RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 BCRP11274 1271 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 ZKSCAN1P17029 563 aaPredicted RBP12.8□□□□□ -0.36
TPM1-217ENST00000559108 RXRAP19793 462 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 CASTP20810 708 aaKnown RBP12.8□□□□□ -0.36
TPM1-217ENST00000559108 TROAPQ12815 778 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 C17orf99Q6UX52 265 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 DHX32Q7L7V1 743 aaKnown RBP12.8□□□□□ -0.36
TPM1-217ENST00000559108 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
TPM1-217ENST00000559108 STAG2Q8N3U4 1231 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 PNMA1Q8ND90 353 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 REPS2Q8NFH8 660 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 LPAR1Q92633 364 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 ATG4CQ96DT6 458 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 GMCL1Q96IK5 515 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 TTC14Q96N46 770 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 SH2D4AQ9H788 454 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 GOPCQ9HD26 462 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 ZCCHC17Q9NP64 241 aaKnown RBP12.8□□□□□ -0.36
TPM1-217ENST00000559108 SAGE1Q9NXZ1 904 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 BTBD7Q9P203 1132 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 RBPJLQ9UBG7 517 aa12.8□□□□□ -0.36
TPM1-217ENST00000559108 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 NT5C2P49902 561 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 SNAP25P60880 206 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 HERVK_113P62684 666 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 ZNF543Q08ER8 600 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 TOB2Q14106 344 aaPredicted RBP12.79□□□□□ -0.36
TPM1-217ENST00000559108 KRT32Q14532 448 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
TPM1-217ENST00000559108 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
TPM1-217ENST00000559108 AGXT2Q9BYV1 514 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 TANGO6Q9C0B7 1094 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 ARHGAP39Q9C0H5 1083 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 WDR19Q8NEZ3 1342 aa12.79□□□□□ -0.36
TPM1-217ENST00000559108 TLR2O60603 784 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 FLOT1O75955 427 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
TPM1-217ENST00000559108 BMP3P12645 472 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 DSG3P32926 999 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 SLC16A2P36021 539 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 RBM25P49756 843 aaKnown RBP12.78□□□□□ -0.36
TPM1-217ENST00000559108 WTAPQ15007 396 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 Q3C1V9 767 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 BLOC1S2Q6QNY1 142 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 Q6ZUG5 572 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 ZNF654Q8IZM8 581 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 ANKRD13CQ8N6S4 541 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 TMEM87BQ96K49 555 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 PARK7Q99497 189 aaKnown RBP12.78□□□□□ -0.36
TPM1-217ENST00000559108 C22orf23Q9BZE7 217 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 TM6SF1Q9BZW5 370 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 KAT14Q9H8E8 782 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 MAD2L2Q9UI95 211 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 ADAMTS5Q9UNA0 930 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
TPM1-217ENST00000559108 RBBP6Q7Z6E9 1792 aaKnown RBP12.77□□□□□ -0.36
TPM1-217ENST00000559108 TMEM232C9JQI7 657 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 GPR25O00155 361 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 DTNBO60941 627 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 ALDH1A1P00352 501 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 SLC1A4P43007 532 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 LBX1P52954 281 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 ANAPC15P60006 121 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
TPM1-217ENST00000559108 APOBRQ0VD83 1088 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 GRM4Q14833 912 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 CCDC96Q2M329 555 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 SAMD1Q6SPF0 538 aaPredicted RBP12.77□□□□□ -0.37
TPM1-217ENST00000559108 LBX2Q6XYB7 198 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 SGMS1Q86VZ5 419 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 CCDC144CPQ8IYA2 1237 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 ZNF296Q8WUU4 475 aaPredicted RBP12.77□□□□□ -0.37
TPM1-217ENST00000559108 DCAF4Q8WV16 495 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 TBC1D32Q96NH3 1257 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 MTA3Q9BTC8 594 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.37
TPM1-217ENST00000559108 PPP1R9AQ9ULJ8 1098 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 ZNF536O15090 1300 aa12.77□□□□□ -0.37
TPM1-217ENST00000559108 ZNFX1Q9P2E3 1918 aaKnown RBP12.76□□□□□ -0.37
TPM1-217ENST00000559108 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
TPM1-217ENST00000559108 CYTH3O43739 400 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 PLEKHA8P1O95397 391 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 OSBPP22059 807 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 LIFRP42702 1097 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 COG2Q14746 738 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 TMEM132BQ14DG7 1078 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 BTNL9Q6UXG8 535 aa12.76□□□□□ -0.37
TPM1-217ENST00000559108 CMTR1Q8N1G2 835 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms