RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 METTL5Q9NRN9 209 aaKnown RBP5.69□□□□□ -1.5
LRRC28-205ENST00000558248 KCNH3Q9ULD8 1083 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 CEP131Q9UPN4 1083 aa5.69□□□□□ -1.5
LRRC28-205ENST00000558248 TMA7Q9Y2S6 64 aaKnown RBP5.69□□□□□ -1.5
LRRC28-205ENST00000558248 PRR33A8MZF0 331 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 H3BS24 57 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 GARTP22102 1010 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 WFDC3Q8IUB2 231 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 KIAA0825Q8IV33 1275 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 FBXO27Q8NI29 283 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 CCDC74BQ96LY2 380 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 BACH2Q9BYV9 841 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 TRIT1Q9H3H1 467 aaKnown RBP5.68□□□□□ -1.5
LRRC28-205ENST00000558248 LMCD1Q9NZU5 365 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 POLR3KQ9Y2Y1 108 aaPredicted RBP5.68□□□□□ -1.5
LRRC28-205ENST00000558248 PREX1Q8TCU6 1659 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 ZNF335Q9H4Z2 1342 aaPredicted RBP5.68□□□□□ -1.5
LRRC28-205ENST00000558248 SIGLEC1Q9BZZ2 1709 aa5.68□□□□□ -1.5
LRRC28-205ENST00000558248 KIF27Q86VH2 1401 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 FANCAO15360 1455 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 NEO1Q92859 1461 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 PLEKHD1A6NEE1 506 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 UPK3BL1B0FP48 263 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 UPK3BL2E5RIL1 263 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 GREM1O60565 184 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 RAG1P15918 1043 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 ATG4DQ86TL0 474 aaPredicted RBP5.67□□□□□ -1.5
LRRC28-205ENST00000558248 NOP9Q86U38 636 aaKnown RBP5.67□□□□□ -1.5
LRRC28-205ENST00000558248 USP48Q86UV5 1035 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 KRTAP1-3Q8IUG1 177 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 DNAJB8Q8NHS0 232 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 CCDC120Q96HB5 630 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 SPON2Q9BUD6 331 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 RGS17Q9UGC6 210 aaPredicted RBP5.67□□□□□ -1.5
LRRC28-205ENST00000558248 RNF114Q9Y508 228 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 PCDHB14Q9Y5E9 798 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 UGGT2Q9NYU1 1516 aa5.67□□□□□ -1.5
LRRC28-205ENST00000558248 UHRF1BP1Q6BDS2 1440 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 AKNAQ7Z591 1439 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 SETD1BQ9UPS6 1966 aaKnown RBP5.66□□□□□ -1.5
LRRC28-205ENST00000558248 MARCH6O60337 910 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 RNASE1P07998 156 aaKnown RBP5.66□□□□□ -1.5
LRRC28-205ENST00000558248 ITGB5P18084 799 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 ERCC5P28715 1186 aaPredicted RBP5.66□□□□□ -1.5
LRRC28-205ENST00000558248 GBP1P32455 592 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 MCM4P33991 863 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 TXKP42681 527 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 ZNF165P49910 485 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 SEZ6Q53EL9 994 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 TAF7LQ5H9L4 462 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 GIMAP6Q6P9H5 292 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 TMPRSS7Q7RTY8 843 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 RNF141Q8WVD5 230 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 RNF34Q969K3 372 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 ASPNQ9BXN1 380 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 CARS2Q9HA77 564 aaKnown RBP5.66□□□□□ -1.5
LRRC28-205ENST00000558248 BRMS1Q9HCU9 246 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 ATP13A1Q9HD20 1204 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 MBNL3Q9NUK0 354 aaKnown RBP5.66□□□□□ -1.5
LRRC28-205ENST00000558248 GPATCH2Q9NW75 528 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 UBP1Q9NZI7 540 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 GMIPQ9P107 970 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 ZSWIM5Q9P217 1185 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 ADAMTS1Q9UHI8 967 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 ST14Q9Y5Y6 855 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 TTC37Q6PGP7 1564 aa5.66□□□□□ -1.5
LRRC28-205ENST00000558248 DENND4BO75064 1496 aaPredicted RBP5.65□□□□□ -1.5
LRRC28-205ENST00000558248 FER1L4A9Z1Z3 1794 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 ARHGEF40Q8TER5 1519 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 ABCA8O94911 1581 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 CHURC1-FNTBB4DL54 471 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 SCAMP3O14828 347 aaKnown RBP5.65□□□□□ -1.5
LRRC28-205ENST00000558248 RNF4P78317 190 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 FANCCQ00597 558 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 TNK2Q07912 1038 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 LRRFIP1Q32MZ4 808 aaKnown RBP5.65□□□□□ -1.5
LRRC28-205ENST00000558248 DPH6Q7L8W6 267 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 TICAM2Q86XR7 235 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 REXO1Q8N1G1 1221 aaKnown RBP5.65□□□□□ -1.5
LRRC28-205ENST00000558248 LRRN4CLQ8ND94 238 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 MICAL1Q8TDZ2 1067 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 NKD1Q969G9 470 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 UBE2FQ969M7 185 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 SYTL4Q96C24 671 aaPredicted RBP5.65□□□□□ -1.5
LRRC28-205ENST00000558248 NT5C1AQ9BXI3 368 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 ASCC2Q9H1I8 757 aaPredicted RBP5.65□□□□□ -1.5
LRRC28-205ENST00000558248 SEMA3GQ9NS98 782 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 ADAMTS6Q9UKP5 1117 aa5.65□□□□□ -1.5
LRRC28-205ENST00000558248 KIAA0556O60303 1618 aa5.65□□□□□ -1.51
LRRC28-205ENST00000558248 CNTNAP4Q9C0A0 1308 aa5.65□□□□□ -1.51
LRRC28-205ENST00000558248 ATP10BO94823 1461 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 ABCA9Q8IUA7 1624 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 CLSTN1O94985 981 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 ATE1O95260 518 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 CRKP46108 304 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 GK5Q6ZS86 529 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 DTWD2Q8NBA8 298 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 PPP1R13LQ8WUF5 828 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 KREMEN1Q96MU8 473 aa5.64□□□□□ -1.51
LRRC28-205ENST00000558248 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms