RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 ASCC2Q9H1I8 757 aaPredicted RBP6.73□□□□□ -1.33
PDE8A-209ENST00000558543 GPR160Q9UJ42 338 aa6.73□□□□□ -1.33
PDE8A-209ENST00000558543 RGS13O14921 159 aa6.72□□□□□ -1.33
PDE8A-209ENST00000558543 RPL10P27635 214 aaKnown RBP6.72□□□□□ -1.33
PDE8A-209ENST00000558543 EIF4A3P38919 411 aaKnown RBP6.72□□□□□ -1.33
PDE8A-209ENST00000558543 MLECQ14165 292 aa6.72□□□□□ -1.33
PDE8A-209ENST00000558543 KCNA10Q16322 511 aa6.72□□□□□ -1.33
PDE8A-209ENST00000558543 NAALADL2Q58DX5 795 aa6.72□□□□□ -1.33
PDE8A-209ENST00000558543 LILRA2Q8N149 483 aa6.72□□□□□ -1.33
PDE8A-209ENST00000558543 CD320Q9NPF0 282 aa6.72□□□□□ -1.33
PDE8A-209ENST00000558543 SUPT16HQ9Y5B9 1047 aaKnown RBP6.72□□□□□ -1.33
PDE8A-209ENST00000558543 PSPNO60542 156 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 HMGB1P09429 215 aaKnown RBP6.71□□□□□ -1.34
PDE8A-209ENST00000558543 PDE6BP35913 854 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 SNW1Q13573 536 aaKnown RBP6.71□□□□□ -1.34
PDE8A-209ENST00000558543 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 SEZ6Q53EL9 994 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 OVOS1Q6IE37 1185 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 TMC3Q7Z5M5 1100 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 SIRT2Q8IXJ6 389 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 TMEM87AQ8NBN3 555 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 ZNF296Q8WUU4 475 aaPredicted RBP6.71□□□□□ -1.34
PDE8A-209ENST00000558543 VWCEQ96DN2 955 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 INTS4Q96HW7 963 aaKnown RBP6.71□□□□□ -1.34
PDE8A-209ENST00000558543 ZNF512BQ96KM6 892 aaPredicted RBP6.71□□□□□ -1.34
PDE8A-209ENST00000558543 SLC26A8Q96RN1 970 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 FOXP3Q9BZS1 431 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 SLC6A17Q9H1V8 727 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 METTL5Q9NRN9 209 aaKnown RBP6.71□□□□□ -1.34
PDE8A-209ENST00000558543 GMIPQ9P107 970 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 GGT7Q9UJ14 662 aa6.71□□□□□ -1.34
PDE8A-209ENST00000558543 SMG5Q9UPR3 1016 aaKnown RBP6.71□□□□□ -1.34
PDE8A-209ENST00000558543 YBX2Q9Y2T7 364 aaKnown RBP6.71□□□□□ -1.34
PDE8A-209ENST00000558543 FKTNO75072 461 aa6.7□□□□□ -1.34
PDE8A-209ENST00000558543 USP2O75604 605 aaPredicted RBP6.7□□□□□ -1.34
PDE8A-209ENST00000558543 DUSP4Q13115 394 aa6.7□□□□□ -1.34
PDE8A-209ENST00000558543 GK5Q6ZS86 529 aa6.7□□□□□ -1.34
PDE8A-209ENST00000558543 WAPLQ7Z5K2 1190 aa6.7□□□□□ -1.34
PDE8A-209ENST00000558543 HDAC8Q9BY41 377 aa6.7□□□□□ -1.34
PDE8A-209ENST00000558543 UBP1Q9NZI7 540 aa6.7□□□□□ -1.34
PDE8A-209ENST00000558543 ZMYM5Q9UJ78 669 aa6.7□□□□□ -1.34
PDE8A-209ENST00000558543 GREM1O60565 184 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 EFEMP2O95967 443 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 GLDCP23378 1020 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 MCM4P33991 863 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 RNF4P78317 190 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 CHRNEQ04844 493 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 NR0B2Q15466 257 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 CIAPIN1Q6FI81 312 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 SPPL2CQ8IUH8 684 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 USHBP1Q8N6Y0 703 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 ANKS4BQ8N8V4 417 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 UBXN4Q92575 508 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 TCTN2Q96GX1 697 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 G6PC3Q9BUM1 346 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 LRRC3Q9BY71 257 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 MCOLN1Q9GZU1 580 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 ANTXR1Q9H6X2 564 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 ADAMTS1Q9UHI8 967 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 MINPP1Q9UNW1 487 aa6.69□□□□□ -1.34
PDE8A-209ENST00000558543 MYOCOSA0A1B0GUC4 107 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 NUAK1O60285 661 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 LINC00310P59036 64 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 HDLBPQ00341 1268 aaKnown RBP6.68□□□□□ -1.34
PDE8A-209ENST00000558543 CLCQ05315 142 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 NBPF12Q5TAG4 269 aaPredicted RBP6.68□□□□□ -1.34
PDE8A-209ENST00000558543 TMEM132EQ6IEE7 984 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 ZPBP2Q6X784 338 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 HS2ST1Q7LGA3 356 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 IRF2BP1Q8IU81 584 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 SYTL5Q8TDW5 730 aaPredicted RBP6.68□□□□□ -1.34
PDE8A-209ENST00000558543 LINC01599Q8WXQ3 324 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 RNF34Q969K3 372 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 SHISA4Q96DD7 197 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 SGPP1Q9BX95 441 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 IRF2BPLQ9H1B7 796 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 CWC22Q9HCG8 908 aaKnown RBP6.68□□□□□ -1.34
PDE8A-209ENST00000558543 KCNQ5Q9NR82 932 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 TCFL5Q9UL49 500 aa6.68□□□□□ -1.34
PDE8A-209ENST00000558543 SSU72P8A0A1W2PR75 194 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 NOTOA8MTQ0 251 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 MEIS1O00470 390 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 ATE1O95260 518 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 PRAMEF1O95521 474 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 SYPP08247 313 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 APOBRQ0VD83 1088 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 NBPF9Q3BBW0 867 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 RNF111Q6ZNA4 994 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 ATG4CQ96DT6 458 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.67□□□□□ -1.34
PDE8A-209ENST00000558543 ROBO2Q9HCK4 1378 aa6.67□□□□□ -1.34
PDE8A-209ENST00000558543 TMEM82A0PJX8 343 aa6.66□□□□□ -1.34
PDE8A-209ENST00000558543 FAM86C2PA6NEL3 165 aa6.66□□□□□ -1.34
PDE8A-209ENST00000558543 CLEC3AO75596 197 aa6.66□□□□□ -1.34
PDE8A-209ENST00000558543 SDHBP21912 280 aa6.66□□□□□ -1.34
PDE8A-209ENST00000558543 ZNF76P36508 570 aa6.66□□□□□ -1.34
PDE8A-209ENST00000558543 PCBP3P57721 371 aaKnown RBP6.66□□□□□ -1.34
PDE8A-209ENST00000558543 DLG4P78352 724 aa6.66□□□□□ -1.34
PDE8A-209ENST00000558543 SLC14A2Q15849 920 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms