RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 RNF208Q9H0X6 261 aa10.21□□□□□ -0.77
SHC4-205ENST00000558220 DHX36Q9H2U1 1008 aaKnown RBP10.21□□□□□ -0.77
SHC4-205ENST00000558220 AS3MTQ9HBK9 375 aa10.21□□□□□ -0.77
SHC4-205ENST00000558220 GPR108Q9NPR9 543 aa10.21□□□□□ -0.77
SHC4-205ENST00000558220 DDX4Q9NQI0 724 aaKnown RBP10.21□□□□□ -0.77
SHC4-205ENST00000558220 HMG20BQ9P0W2 317 aa10.21□□□□□ -0.77
SHC4-205ENST00000558220 LRP2BPQ9P2M1 347 aa10.21□□□□□ -0.77
SHC4-205ENST00000558220 AGTPBP1Q9UPW5 1226 aa10.21□□□□□ -0.77
SHC4-205ENST00000558220 TRIM75PA6NK02 468 aa10.2□□□□□ -0.78
SHC4-205ENST00000558220 CCL5P13501 91 aa10.2□□□□□ -0.78
SHC4-205ENST00000558220 TRIM27P14373 513 aa10.2□□□□□ -0.78
SHC4-205ENST00000558220 GCLCP48506 637 aaPredicted RBP10.2□□□□□ -0.78
SHC4-205ENST00000558220 PRKCZQ05513 592 aa10.2□□□□□ -0.78
SHC4-205ENST00000558220 MTFR1Q15390 333 aa10.2□□□□□ -0.78
SHC4-205ENST00000558220 ZNF280CQ8ND82 737 aa10.2□□□□□ -0.78
SHC4-205ENST00000558220 DPF3Q92784 378 aa10.2□□□□□ -0.78
SHC4-205ENST00000558220 FRAT1Q92837 279 aaPredicted RBP10.2□□□□□ -0.78
SHC4-205ENST00000558220 GINM1Q9NU53 330 aa10.2□□□□□ -0.78
SHC4-205ENST00000558220 PI4KBQ9UBF8 816 aa10.2□□□□□ -0.78
SHC4-205ENST00000558220 NR2E3Q9Y5X4 410 aa10.2□□□□□ -0.78
SHC4-205ENST00000558220 CEP290O15078 2479 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 SOBPA7XYQ1 873 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 USP17L5A8MUK1 530 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 ADCY3O60266 1144 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 SGPL1O95470 568 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 ADH1CP00326 375 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 FLT3LGP49771 235 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 WDR4P57081 412 aaKnown RBP10.19□□□□□ -0.78
SHC4-205ENST00000558220 OS9Q13438 667 aaPredicted RBP10.19□□□□□ -0.78
SHC4-205ENST00000558220 MTMR2Q13614 643 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 FAM110CQ1W6H9 321 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 TTC39AQ5SRH9 613 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 ZKSCAN2Q63HK3 967 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 DESI1Q6ICB0 168 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 CERS3Q8IU89 383 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 FOXP4Q8IVH2 680 aaPredicted RBP10.19□□□□□ -0.78
SHC4-205ENST00000558220 TEX11Q8IYF3 940 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 FOCADQ5VW36 1801 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 LOC285556D6RIA3 1793 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 MAST2Q6P0Q8 1798 aa10.19□□□□□ -0.78
SHC4-205ENST00000558220 ASNSP08243 561 aa10.18□□□□□ -0.78
SHC4-205ENST00000558220 CAP2P40123 477 aa10.18□□□□□ -0.78
SHC4-205ENST00000558220 MCAMP43121 646 aa10.18□□□□□ -0.78
SHC4-205ENST00000558220 SPP2Q13103 211 aa10.18□□□□□ -0.78
SHC4-205ENST00000558220 SH3D19Q5HYK7 790 aa10.18□□□□□ -0.78
SHC4-205ENST00000558220 NAA16Q6N069 864 aaPredicted RBP10.18□□□□□ -0.78
SHC4-205ENST00000558220 TMED8Q6PL24 325 aaPredicted RBP10.18□□□□□ -0.78
SHC4-205ENST00000558220 TBC1D9Q6ZT07 1266 aa10.18□□□□□ -0.78
SHC4-205ENST00000558220 U2AF1L4Q8WU68 220 aaKnown RBP10.18□□□□□ -0.78
SHC4-205ENST00000558220 SHISA4Q96DD7 197 aa10.18□□□□□ -0.78
SHC4-205ENST00000558220 ZNF512BQ96KM6 892 aaPredicted RBP10.18□□□□□ -0.78
SHC4-205ENST00000558220 KLF16Q9BXK1 252 aaPredicted RBP10.18□□□□□ -0.78
SHC4-205ENST00000558220 TRIM34Q9BYJ4 488 aa10.18□□□□□ -0.78
SHC4-205ENST00000558220 GABRQQ9UN88 632 aa10.18□□□□□ -0.78
SHC4-205ENST00000558220 CDK5RAP2Q96SN8 1893 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 PNMA6EA0A0J9YXQ4 647 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 C19orf81C9J6K1 198 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 H0YGN5 161 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 BCAR3O75815 825 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 TFRCP02786 760 aaKnown RBP10.17□□□□□ -0.78
SHC4-205ENST00000558220 FXR1P51114 621 aaKnown RBP eCLIP10.17□□□□□ -0.78
SHC4-205ENST00000558220 ATP8B2P98198 1209 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 TNNI3KQ59H18 835 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 ANKRD13CQ8N6S4 541 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 ZNF384Q8TF68 577 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 CLUAP1Q96AJ1 413 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 WDR18Q9BV38 432 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 TMOD4Q9NZQ9 345 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 FPGT-TNNI3KV9GXZ4 949 aa10.17□□□□□ -0.78
SHC4-205ENST00000558220 MYH1P12882 1939 aa10.16□□□□□ -0.78
SHC4-205ENST00000558220 SURF6O75683 361 aaKnown RBP10.16□□□□□ -0.78
SHC4-205ENST00000558220 FARP2O94887 1054 aaPredicted RBP10.16□□□□□ -0.78
SHC4-205ENST00000558220 INHAP05111 366 aa10.16□□□□□ -0.78
SHC4-205ENST00000558220 HLA-DOAP06340 250 aa10.16□□□□□ -0.78
SHC4-205ENST00000558220 BACE1P56817 501 aa10.16□□□□□ -0.78
SHC4-205ENST00000558220 TREML2Q5T2D2 321 aa10.16□□□□□ -0.78
SHC4-205ENST00000558220 PI16Q6UXB8 463 aa10.16□□□□□ -0.78
SHC4-205ENST00000558220 UBE2Q1Q7Z7E8 422 aa10.16□□□□□ -0.78
SHC4-205ENST00000558220 FTSJ3Q8IY81 847 aaKnown RBP10.16□□□□□ -0.78
SHC4-205ENST00000558220 CRACR2BQ8N4Y2 399 aaPredicted RBP10.16□□□□□ -0.78
SHC4-205ENST00000558220 TMEM57Q8N5G2 664 aa10.16□□□□□ -0.78
SHC4-205ENST00000558220 SSH3Q8TE77 659 aa10.16□□□□□ -0.78
SHC4-205ENST00000558220 GTF3C2Q8WUA4 911 aaPredicted RBP10.16□□□□□ -0.78
SHC4-205ENST00000558220 AATFQ9NY61 560 aaKnown RBP eCLIP10.16□□□□□ -0.78
SHC4-205ENST00000558220 MYO5AQ9Y4I1 1855 aaKnown RBP10.16□□□□□ -0.78
SHC4-205ENST00000558220 FAM196BA6NMK8 535 aa10.15□□□□□ -0.78
SHC4-205ENST00000558220 VSIG8P0DPA2 414 aa10.15□□□□□ -0.78
SHC4-205ENST00000558220 HOXA7P31268 230 aaPredicted RBP10.15□□□□□ -0.78
SHC4-205ENST00000558220 HMGCS2P54868 508 aa10.15□□□□□ -0.78
SHC4-205ENST00000558220 IRX3P78415 501 aaPredicted RBP10.15□□□□□ -0.78
SHC4-205ENST00000558220 METTL16Q86W50 562 aaKnown RBP10.15□□□□□ -0.78
SHC4-205ENST00000558220 FAM174AQ8TBP5 190 aa10.15□□□□□ -0.78
SHC4-205ENST00000558220 SH3RF3Q8TEJ3 882 aaPredicted RBP10.15□□□□□ -0.78
SHC4-205ENST00000558220 TGFBRAP1Q8WUH2 860 aa10.15□□□□□ -0.78
SHC4-205ENST00000558220 DEFB118Q96PH6 123 aa10.15□□□□□ -0.78
SHC4-205ENST00000558220 SLC24A3Q9HC58 644 aa10.15□□□□□ -0.78
SHC4-205ENST00000558220 PAK6Q9NQU5 681 aaPredicted RBP10.15□□□□□ -0.78
SHC4-205ENST00000558220 NOP58Q9Y2X3 529 aaKnown RBP10.15□□□□□ -0.78
SHC4-205ENST00000558220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.15□□□□□ -0.78
SHC4-205ENST00000558220 A0A1W2PPC1 479 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms