RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CYP21A2P08686 494 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 BACE1P56817 501 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 TFAP4Q01664 338 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 SH3D19Q5HYK7 790 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 AKNAD1Q5T1N1 836 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 FASTKD5Q7L8L6 764 aaKnown RBP18.37■□□□□ 0.53
LINC01220-201ENST00000558575 ANKRD13CQ8N6S4 541 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 NEDD1Q8NHV4 660 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 STAG1Q8WVM7 1258 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 COA7Q96BR5 231 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 TBC1D2Q9BYX2 928 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 OGDHLQ9ULD0 1010 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 SLC45A1Q9Y2W3 748 aa18.37■□□□□ 0.53
LINC01220-201ENST00000558575 RBM8AQ9Y5S9 174 aaKnown RBP18.37■□□□□ 0.53
LINC01220-201ENST00000558575 BDP1A6H8Y1 2624 aa18.36■□□□□ 0.53
LINC01220-201ENST00000558575 NECTIN1Q15223 517 aa18.36■□□□□ 0.53
LINC01220-201ENST00000558575 KIAA1211Q6ZU35 1233 aa18.36■□□□□ 0.53
LINC01220-201ENST00000558575 MAFAQ8NHW3 353 aaPredicted RBP18.36■□□□□ 0.53
LINC01220-201ENST00000558575 SMCR8Q8TEV9 937 aaPredicted RBP18.36■□□□□ 0.53
LINC01220-201ENST00000558575 CDX2Q99626 313 aaPredicted RBP18.36■□□□□ 0.53
LINC01220-201ENST00000558575 AS3MTQ9HBK9 375 aa18.36■□□□□ 0.53
LINC01220-201ENST00000558575 ZNF287Q9HBT7 754 aa18.36■□□□□ 0.53
LINC01220-201ENST00000558575 HMX1Q9NP08 348 aaPredicted RBP18.36■□□□□ 0.53
LINC01220-201ENST00000558575 ANO2Q9NQ90 1003 aa18.36■□□□□ 0.53
LINC01220-201ENST00000558575 EMILIN3Q9NT22 766 aa18.36■□□□□ 0.53
LINC01220-201ENST00000558575 NEDD4P46934 1319 aa18.35■□□□□ 0.53
LINC01220-201ENST00000558575 USP17L10C9JJH3 530 aa18.35■□□□□ 0.53
LINC01220-201ENST00000558575 COL6A1P12109 1028 aa18.35■□□□□ 0.53
LINC01220-201ENST00000558575 HMGCS2P54868 508 aa18.35■□□□□ 0.53
LINC01220-201ENST00000558575 MTMR2Q13614 643 aa18.35■□□□□ 0.53
LINC01220-201ENST00000558575 IMMTQ16891 758 aaKnown RBP18.35■□□□□ 0.53
LINC01220-201ENST00000558575 CASC1Q6TDU7 716 aa18.35■□□□□ 0.53
LINC01220-201ENST00000558575 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
LINC01220-201ENST00000558575 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
LINC01220-201ENST00000558575 IL17RBQ9NRM6 502 aa18.35■□□□□ 0.53
LINC01220-201ENST00000558575 EEF2P13639 858 aaKnown RBP18.34■□□□□ 0.53
LINC01220-201ENST00000558575 LRRC26Q2I0M4 334 aa18.34■□□□□ 0.53
LINC01220-201ENST00000558575 KIAA1755Q5JYT7 1200 aa18.34■□□□□ 0.53
LINC01220-201ENST00000558575 ZNF697Q5TEC3 545 aa18.34■□□□□ 0.53
LINC01220-201ENST00000558575 STOX1Q6ZVD7 989 aa18.34■□□□□ 0.53
LINC01220-201ENST00000558575 KIAA1683Q9H0B3 1180 aa18.34■□□□□ 0.53
LINC01220-201ENST00000558575 GJD2Q9UKL4 321 aa18.34■□□□□ 0.53
LINC01220-201ENST00000558575 C19orf81C9J6K1 198 aa18.33■□□□□ 0.52
LINC01220-201ENST00000558575 RANBP6O60518 1105 aaKnown RBP18.33■□□□□ 0.52
LINC01220-201ENST00000558575 NMT2O60551 498 aa18.33■□□□□ 0.52
LINC01220-201ENST00000558575 PCP11498 1178 aaKnown RBP18.33■□□□□ 0.52
LINC01220-201ENST00000558575 ICA1Q05084 483 aa18.33■□□□□ 0.52
LINC01220-201ENST00000558575 RRP12Q5JTH9 1297 aaKnown RBP18.33■□□□□ 0.52
LINC01220-201ENST00000558575 TREML2Q5T2D2 321 aa18.33■□□□□ 0.52
LINC01220-201ENST00000558575 TRIB2Q92519 343 aa18.33■□□□□ 0.52
LINC01220-201ENST00000558575 CEP95Q96GE4 821 aa18.33■□□□□ 0.52
LINC01220-201ENST00000558575 MTMR4Q9NYA4 1195 aa18.33■□□□□ 0.52
LINC01220-201ENST00000558575 TMX2Q9Y320 296 aa18.33■□□□□ 0.52
LINC01220-201ENST00000558575 RLFQ13129 1914 aa18.33■□□□□ 0.52
LINC01220-201ENST00000558575 PLIN4Q96Q06 1357 aa18.32■□□□□ 0.52
LINC01220-201ENST00000558575 SLC27A2O14975 620 aa18.32■□□□□ 0.52
LINC01220-201ENST00000558575 TSPY3P0CV98 308 aa18.32■□□□□ 0.52
LINC01220-201ENST00000558575 TSPY8P0CW00 308 aa18.32■□□□□ 0.52
LINC01220-201ENST00000558575 NOVP48745 357 aa18.32■□□□□ 0.52
LINC01220-201ENST00000558575 COL9A3Q14050 684 aaPredicted RBP18.32■□□□□ 0.52
LINC01220-201ENST00000558575 FAM110CQ1W6H9 321 aa18.32■□□□□ 0.52
LINC01220-201ENST00000558575 RNF41Q9H4P4 317 aaPredicted RBP18.32■□□□□ 0.52
LINC01220-201ENST00000558575 TOMM22Q9NS69 142 aa18.32■□□□□ 0.52
LINC01220-201ENST00000558575 NYAP2Q9P242 653 aa18.32■□□□□ 0.52
LINC01220-201ENST00000558575 B4E1Z4 1266 aa18.31■□□□□ 0.52
LINC01220-201ENST00000558575 ZYXQ15942 572 aaKnown RBP18.31■□□□□ 0.52
LINC01220-201ENST00000558575 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
LINC01220-201ENST00000558575 CREB3L3Q68CJ9 461 aa18.31■□□□□ 0.52
LINC01220-201ENST00000558575 USP17L2Q6R6M4 530 aa18.31■□□□□ 0.52
LINC01220-201ENST00000558575 PROCA1Q8NCQ7 364 aaPredicted RBP18.31■□□□□ 0.52
LINC01220-201ENST00000558575 MKL1Q969V6 931 aa18.31■□□□□ 0.52
LINC01220-201ENST00000558575 C12orf42Q96LP6 360 aa18.31■□□□□ 0.52
LINC01220-201ENST00000558575 ZSWIM5Q9P217 1185 aa18.31■□□□□ 0.52
LINC01220-201ENST00000558575 AGTPBP1Q9UPW5 1226 aa18.31■□□□□ 0.52
LINC01220-201ENST00000558575 GREB1LQ9C091 1923 aaPredicted RBP18.31■□□□□ 0.52
LINC01220-201ENST00000558575 TSPY2A6NKD2 308 aa18.3■□□□□ 0.52
LINC01220-201ENST00000558575 E7EWF7 191 aa18.3■□□□□ 0.52
LINC01220-201ENST00000558575 KDM4AO75164 1064 aa18.3■□□□□ 0.52
LINC01220-201ENST00000558575 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
LINC01220-201ENST00000558575 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
LINC01220-201ENST00000558575 MYLIPQ8WY64 445 aa18.3■□□□□ 0.52
LINC01220-201ENST00000558575 TCP11L1Q9NUJ3 509 aa18.3■□□□□ 0.52
LINC01220-201ENST00000558575 CLIP2Q9UDT6 1046 aa18.3■□□□□ 0.52
LINC01220-201ENST00000558575 RCSD1Q6JBY9 416 aa18.29■□□□□ 0.52
LINC01220-201ENST00000558575 CYB5R4Q7L1T6 521 aa18.29■□□□□ 0.52
LINC01220-201ENST00000558575 FEZ1Q99689 392 aa18.29■□□□□ 0.52
LINC01220-201ENST00000558575 SEMA6BQ9H3T3 888 aa18.29■□□□□ 0.52
LINC01220-201ENST00000558575 ARHGEF10LQ9HCE6 1279 aa18.29■□□□□ 0.52
LINC01220-201ENST00000558575 TMOD4Q9NZQ9 345 aa18.29■□□□□ 0.52
LINC01220-201ENST00000558575 TTLL1O95922 423 aa18.28■□□□□ 0.52
LINC01220-201ENST00000558575 PRKAR2AP13861 404 aaKnown RBP18.28■□□□□ 0.52
LINC01220-201ENST00000558575 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
LINC01220-201ENST00000558575 USP14P54578 494 aa18.28■□□□□ 0.52
LINC01220-201ENST00000558575 ESR2Q92731 530 aa18.28■□□□□ 0.52
LINC01220-201ENST00000558575 KCNB2Q92953 911 aa18.28■□□□□ 0.52
LINC01220-201ENST00000558575 ZKSCAN3Q9BRR0 538 aa18.28■□□□□ 0.52
LINC01220-201ENST00000558575 USP26Q9BXU7 913 aa18.28■□□□□ 0.52
LINC01220-201ENST00000558575 TTYH1Q9H313 450 aaPredicted RBP18.28■□□□□ 0.52
LINC01220-201ENST00000558575 VCPKMTQ9H867 229 aa18.28■□□□□ 0.52
LINC01220-201ENST00000558575 MYH8P13535 1937 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms