RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ACRBPQ8NEB7 543 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 TTLL11Q8NHH1 800 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 STRBPQ96SI9 672 aaKnown RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 MAP3K14Q99558 947 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 ZNF287Q9HBT7 754 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 GOPCQ9HD26 462 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 MAGEC2Q9UBF1 373 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 TRMT112Q9UI30 125 aaKnown RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 ZNF215Q9UL58 517 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 PCDHGA4Q9Y5G9 962 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 TAF6LQ9Y6J9 622 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 SHANK3Q9BYB0 1731 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 SOS2Q07890 1332 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 ZNF532Q9HCE3 1301 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 COL14A1Q05707 1796 aaKnown RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 NUP98P52948 1817 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 RIC1Q4ADV7 1423 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 RREB1Q92766 1687 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC151A5D8V7 595 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 A6NNZ2 444 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 PRPF3O43395 683 aaKnown RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 CAND2O75155 1236 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 URI1O94763 535 aaPredicted RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 PECAM1P16284 738 aaPredicted RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 LMOD1P29536 600 aaPredicted RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 NF2P35240 595 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 ACTN2P35609 894 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 GNAQP50148 359 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 RPS6KA3P51812 740 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 MRPL12P52815 198 aaKnown RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 SESN3P58005 492 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 ANTXR2P58335 489 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 HAND2P61296 217 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 MORC3Q14149 939 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 NCAPHQ15003 741 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 TUBB8Q3ZCM7 444 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 LONRF3Q496Y0 759 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 E4F1Q66K89 784 aaPredicted RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 ARL6IP4Q66PJ3 421 aaKnown RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 ARMCX5Q6P1M9 558 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 OTUD6AQ7L8S5 288 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 MICU3Q86XE3 530 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 APLFQ8IW19 511 aaPredicted RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 FAM114A1Q8IWE2 563 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 DIS3L2Q8IYB7 885 aaKnown RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 ANKRD13AQ8IZ07 590 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 FANCBQ8NB91 859 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 IGDCC4Q8TDY8 1250 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 HNRNPLLQ8WVV9 542 aaKnown RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 PIK3R5Q8WYR1 880 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 RUBCNQ92622 972 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 TEKT1Q969V4 418 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC102AQ96A19 550 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 NUP58Q9BVL2 599 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 BRIP1Q9BX63 1249 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 SLC26A6Q9BXS9 759 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 PUS7LQ9H0K6 701 aaKnown RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 CUEDC2Q9H467 287 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 LY9Q9HBG7 655 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 SH3GLB2Q9NR46 395 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 TRMT1Q9NXH9 659 aaKnown RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 MYO6Q9UM54 1294 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 PPP2R2CQ9Y2T4 447 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.17□□□□□ -1.42
GABPB1-207ENST00000558335 ITGB4P16144 1822 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 ECM29Q5VYK3 1845 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 ZNF831Q5JPB2 1677 aa6.17□□□□□ -1.42
GABPB1-207ENST00000558335 BCORQ6W2J9 1755 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 DLEC1Q9Y238 1755 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 DUOX1Q9NRD9 1551 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 B4E1Z4 1266 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 SMAPO00193 183 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 NEBLO76041 1014 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 FGFR1OPO95684 399 aaKnown RBP6.16□□□□□ -1.42
GABPB1-207ENST00000558335 MYBL2P10244 700 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 FGFR2P21802 821 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 YY1P25490 414 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 LONP1P36776 959 aaKnown RBP6.16□□□□□ -1.42
GABPB1-207ENST00000558335 MCAMP43121 646 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 SARSP49591 514 aaKnown RBP6.16□□□□□ -1.42
GABPB1-207ENST00000558335 MNAT1P51948 309 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 GNG11P61952 73 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 MAP3K9P80192 1104 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 CKAP4Q07065 602 aaKnown RBP6.16□□□□□ -1.42
GABPB1-207ENST00000558335 TBX2Q13207 712 aaPredicted RBP6.16□□□□□ -1.42
GABPB1-207ENST00000558335 NTRK3Q16288 839 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 DBN1Q16643 649 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 WHAMMP3Q1A5X7 153 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 PUS10Q3MIT2 529 aaKnown RBP6.16□□□□□ -1.42
GABPB1-207ENST00000558335 TBC1D10BQ4KMP7 808 aaPredicted RBP6.16□□□□□ -1.42
GABPB1-207ENST00000558335 ARHGAP29Q52LW3 1261 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 CAVIN4Q5BKX8 364 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 SHC4Q6S5L8 630 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 CYP26C1Q6V0L0 522 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 TAX1BP1Q86VP1 789 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 NCAPG2Q86XI2 1143 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 ANKRD13BQ86YJ7 626 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC50Q8IVM0 306 aa6.16□□□□□ -1.42
GABPB1-207ENST00000558335 CRACR2BQ8N4Y2 399 aaPredicted RBP6.16□□□□□ -1.42
GABPB1-207ENST00000558335 PDILTQ8N807 584 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms