222 TTC14Q96N46 770 aa21.99■■□□□ 1.11
CASC4-209ENST00000559222 GPCPD1Q9NPB8 672 aa21.99■■□□□ 1.11
CASC4-209ENST00000559222 FEM1BQ9UK73 627 aa21.99■■□□□ 1.11
CASC4-209ENST00000559222 ZNFX1Q9P2E3 1918 aaKnown RBP21.99■■□□□ 1.11
CASC4-209ENST00000559222 ELNP15502 786 aa21.98■■□□□ 1.11
CASC4-209ENST00000559222 SLC16A2P36021 539 aa21.98■■□□□ 1.11
CASC4-209ENST00000559222 TRDNQ13061 729 aa21.98■■□□□ 1.11
CASC4-209ENST00000559222 WDR78Q5VTH9 848 aa21.98■■□□□ 1.11
CASC4-209ENST00000559222 RALYLQ86SE5 291 aaKnown RBP21.98■■□□□ 1.11
CASC4-209ENST00000559222 MB21D1Q8N884 522 aa21.98■■□□□ 1.11
CASC4-209ENST00000559222 PNMA1Q8ND90 353 aa21.98■■□□□ 1.11
CASC4-209ENST00000559222 DCAF4Q8WV16 495 aa21.98■■□□□ 1.11
CASC4-209ENST00000559222 COA7Q96BR5 231 aa21.98■■□□□ 1.11
CASC4-209ENST00000559222 UBAC1Q9BSL1 405 aa21.98■■□□□ 1.11
CASC4-209ENST00000559222 CPVLQ9H3G5 476 aa21.98■■□□□ 1.11
CASC4-209ENST00000559222 CCDC85CA6NKD9 419 aa21.97■■□□□ 1.11
CASC4-209ENST00000559222 GOLGA8HP0CJ92 632 aa21.97■■□□□ 1.11
CASC4-209ENST00000559222 SNHG28P0DPA3 235 aa21.97■■□□□ 1.11
CASC4-209ENST00000559222 ERCC3P19447 782 aa21.97■■□□□ 1.11
CASC4-209ENST00000559222 MAPK4P31152 587 aa21.97■■□□□ 1.11
CASC4-209ENST00000559222 ADCK5Q3MIX3 580 aa21.97■■□□□ 1.11
CASC4-209ENST00000559222 PLEKHH3Q7Z736 793 aa21.97■■□□□ 1.11
CASC4-209ENST00000559222 PRPF38AQ8NAV1 312 aaKnown RBP21.97■■□□□ 1.11
CASC4-209ENST00000559222 RAET1EQ8TD07 263 aa21.97■■□□□ 1.11
CASC4-209ENST00000559222 RAVER2Q9HCJ3 691 aaKnown RBP21.97■■□□□ 1.11
CASC4-209ENST00000559222 CENPFP49454 3210 aa21.96■■□□□ 1.11
CASC4-209ENST00000559222 MYCP01106 439 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms