RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 BAG4O95429 457 aaKnown RBP13.42□□□□□ -0.26
RORA-207ENST00000558234 GJB2P29033 226 aa13.42□□□□□ -0.26
RORA-207ENST00000558234 HUNKP57058 714 aa13.42□□□□□ -0.26
RORA-207ENST00000558234 LPAR1Q92633 364 aa13.42□□□□□ -0.26
RORA-207ENST00000558234 TSPY2A6NKD2 308 aa13.42□□□□□ -0.26
RORA-207ENST00000558234 ANKRD23Q86SG2 305 aa13.42□□□□□ -0.26
RORA-207ENST00000558234 CNMDO75829 334 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 MTMR2Q13614 643 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 TREML2Q5T2D2 321 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 APOA5Q6Q788 366 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 DCAF4Q8WV16 495 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 CSADQ9Y600 493 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 RANBP6O60518 1105 aaKnown RBP13.41□□□□□ -0.26
RORA-207ENST00000558234 NDUFB10O96000 172 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 VCAM1P19320 739 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 ZKSCAN3Q9BRR0 538 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
RORA-207ENST00000558234 SMARCA1P28370 1054 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 AS3MTQ9HBK9 375 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 AGTPBP1Q9UPW5 1226 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 ZHX2Q9Y6X8 837 aa13.41□□□□□ -0.26
RORA-207ENST00000558234 USP17L10C9JJH3 530 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
RORA-207ENST00000558234 PRKG1Q13976 671 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 CCDC102AQ96A19 550 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 CDC27P30260 824 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 ADD1P35611 737 aaKnown RBP13.4□□□□□ -0.26
RORA-207ENST00000558234 CATSPERGQ6ZRH7 1159 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 STK11IPQ8N1F8 1099 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 SHISA4Q96DD7 197 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 LMBRD1Q9NUN5 540 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 JAK2O60674 1132 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 ZNF543Q08ER8 600 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 JMYQ8N9B5 988 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 PICK1Q9NRD5 415 aa13.4□□□□□ -0.26
RORA-207ENST00000558234 WDR46O15213 610 aaKnown RBP13.39□□□□□ -0.27
RORA-207ENST00000558234 GTF2A2P52657 109 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 F5H6K3 240 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 IGHA2P01877 340 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
RORA-207ENST00000558234 VEGFBP49765 207 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 GHRHRQ02643 423 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 KLRC3Q07444 240 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
RORA-207ENST00000558234 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 CABP5Q9NP86 173 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 ZNF536O15090 1300 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 ATP2A1O14983 1001 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 CYTH3O43739 400 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 STX6O43752 255 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 ZSCAN22P10073 491 aaPredicted RBP13.39□□□□□ -0.27
RORA-207ENST00000558234 NOL8Q76FK4 1167 aaKnown RBP13.39□□□□□ -0.27
RORA-207ENST00000558234 IQCA1Q86XH1 822 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 RIOX1Q9H6W3 641 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 ZNF408Q9H9D4 720 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 CLIP2Q9UDT6 1046 aa13.39□□□□□ -0.27
RORA-207ENST00000558234 WDR33Q9C0J8 1336 aaKnown RBP13.38□□□□□ -0.27
RORA-207ENST00000558234 USP14P54578 494 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 SPP2Q13103 211 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 SNAPC2Q13487 334 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 ZNF654Q8IZM8 581 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 TMTC2Q8N394 836 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 PNMA1Q8ND90 353 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 SLC10A4Q96EP9 437 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 ARHGEF10LQ9HCE6 1279 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 STK36Q9NRP7 1315 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 BTBD19C9JJ37 291 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 MAP2K2P36507 400 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 WTAPQ15007 396 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 RALYLQ86SE5 291 aaKnown RBP13.38□□□□□ -0.27
RORA-207ENST00000558234 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
RORA-207ENST00000558234 FAM43AQ8N2R8 423 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 CHAMP1Q96JM3 812 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 RANBP17Q9H2T7 1088 aaKnown RBP13.38□□□□□ -0.27
RORA-207ENST00000558234 CNTNAP5Q8WYK1 1306 aa13.38□□□□□ -0.27
RORA-207ENST00000558234 MANSC4A6NHS7 340 aaPredicted RBP13.37□□□□□ -0.27
RORA-207ENST00000558234 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
RORA-207ENST00000558234 TMEM67Q5HYA8 995 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 CYP4F22Q6NT55 531 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 CAPNS2Q96L46 248 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 TRIM34Q9BYJ4 488 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 F13A1P00488 732 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 TRDNQ13061 729 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 DEFB115Q30KQ5 88 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 RRP12Q5JTH9 1297 aaKnown RBP13.37□□□□□ -0.27
RORA-207ENST00000558234 DTNBO60941 627 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 CETPP11597 493 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 ZNF157P51786 506 aaPredicted RBP13.37□□□□□ -0.27
RORA-207ENST00000558234 HTRA3P83110 453 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 RESTQ13127 1097 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 IFIT1BQ5T764 474 aaKnown RBP13.37□□□□□ -0.27
RORA-207ENST00000558234 SH2D4AQ9H788 454 aa13.37□□□□□ -0.27
RORA-207ENST00000558234 NCOA5Q9HCD5 579 aaKnown RBP13.37□□□□□ -0.27
RORA-207ENST00000558234 IFIT3O14879 490 aaKnown RBP13.36□□□□□ -0.27
RORA-207ENST00000558234 HMGCS2P54868 508 aa13.36□□□□□ -0.27
RORA-207ENST00000558234 INHBEP58166 350 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms