RNA–Protein interactions for RNA: ENST00000558886.1

NEO1-205, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-205ENST00000558886 IL17RAQ96F46 866 aa12.21□□□□□ -0.45
NEO1-205ENST00000558886 MS4A4AQ96JQ5 239 aa12.21□□□□□ -0.45
NEO1-205ENST00000558886 TANGO6Q9C0B7 1094 aa12.21□□□□□ -0.45
NEO1-205ENST00000558886 CTDP1Q9Y5B0 961 aaPredicted RBP12.21□□□□□ -0.45
NEO1-205ENST00000558886 KLF18A0A0U1RQI7 1052 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 WDR46O15213 610 aaKnown RBP12.2□□□□□ -0.46
NEO1-205ENST00000558886 ZBTB43O43298 467 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 PARP1P09874 1014 aaKnown RBP12.2□□□□□ -0.46
NEO1-205ENST00000558886 VCAM1P19320 739 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 IRX3P78415 501 aaPredicted RBP12.2□□□□□ -0.46
NEO1-205ENST00000558886 APOBRQ0VD83 1088 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 COL9A3Q14050 684 aaPredicted RBP12.2□□□□□ -0.46
NEO1-205ENST00000558886 FAM83BQ5T0W9 1011 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 ANKRD23Q86SG2 305 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 ZNF654Q8IZM8 581 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 CTCFLQ8NI51 663 aaPredicted RBP12.2□□□□□ -0.46
NEO1-205ENST00000558886 CHURC1Q8WUH1 139 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 BRI3BPQ8WY22 251 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 C12orf42Q96LP6 360 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 RPAP3Q9H6T3 665 aaPredicted RBP12.2□□□□□ -0.46
NEO1-205ENST00000558886 GPCPD1Q9NPB8 672 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 AGTPBP1Q9UPW5 1226 aa12.2□□□□□ -0.46
NEO1-205ENST00000558886 TESPA1A2RU30 521 aaPredicted RBP12.19□□□□□ -0.46
NEO1-205ENST00000558886 BTBD19C9JJ37 291 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 PDHXO00330 501 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 CA12O43570 354 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 DDAH1O94760 285 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 ALDH1A1P00352 501 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 KIF5BP33176 963 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 TM4SF4P48230 202 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 DGKZQ13574 1117 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 TREML2Q5T2D2 321 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 KCTD1Q719H9 257 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 NOL8Q76FK4 1167 aaKnown RBP12.19□□□□□ -0.46
NEO1-205ENST00000558886 SGMS1Q86VZ5 419 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 IFNL1Q8IU54 200 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 FBXL16Q8N461 479 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 GMCL1Q96IK5 515 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 NUP88Q99567 741 aaPredicted RBP12.19□□□□□ -0.46
NEO1-205ENST00000558886 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
NEO1-205ENST00000558886 SENP2Q9HC62 589 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 HOXC10Q9NYD6 342 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 FEM1BQ9UK73 627 aa12.19□□□□□ -0.46
NEO1-205ENST00000558886 FRMPD2Q68DX3 1309 aaPredicted RBP12.18□□□□□ -0.46
NEO1-205ENST00000558886 CASP8AP2Q9UKL3 1982 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 MYH4Q9Y623 1939 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 GOLGA8BA8MQT2 603 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 TMEM232C9JQI7 657 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 DHX16O60231 1041 aaKnown RBP12.18□□□□□ -0.46
NEO1-205ENST00000558886 FLOT1O75955 427 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 PDHBP11177 359 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 GNAQP50148 359 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 AK2P54819 239 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 COG2Q14746 738 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 ASPRV1Q53RT3 343 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 KIAA1755Q5JYT7 1200 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 GPATCH4Q5T3I0 446 aaKnown RBP12.18□□□□□ -0.46
NEO1-205ENST00000558886 GPAT2Q6NUI2 795 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 CATSPERGQ6ZRH7 1159 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 FAM160B2Q86V87 743 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 MICU3Q86XE3 530 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 POTEDQ86YR6 584 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 RAB11FIP4Q86YS3 637 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 CCDC144CPQ8IYA2 1237 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 SMCR8Q8TEV9 937 aaPredicted RBP12.18□□□□□ -0.46
NEO1-205ENST00000558886 KIF2CQ99661 725 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
NEO1-205ENST00000558886 MYL10Q9BUA6 226 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 BRPF3Q9ULD4 1205 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 SLC45A1Q9Y2W3 748 aa12.18□□□□□ -0.46
NEO1-205ENST00000558886 GREB1LQ9C091 1923 aaPredicted RBP12.17□□□□□ -0.46
NEO1-205ENST00000558886 PHIPQ8WWQ0 1821 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 CCDC196A0A1B0GTZ2 297 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 GOLGA8AA7E2F4 631 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 GOLGA8HP0CJ92 632 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 HOXA7P31268 230 aaPredicted RBP12.17□□□□□ -0.46
NEO1-205ENST00000558886 METAP2P50579 478 aaKnown RBP eCLIP12.17□□□□□ -0.46
NEO1-205ENST00000558886 STAT2P52630 851 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 ZNF543Q08ER8 600 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 MOGSQ13724 837 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 TOB2Q14106 344 aaPredicted RBP12.17□□□□□ -0.46
NEO1-205ENST00000558886 GRM4Q14833 912 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 TAF1CQ15572 869 aaPredicted RBP12.17□□□□□ -0.46
NEO1-205ENST00000558886 APOA5Q6Q788 366 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 FANCBQ8NB91 859 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 KIFC2Q96AC6 838 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 PARK7Q99497 189 aaKnown RBP12.17□□□□□ -0.46
NEO1-205ENST00000558886 MAP3K14Q99558 947 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 PTPN18Q99952 460 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 SLF1Q9BQI6 1058 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 LZTS2Q9BRK4 669 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 AGXT2Q9BYV1 514 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 ASCC2Q9H1I8 757 aaPredicted RBP12.17□□□□□ -0.46
NEO1-205ENST00000558886 SLKQ9H2G2 1235 aaPredicted RBP12.17□□□□□ -0.46
NEO1-205ENST00000558886 ZFYVE28Q9HCC9 887 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
NEO1-205ENST00000558886 LIMCH1Q9UPQ0 1083 aa12.17□□□□□ -0.46
NEO1-205ENST00000558886 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms