RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 R3HDMLQ9H3Y0 253 aa20.46■□□□□ 0.87
TPM1-214ENST00000558544 ISY1Q9ULR0 285 aaKnown RBP20.46■□□□□ 0.87
TPM1-214ENST00000558544 EXOSC10Q01780 885 aaKnown RBP20.46■□□□□ 0.87
TPM1-214ENST00000558544 SMCR8Q8TEV9 937 aaPredicted RBP20.46■□□□□ 0.87
TPM1-214ENST00000558544 MTA3Q9BTC8 594 aa20.46■□□□□ 0.87
TPM1-214ENST00000558544 CFHR5Q9BXR6 569 aa20.46■□□□□ 0.87
TPM1-214ENST00000558544 LY9Q9HBG7 655 aa20.46■□□□□ 0.87
TPM1-214ENST00000558544 WDR19Q8NEZ3 1342 aa20.45■□□□□ 0.86
TPM1-214ENST00000558544 MGAMO43451 1857 aa20.45■□□□□ 0.86
TPM1-214ENST00000558544 SLC1A4P43007 532 aa20.45■□□□□ 0.86
TPM1-214ENST00000558544 ANAPC15P60006 121 aa20.45■□□□□ 0.86
TPM1-214ENST00000558544 CCDC96Q2M329 555 aa20.45■□□□□ 0.86
TPM1-214ENST00000558544 SAMD1Q6SPF0 538 aaPredicted RBP20.45■□□□□ 0.86
TPM1-214ENST00000558544 GMCL1Q96IK5 515 aa20.45■□□□□ 0.86
TPM1-214ENST00000558544 P2RX7Q99572 595 aaKnown RBP20.45■□□□□ 0.86
TPM1-214ENST00000558544 BACH2Q9BYV9 841 aa20.45■□□□□ 0.86
TPM1-214ENST00000558544 ZSWIM8A7E2V4 1837 aa20.45■□□□□ 0.86
TPM1-214ENST00000558544 ADGRA2Q96PE1 1338 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 FOXN1O15353 648 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 FLOT1O75955 427 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 PDHBP11177 359 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 BMP3P12645 472 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 RPS6KB1P23443 525 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 HERVK_113P62684 666 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 KCTD1Q719H9 257 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 DCAF4Q8WV16 495 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 FBXO28Q9NVF7 368 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 CASP8AP2Q9UKL3 1982 aa20.44■□□□□ 0.86
TPM1-214ENST00000558544 MYH6P13533 1939 aa20.43■□□□□ 0.86
TPM1-214ENST00000558544 TLR2O60603 784 aa20.43■□□□□ 0.86
TPM1-214ENST00000558544 RUFY3Q7L099 469 aa20.43■□□□□ 0.86
TPM1-214ENST00000558544 C22orf23Q9BZE7 217 aa20.43■□□□□ 0.86
TPM1-214ENST00000558544 UPF3BQ9BZI7 483 aaKnown RBP20.43■□□□□ 0.86
TPM1-214ENST00000558544 TM6SF1Q9BZW5 370 aa20.43■□□□□ 0.86
TPM1-214ENST00000558544 UPF2Q9HAU5 1272 aaKnown RBP20.43■□□□□ 0.86
TPM1-214ENST00000558544 ZSWIM6Q9HCJ5 1215 aa20.43■□□□□ 0.86
TPM1-214ENST00000558544 CPA4Q9UI42 421 aa20.43■□□□□ 0.86
TPM1-214ENST00000558544 FRMPD2Q68DX3 1309 aaPredicted RBP20.42■□□□□ 0.86
TPM1-214ENST00000558544 SPDYE16A6NNV3 312 aaPredicted RBP20.42■□□□□ 0.86
TPM1-214ENST00000558544 SNHG28P0DPA3 235 aa20.42■□□□□ 0.86
TPM1-214ENST00000558544 NFXL1Q6ZNB6 911 aa20.42■□□□□ 0.86
TPM1-214ENST00000558544 Q6ZUG5 572 aa20.42■□□□□ 0.86
TPM1-214ENST00000558544 CYP46A1Q9Y6A2 500 aa20.42■□□□□ 0.86
TPM1-214ENST00000558544 CCDC69A6NI79 296 aa20.41■□□□□ 0.86
TPM1-214ENST00000558544 TMEM232C9JQI7 657 aa20.41■□□□□ 0.86
TPM1-214ENST00000558544 DSG3P32926 999 aa20.41■□□□□ 0.86
TPM1-214ENST00000558544 LIFRP42702 1097 aa20.41■□□□□ 0.86
TPM1-214ENST00000558544 FGD1P98174 961 aa20.41■□□□□ 0.86
TPM1-214ENST00000558544 COG2Q14746 738 aa20.41■□□□□ 0.86
TPM1-214ENST00000558544 SLF1Q9BQI6 1058 aa20.41■□□□□ 0.86
TPM1-214ENST00000558544 HSPA8P11142 646 aaKnown RBP20.4■□□□□ 0.86
TPM1-214ENST00000558544 STAT2P52630 851 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 ZNF543Q08ER8 600 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 IKQ13123 557 aaPredicted RBP20.4■□□□□ 0.86
TPM1-214ENST00000558544 C17orf99Q6UX52 265 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 CATIPQ7Z7H3 387 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 ZNF654Q8IZM8 581 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 ATG4CQ96DT6 458 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 IL17RAQ96F46 866 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 PAGR1Q9BTK6 254 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 MYL10Q9BUA6 226 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 GPCPD1Q9NPB8 672 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 FEM1BQ9UK73 627 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 PPP1R9AQ9ULJ8 1098 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 MYPNQ86TC9 1320 aa20.4■□□□□ 0.86
TPM1-214ENST00000558544 GPR25O00155 361 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 PEX10O60683 326 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 GOLGA8HP0CJ92 632 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 BCRP11274 1271 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 GCLCP48506 637 aaPredicted RBP20.39■□□□□ 0.85
TPM1-214ENST00000558544 TTBK2Q6IQ55 1244 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 POTEEQ6S8J3 1075 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 SGMS1Q86VZ5 419 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 TMTC2Q8N394 836 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 ANKRD13CQ8N6S4 541 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 NUP133Q8WUM0 1156 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 KIFC2Q96AC6 838 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 HOXC10Q9NYD6 342 aa20.39■□□□□ 0.85
TPM1-214ENST00000558544 PARP1P09874 1014 aaKnown RBP20.38■□□□□ 0.85
TPM1-214ENST00000558544 CTCFP49711 727 aaPredicted RBP20.38■□□□□ 0.85
TPM1-214ENST00000558544 RBM25P49756 843 aaKnown RBP20.38■□□□□ 0.85
TPM1-214ENST00000558544 TROAPQ12815 778 aa20.38■□□□□ 0.85
TPM1-214ENST00000558544 LBX2Q6XYB7 198 aa20.38■□□□□ 0.85
TPM1-214ENST00000558544 RAB11FIP4Q86YS3 637 aa20.38■□□□□ 0.85
TPM1-214ENST00000558544 GTF3C2Q8WUA4 911 aaPredicted RBP20.38■□□□□ 0.85
TPM1-214ENST00000558544 BRF1Q92994 677 aa20.38■□□□□ 0.85
TPM1-214ENST00000558544 TXNRD2Q9NNW7 524 aa20.38■□□□□ 0.85
TPM1-214ENST00000558544 SLC12A7Q9Y666 1083 aa20.38■□□□□ 0.85
TPM1-214ENST00000558544 BAZ2BQ9UIF8 2168 aaKnown RBP20.37■□□□□ 0.85
TPM1-214ENST00000558544 DDAH1O94760 285 aa20.37■□□□□ 0.85
TPM1-214ENST00000558544 RXRAP19793 462 aa20.37■□□□□ 0.85
TPM1-214ENST00000558544 SLC16A2P36021 539 aa20.37■□□□□ 0.85
TPM1-214ENST00000558544 GRM4Q14833 912 aa20.37■□□□□ 0.85
TPM1-214ENST00000558544 ASPRV1Q53RT3 343 aa20.37■□□□□ 0.85
TPM1-214ENST00000558544 GPATCH4Q5T3I0 446 aaKnown RBP20.37■□□□□ 0.85
TPM1-214ENST00000558544 FAM160B2Q86V87 743 aa20.37■□□□□ 0.85
TPM1-214ENST00000558544 PRPF38AQ8NAV1 312 aaKnown RBP20.37■□□□□ 0.85
TPM1-214ENST00000558544 CHURC1Q8WUH1 139 aa20.37■□□□□ 0.85
TPM1-214ENST00000558544 PDRG1Q9NUG6 133 aa20.37■□□□□ 0.85
TPM1-214ENST00000558544 RBPJLQ9UBG7 517 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms